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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s211 | supercontig | LSalAtl2s211:905889..910292 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003948 >EMLSAP00000003948 ID=EMLSAP00000003948|Name=EMLSAP00000003948|organism=Lepeophtheirus salmonis|type=polypeptide|length=847bp
MLSGIGRSLFLSRALSSSSKLAAPPLAPKPQPSPSIEHAGIFINNEWRSS
VSGKTFPSINPATEKVICDVQEGDKADXDIAVAAARNAFALGSQWRNTDA
SERGRLLYKLADLIERDREYLASLETLDNGKTFQDSYYVDLDLVIKCYRY
YGGWADKVHGKVIPVDGNFFAYTRHEPVGVAGQIIPWNFPLLMQAWKLAP
ALATGNCVVMKLAEQTPLTGLYIAQLTKEAGFPDGVVNIIPGYGHTAGAA
IVNHPHVDKIAFTGSTAVGKIIQKEAADTLKRXSLELGGKNPSIICDDAD
FDYAVATAHNGLFFNQGQVCCAGSRILVQENIYNDFVEKSVELAKKRVVG
NPFDPNTAQGPQVDQDQYNTVLNYIKLGNNDGAKLVAGGKSVDGHGXFVQ
PTVFADVGDDMRICREEIFGPVQVIQKFKSLEEVVNRANNNNYGLSAGVF
TNDLDKAHYISQSLRAGTVWVNTFNTFCASIPFGGYKESGIGRELGEYGL
QNYTETKCIMTKMIGIQIGPIIMSYRRHTPKKISPMDKKVKPNPRYAGVE
SIVNSGNNIRKEIERMEEIRTFYRFRSDEIFRRIKIQALVRLMVEVAKLE
IQERELNGSNRERRNEVESSLANDMDVISNPYNNNGELIQSVVDHRKQIT
TRSRSDLLSSVGDLMSEANFEGQLSSSICQEDEKFERPFLILDVRPENDF
NENGSIIHAENYPMSRLTRSVNFESQSMLRFKIPGKRKIIVVIDEDESLS
SKLATTLVERGYTNIFMLSGGLKVARILFPEKLIGHFNEKNNCLSSQDEG
DVMYLESLCDEASSRGRSSRLSSYAPSRASVSLTRSHRTIDRFSGLY back to topmRNA from alignment at LSalAtl2s211:905889..910292+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003948-699795 ID=EMLSAT00000003948-699795|Name=EMLSAT00000003948|organism=Lepeophtheirus salmonis|type=mRNA|length=4404bp|location=Sequence derived from alignment at LSalAtl2s211:905889..910292+ (Lepeophtheirus salmonis)
GAAAATCTAATCTCGAGTTAATTCAACTTTTTGTTCGATAATGACTTATA
TCTACAATCTAAATAAAATTTTACTGATTGTTTATCAGTGAATATCACTT
TAATCTTTATTTTCTCAGTTGTACGGCATCATTACATTTTCATGTGGCTA
AGCAAAATATGGATTTTTCTAGAAATCTTGCCCTACGCTGTCGCTGCAAA
CTATAGACAGGAAAGATGCTTTAGTAAATACGGAGAAGCTGAAACAAAAA
AACTAGTGTATTATTATTTTTATATATATTGAAAATTTTAGTTCTGATAT
TATTTTAATATAATATATAACACTGCTGTCGTTAATTGTTATGTTGTCAG
GCATTGGAAGAAGCTTATTCTTGAGCCGTGCTCTGAGTAGTAGCTCTAAA
CTTGCTGCTCCTCCTTTAGCCCCCAAACCTCAACCCTCTCCATCCATCGA
ACATGCTGGAGTACGAATTTTCATACGTTTTGAGACTAGTTTTTAACATA
