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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s2131 | supercontig | LSalAtl2s2131:3862..6024 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003971 >EMLSAP00000003971 ID=EMLSAP00000003971|Name=EMLSAP00000003971|organism=Lepeophtheirus salmonis|type=polypeptide|length=502bp
VTFEQIQWKESLSTKEIRELICNKIKEGGSSLYGIVDARVQGSTKSQLSF
MSAYGVPYFKLDLAKNLLLKAIESLLFYMKFTDISFVVEDEKALNETIFF
VLGQTNLRTTGTDLTNPNAALRLQKMRPSSTNYISWGKTSXXVDIYRRAS
XANILKNDVTWVFVHTDFDYDDFNQTELLNMVRFFTFDKNTCCGLADEEG
CSCKKWTKGADEYLAHTFFDIIVEAVSQTDKKIVPPSWDCSSNLPKQYSK
HFYSVITNVTEKTKYFGFKQGKSEGSRGRNFSFGESLWFAVTSLTPQGGG
ECPKALSGRILVAAYWLFIVLMLATFXSNLAAFLTVERLEKTIQSMEELI
RHPKITYTVSDSTIVHQHFINMANAERILFEKWKNLTLNSGAQTQSEFRV
WDYPIQEQYFHILQVINRVGTVTNPKEGFDRVEAATDGDFAFLHDTLEVK
FHYYENCNFILVGXPLAEQPVSIAVQQGSRLKRPLSKAILSLQKERYFEK
LT back to topmRNA from alignment at LSalAtl2s2131:3862..6024+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003971-699818 ID=EMLSAT00000003971-699818|Name=EMLSAT00000003971|organism=Lepeophtheirus salmonis|type=mRNA|length=2163bp|location=Sequence derived from alignment at LSalAtl2s2131:3862..6024+ (Lepeophtheirus salmonis)
GTCACTTTTGAACAAATACAATGGAAAGAAAGTTTGAGCACCAAAGAGAT
TCGAGAGCTCATTTGTAACAAGATCAAGGAGGGCGGAAGCTCTTTGTATG
GTATTGTAGATGCCCGAGTTCAAGGATCTACTAAGTCTCAACTCAGTTTC
ATGAGTGCATATGGTGTCCCTTACTTCAAGTTGGACCTAGCAAAAAACCT
TCTGCTTAAGGCCATTGAAAGTCTTCTTTTCTACATGAAATTTACAGATA
TCTCATTCGTTGTGGAAGATGAAAAAGCATTAAACGAAACAATTTTCTTT
GTACTAGGTCAAACGAATCTACGAACCACGGGAACGGATTTAACGAATCC
GAATGCTGCATTGAGACTTCAAAAAATGCGTCCCTCCTCCACCAATTATA
TTTCCTGGGGGAAAACATCTGAMRTTGTGGATATTTATAGACGTGCTTCA
RCAGCCAATATACTTAAAAATGACGTCACATGGGTATTTGTTCATACGGA
TTTTGATTATGATGATTTTAATCAAACAGAGCTTCTGAATATGGTAAGAT
TCTTTACTTTTGATAAAAATACTTGCTGCGGACTTGCAGATGAAGAGGGT
TGTTCCTGTAAAAAATGGACCAAAGGAGCTGATGAGTATTTGGCCCATAC
ATTTTTTGATATTATTGTCGAGGCTGTATCCCAAACTGACAAAAAAATAG
TTCCACCATCCTGGGACTGCTCCTCAAATTTACCTAAACAATATTCGAAG
CATTTTTACTCAGTAATAACCAACGTCACTGAGAAAACCAAGTATTTTGG
TTTTAAACAGGGAAAATCCGAGGGCTCAAGTATATACTTTCCCTTGAAAA
TTGATATCAATGACAAGAATCAGAGTGATACCATGAATGTTGGAGAATGG
AGAAACAAATTTAAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCTAATTTGATCATGACG
ACAGAACGGGAGGAAGTGATTGATTTTATCACACCTTATATTGATATGTC
AGGGATCTCAANCATTATTCGAAAGAAGAAAACCGCGCAATCAATTTTTW
WATTTATGACGGTTTTAAAGTTGGAGGTCTGGATTGGAACCCTCATTGCG
GTGGGGGTTGTAACAATACTCATTTGGATACTGGAGAAATTTTCACCCTA
TTACATATTCTAACGCCAAACATTTATACCCTGAAGGAGGCAGAAACTTT
TCGTTCGGAGAAAGTCTATGGTTTGCAGTTACGTCACTAACTCCTCAGGG
TGGAGGGGAATGTCCTAAGGCATTAAGTGGAAGAATACTCGTTGCTGCTT
ACTGGTTATTCATAGTACTCATGCTTGCCACATTTMCATCCAATTTGGCT
GCCTTCCTCACAGTTGAACGTCTAGAAAAAACTATCCAATCCATGGAGGA
GCTCATTCGTCAYCCCAAAATAACCTATACCGTCTCCGACTCAACAATCG
TACATCAACATTTTATCAACATGGCAAATGCTGAGCGGATTCTATTTGAG
AAATGGAAGAACTTGACTCTCAACTCCGGAGCTCAAACGCAAAGCGAATT
TCGTGTTTGGGATTATCCCATACAAGAGCAATATTTTCACATTCTACAGG
TCATTAATCGAGTTGGAACTGTGACCAATCCCAAGGAGGGATTTGATCGT
GTGGAAGCTGCAACGGATGGGGATTTTGCCTTTTTGCATGATACGCTCGA
AGTCAAGTTTCATTACTATGAAAACTGTAATTTCATCCTTGTGGGTCAMC
CTCTGGCTGAGCAGCCGGTCAGCATTGCTGTTCAACAAGGGAGTCGATTG
AAGCGCCCTCTGAGTAAGGCTATCCTCTCCTTACAGAAGGAAAGATACTT
TGAAAAATTAACA back to top
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