EMLSAT00000003958, EMLSAT00000003958-699805 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003958
Unique NameEMLSAT00000003958-699805
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s211supercontigLSalAtl2s211:860531..863176 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003958 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003958EMLSAG00000003958-686724Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017159EMLSAE00000017159-726087Lepeophtheirus salmonisexon
EMLSAE00000017160EMLSAE00000017160-726088Lepeophtheirus salmonisexon
EMLSAE00000017161EMLSAE00000017161-726089Lepeophtheirus salmonisexon
EMLSAE00000017162EMLSAE00000017162-726090Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779928auto779928Lepeophtheirus salmonispolypeptide
EMLSAP00000003958EMLSAP00000003958Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003958

>EMLSAP00000003958 ID=EMLSAP00000003958|Name=EMLSAP00000003958|organism=Lepeophtheirus salmonis|type=polypeptide|length=221bp
MNCNLHSGSINLLLCTTLEQDLDKRLRNNTVYCNNRSTLTRKLLGLSPKK
MFNFPNDINRRKLWINAIKRTNWNPTKGLRILPKSMFLPKFLEGSWRSVH
NAIPTLFEHVKIKNKSKLPFNRNDAEELQKEQRILMLEHSYAKTDGTSNK
EDYLDHEAQTPFSLDIFKQDAPEIEVLTYVPSSSNCINFVAANKSLSAKI
KFLASETCQEQGFNNVKLKNQ
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mRNA from alignment at LSalAtl2s211:860531..863176-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003958-699805 ID=EMLSAT00000003958-699805|Name=EMLSAT00000003958|organism=Lepeophtheirus salmonis|type=mRNA|length=2646bp|location=Sequence derived from alignment at LSalAtl2s211:860531..863176- (Lepeophtheirus salmonis)
ATGAATTGTAATTTGCATTCGGGAAGTATCAATCTTTTATTATGCACAAC
TTTAGAACAAGGTCATTAAATGTTTGAACACATGGTGAGAAATACATATT
TCCAACATGAATTGATGAGAAAACAAAATAACTTTGATTATACATAATTA
GAGTTGATCTTTACATTACCTACATATAATGTATATTCACTTAATTTTAT
GTCAATATTTTATGCACAAACAAGTATCAAAAGTAGAGTAAAAATGCTAC
ATTTTCATATTTTAAGTAAAAGCTAAGGTTAAGATATATATTCATTTTAA
ATACGGGTTATATTGATTACAACAAACACCATTTGTCTGTTTAAGTTAAA
ACTTGTACACCACATCTACATATACGAGTATGATGATGATTAGTGTTGGG
ACTCGGTCCAAGTCTATTAAGCTTAAAATATTTTTGGAAAACGATGCTTT
GTACGTGGTTCAAGCGAATTCTGGTTGAAGATTCTGAATGGAATAAAATT
CTGGTACAAACGTTCCTTGAAATAATGGACACTGTATTAGAGGGAAAAAG
AGGCAAAATACCTTACAGACTTATGCGAGTAACTAAGGATATAAGGCCAT
TCTAAAAATAAATGAAGCAGTTAATTGGGAGCTAACTGAAAAAGTTTTTA
GAAAGAATGGAATGTCAGGAAACAATTTTAGAAAATAGCAGATTGCCATA
CCTATACATATATCGGGCACGTCAATAAAAAGAAAGATATCTTTCTTGGG
AGAGGCTTTTAATAAAATAATAATTAGTTTACGGCAAATGAGATTTGCGA
AAGAGAAATAATGTTAAAGAAAGTTGCTTTTTAGAGAAGAGAAATTGCTC
CTAGTCTGAAATTGTTTTTATTTAGTACAGAGTGTTTACCAACAACCAAA
TCTTAGGTAGTTTATATCATAGAACATCGGAAGAAAAAGTTTCTTTAGTA
AACAATCAATGGAGACATCCCAACATTTTTTGTTCGATTATACTCATATA
GTTTGTATAATGGACCAAGTAATTAATATATATTTAAAAAAAGTTTAAAT
TGAGCCTTGAACTTAAAGATTTATTCTATTTTTTCACCTTCCAAAATCAA
GAGGAAATAAATTATATTTCTACAATGGTGATATTTCTTATATATAAATT
TAAAAGCACGAGAACTACTTCACTTAAGGACTTTACTGTAATATTGGAAA
ATATTGTATCAAAAATTAAAATTAACATTTTTATGAGATGATAAGTTGAA
ATATTTGTAGTTGTACCGAGGTACAAAAAAAAAAAAAATTGATTGTATTT
TTAAAAGATAAATACATATAAAAAGTTTCAAATTATTTGTTAGTTACATT
TTGAGTTCTACAATACATAATTTTCTTAAAATATTAGCTGATAATAAAAA
GACCAAAAAATCCAATTCAAATTTTTTTGAAAAACAAGTTATTTATTTTT
TAGACTTAGATAAAAGACTTAGAAGTGTGTTATTATTGTTTTTTTCGTAC
AATTTGTTTTGGTTTTTTAAATTGCTATTATAATTTTTTAATTGCTTTAT
AAAGCGGAGTCCCCATAAGAATTTTCAAGCCTTTGCTTAGCTTGAAGAGT
ATTTTTCCCCCATCAAGAAGTAGTTTAAAATCAAAACACAACATTGTTTT
TGATCCATTGGTTTGGTTTTAAAAAAAGCAGTCCCACTTAGCACAATAAC
TCATAAAATAAAGAAAAACCAGATTGTCAGGAAATTTGACTGCTGTCTTT
TGAAAGTTTGAACTAAAGGACTCAAGGGAAAGAGTGGACAATCAGTAGAA
GAAAAGTATGTTTTTTTTTCTTCTCTTTGCTGATTGGCTTAAAATTTTCA
GTTGCCATCAGGGCAATTTTAAAGGTTTTGAATTCAATTTAAGTACTACT
TTGTGAGCTTAATTTAATTATTTTTGTTTTAATTAGACAATACAGTGTAT
TGTAATAATAGATCAACTTTGACTAGAAAGCTTCTTGGCTTATCGCCCAA
GAAAATGTTTAATTTTCCAAACGACATCAATCGTAGGAAGTTGTGGATCA
ATGCTATCAAACGTACGAATTGGAATCCCACGAAAGGACTCAGGATTTTG
CCAAGTAATATTATCAACATTTTGTGAGGGATGTGAAAATTAAATTAATG
GGTTGTTTTATAATGATGTAACTGGGCTCCATATTATAATTATTCATACT
TAAATTATTTACTTTATGCTCACATTGAAGAATCAATGTTTCTGCCTAAG
TTTTTAGAAGGAAGTTGGCGTTCGGTACATAATGCAATTCCTACTTTATT
TGAACATGTTAAGATAAAAAACAAATCAAAGCTTCCGTTTAACCGAAACG
ACGCAGAAGAACTTCAAAAGGAGCAAAGAATTCTAATGTTAGAACATTCG
TATGCTAAAACAGATGGGACATCAAATAAGGAAGATTATCTTGATCACGA
AGCTCAAACCCCATTCTCATTAGACATTTTTAAACAAGACGCCCCTGAGA
TTGAAGTTTTAACATACGTACCATCATCCTCTAATTGTATCAATTTCGTA
GCGGCAAATAAATCTTTATCTGCAAAAATAAAGTTCCTGGCAAGTGAAAC
TTGCCAGGAACAAGGCTTCAATAATGTCAAACTAAAAAATCAATAA
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