ACCTGAGTCTGAAAAATAACTAAAGGTTTGAACTTTTCTTCTGTGCTTCG
TTATAGATATTTATCAACAATGAATGGCGTTCCTCTGTTAGTGGTAAAAC
TTTTCCGAGTATCAATCCTGCTACTGAAAAAGTGATTTGCGATGTTCAAG
AAGGCGACAAAGCGGATGMGGATATTGCAGTGGCCGCAGCGAGAAATGCG
TTTGCTTTGGGATCTCAATGGAGAAACACAGATGCATCAGAGAGAGGAAG
GCTTCTTTACAAATTAGCAGATCTCATTGAAAGAGACAGAGAATATCTTG
CTGTAATAATAATATTACATTTAATATTTATATATTTTGCACTTTTTATA
ACTAAAGTATAGTCATTAAATCTTTTTTAGTCCTTAGAAACACTCGATAA
TGGAAAAACTTTCCAGGATTCCTACTACGTGGACTTAGACCTCGTTATCA
AATGCTATCGTTATTATGGAGGATGGGCTGATAAAGTCCATGGAAAAGTA
ATTCCTGTTGATGGCAATTTTTTTGCATATACTCGACATGAGCCTGTGGG
TGTTGCAGGACAGATAATTCCATGGAACTTTCCCTTATTGATGCAGGCCT
GGAAGTTAGCACCTGCTTTGGCTACTGGAAACTGTGTTGTAATGAAGTTG
GCTGAACAAACACCACTGACTGGATTGTATATTGCTCAGTTAACTAAAGA
AGCAGGGTTTCCTGACGGAGTTGTCAATATAATTCCAGGCTATGGACATA
CAGCAGGGGCCGCTATTGTTAATCATCCTCATGTTGATAAGATAGCATTT
ACGGGATCCACAGCAGTTGGGAAAATTATTCAGAAAGAAGCGGCTGATAC
ACTTAAAAGAGNATCTCTTGAGCTTGGTGGAAAGAATCCTAGTATTATTT
GTGATGATGCAGACTTTGATTACGCAGTAGCAACAGCTCATAATGGTTTA
TTTTTTAATCAGGTAATCTATTTGTTCTTTACCACTTAATGAAGAAAGGA
AAAAATAAATTTCTACATTTTACCGTTCATTTATTTAAATATATATATAT
TATTAGGGACAAGTTTGTTGTGCTGGCTCTCGGATCCTCGTTCAAGAGAA
TATTTATAATGACTTTGTTGAAAAATCCGTGGAGCTTGCAAAAAAACGTG
TGGTTGGGAACCCTTTCGACCCTAATACAGCTCAAGGACCTCAAGTAGAT
CAAGATCAGTACAATACTGTCTTAAACTATATTAAGCTTGGAAATAATGA
TGGTGCTAAACTTGTCGCTGGTGGGAAGAGTGTAGATGGACATGGATAKT
TTGTCCAGGTTTATCCCCTCATATTTTTTCAAATAATTTAATTTTCCTGA
TTGTGTTTGATTAGCCAACTGTTTTCGCAGATGTTGGAGATGACATGAGA
ATTTGCAGAGAAGAAATCTTTGGCCCAGTTCAAGTTATTCAGAAATTTAA
ATCTTTGGAGGAAGTAGTAAACAGAGCCAACAACAATAATTATGGTCTTT
CCGCTGGTGTTTTTACCAATGATTTGGATAAAGCACATTATATTTCGCAA
TCTTTACGAGCTGGAACTGTTTGGTAAGAAAGACTATCATTACGTATTAT
ATTGAATTTAATGGTAATTAATGATTAAAATAGGGTTAACACTTTTAATA
CCTTCTGTGCTTCCATTCCTTTTGGTGGTTATAAGGAGTCTGGAATTGGT
AGAGAGTTGGGTGAATATGGTCTTCAAAATTATACAGAAACAAAATGTAT
TATGACAAAGATGATTGGTAAAACTGGATAAACACTTCAGTGTTAATCAA
ATCGTTACAATATAAATTATAATTCTAATTATGATAGATATTTTATTCTT
CATTTTTTAATGCATTTATTTTTGTACTTTACTCTAATTTCTTCAACTAA
ATAATCGCTTTTGCTCACAAAACACACACAAAAATTATGATTGATACTTA
GGATATTATGTATATTAATAAAAAACAATAAATTACTAATAAATCTAATT
