EMLSAT00000003961, EMLSAT00000003961-699808 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003961
Unique NameEMLSAT00000003961-699808
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2120supercontigLSalAtl2s2120:1961..2668 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003961 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003961EMLSAG00000003961-686727Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017167EMLSAE00000017167-726095Lepeophtheirus salmonisexon
EMLSAE00000017168EMLSAE00000017168-726096Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768224auto768224Lepeophtheirus salmonispolypeptide
EMLSAP00000003961EMLSAP00000003961Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003961

>EMLSAP00000003961 ID=EMLSAP00000003961|Name=EMLSAP00000003961|organism=Lepeophtheirus salmonis|type=polypeptide|length=92bp
MKFRYTIVIPKQKSNPISELGLRRRSNKISSGGKGGKAKGKSMSCSSRTA
LQFLAVYIHRLVRKDNYIERLGSGAPVYIEALLEYIGAEILQ
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mRNA from alignment at LSalAtl2s2120:1961..2668-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003961-699808 ID=EMLSAT00000003961-699808|Name=EMLSAT00000003961|organism=Lepeophtheirus salmonis|type=mRNA|length=708bp|location=Sequence derived from alignment at LSalAtl2s2120:1961..2668- (Lepeophtheirus salmonis)
ATGAAATTTAGATACACCATTGTGATCCCGAAACAAAAAAGCAATCCAAT
CAGTGAACTGGTAAGATTTTCATCAAATGTAGAGGCAATACTTCGTGAAT
AATTATTCTGCAGAGAAAATCGCCAAGTAATATTTGGAGGGGTTACAGAG
ATGGGAGAATCTATGGGAGAAGTATACAAGTAGACTGTAATGAAAAACAA
GATAAAAATTTAGAAAAAATCTCTTGTATCTCTGTTATGTAGGAAACTTT
TCAGACCACCCTCGTATATACCATATGAGCATTAACTTTTTATCTATGTA
AATATCATTTGAGATTGAATTAAAATCTGGAATAGCATCTATCAATAAAC
TAAATATCCTTTTTTGGCCAAATTTCCTGGAGCAAATCTTCTTTTGGCGA
ATAGTTCTAGAACCAGTTATAATATCTAGGTAAATGATTTATGATAAAAA
TAACTTGTATCCTCTAAAGATAAAGATTAAAGTCTTTAGGGTTTGAGAAG
GAGGTCTAACAAAATCAGCAGCGGTGGAAAAGGTGGTAAAGCTAAGGGTA
AGTCCATGTCTTGTTCATCCAGAACGGCTCTTCAATTCCTTGCAGTATAT
ATTCATCGGTTGGTTCGTAAGGACAATTACATAGAACGATTAGGTTCAGG
AGCCCCTGTGTACATAGAGGCTTTATTAGAGTACATAGGCGCTGAGATCT
TGCAATAG
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