TTGCTATCTATATCCGTCTTTAGTTATTTCTTTTTAATGAAAAAGGATTG
AATTTTACTTGTCAACTTKGTATAAGTAATATCGATTAAATATTATTTAT
TAAAAATAGATAAGAAGATAGCTGTAAAATATAGGGAATAGATGTCGCTA
AGGTAGAGGTTCATTCTTGGTATTCAAAATCTCATGATAAAAAGGAGGTA
TAAAAACGACTAGGAGCTGAAGAGCTGACTGTATGGTGTGACGATGGTCG
GTGGTACTTGGGTTTAAAATTCATAAATTCCACTATTGTCATCAAAAAAT
AATATTTATGTAAAAATATAATATATCATAAGGAATTAATAATTAAGGGA
TTCAAATTGGGCCCATCATCATGAGCTATCGAAGGCACACTCCCAAGAAA
ATATCTCCCATGGACAAAAAAGTTAAGCCAAATCCTCGATATGCTGGAGT
GGAGTCTATTGTTAATTCGGGTAATAATATCCGCAAAGAGATTGAAAGGT
AATCATCATTTATTAGTTATTATTTATTACTATTAAAGACTTTATTCAGT
TTGAAATGAATAATTATTTATTAATTATTACTTACAGAATGGAGGAAATT
CGGACATTTTACAGATTTCGGTCCGATGAAATATTTAGAAGAATCAAAAT
TCAGGCTTTAGTCAGGCTAATGGTTGAAGTTGCTAAATTAGAAATCCAAG
AAAGGGAATTAAATGGATCCAATCGTGAGAGAAGAAATGAGGTAAGTGTT
TTGAACAATTAAKAAGCCATACTATTAAGCTGTATGTAGTTAGTTTGATT
CAAGATGTATTTGTTTATTTAAGGTCGAAAGTAGTTTAGCCAATGATATG
GATGTAATCTCTAATCCTTACAATAACAATGGTGAACTTATTCAGTCTGT
TGTTGATCATCGAAAACAGATCACAACTCGCTCTAGATCCGATTTACTCT
CTTCTGTTGGGGATTTAATGAGTGAAGCAAACTTCGAGGGTCAACTCAGC
TCATCAATATGCCAAGAGGACGAAAAGTTTGAAAGACCCTTTTTAATTTT
AGATGTACGACCAGAAAATGATTTTAACGAAAATGGATCTATAATTCATG
CTGAAAACTACCCAATGTCTCGACTCACAAGATCTGTTAACTTTGAATCA
CAGTCAATGTTAAGATTTAAAAGTATTATATTTTTCTCTTTCTTAAAAGA
TTTTTTATTCCTATTTTCCGTATTTTTTGGAACATAGATGTAATATACTC
ACAATTTAGTTCCAGGTAAACGGAAAATAATTGTTGTAATTGATGAGGAT
GAATCCCTAAGTTCCAAATTAGCAACAACCCTCGTAGAAAGAGGATATAC
AAACATATTCATGCTCAGTGGAGGACTTAAGGTTGCTCGTATTTTATTTC
CTGAGAAACTCATTGGACATTTTAATGAAAAGAACAATTGTCTGTCTTCT
CAAGACGAAGGAGATGTTATGTATTTAGAGAGTCTTTGTGATGAAGCTTC
TAGTCGAGGTCGAAGCAGTAGATTGTCTTCATATGCCCCATCTAGGGCAT
CTGTTAGTTTGACCAGATCACATAGGACTATTGATCGATTCAGTGGCTTA
TATTAGTCTCAGTCATGTGATAAATTATATAAAATATTTTTTTAAGTTAT
AACTTTCAACTTTTAAGGCTCTAGTCATGTATCTACACCATTATTGAGGA
ATACAAAAATTGTATTTCCCATTTATATAGAAACGAAGATTGTTAGTCAA
TTTATTTTAAATTATATTAGGTAGGTATATGTTTTTTATTTTGAAGTAGA
AAAATATGAATTTATATTATAAACTATAACGGTTCAAATATATGTTCTAT
TTATGTCTTATTTTTATTCATTCAATATTAAGAATGAAATATCGTAACAA
CACA back to top
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