EMLSAT00000003986, EMLSAT00000003986-699833 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003986
Unique NameEMLSAT00000003986-699833
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s213supercontigLSalAtl2s213:344206..346473 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003986 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003986EMLSAG00000003986-686752Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017302EMLSAE00000017302-726230Lepeophtheirus salmonisexon
EMLSAE00000017303EMLSAE00000017303-726231Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776617auto776617Lepeophtheirus salmonispolypeptide
EMLSAP00000003986EMLSAP00000003986Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003986

>EMLSAP00000003986 ID=EMLSAP00000003986|Name=EMLSAP00000003986|organism=Lepeophtheirus salmonis|type=polypeptide|length=267bp
MLSDVLNQDGHETLLEFQKEFGEEKVAYNFCDVTDSTSFEELWRKTVNKF
NRPVNVLVNNAGVTHQAGWRKCLDRAVMNGNDLAIEKMSKANGGDGGHVI
NIGSTGGFITGPDQESASYFVSKSGVVTLTRSFGSKNVFNETNIRFVSLC
PAFADTKFLDSNIRSYIKNQSKLEILSIEAVVKGFIHLFKHGANGKVSIL
VKEHLPLMDWPNYEWRFLLIPLIISAKLSKKLGYNGVFDIKQQLAFFITL
FLFFYLILRFFILYLIF
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mRNA from alignment at LSalAtl2s213:344206..346473+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003986-699833 ID=EMLSAT00000003986-699833|Name=EMLSAT00000003986|organism=Lepeophtheirus salmonis|type=mRNA|length=2268bp|location=Sequence derived from alignment at LSalAtl2s213:344206..346473+ (Lepeophtheirus salmonis)
AATGGAGGCTATGTTATGCTTTCTGATGTATTGAATCAAGATGGCCATGA AACACTATTGGAATTTCAAAAGGAGTTTGGTGAAGAGAAAGTGGCCTATA ACTTTTGTGACGTAACGGATTCTACATCTTTTGAAGAACTATGGAGAAAG ACAGTAAACAAGTTTAATAGACCTGTAAATGTTTTAGTCAATAATGCTGG TGTCACTCATCAGGCTGGATGGCGTAAATGTTTAGATGTAAATATTGTGA GTTAATTTTATATTATATCCCTTAATAATATCACATGAGTGTTTCAAAAA AAAAAGACTAAAAAAAACAACAAACAAACTAGAATGGACACTCGGTAGAG CCCAAAACCTCCATCCAAAATCAAATTGAGTTTTTTTTTTCTTTTGTTTG CTAATGTTATTAAAATGCAAAGATAAGCAGGGGCTAATATTTAATTTTTT ATCCAATACGTCATCAAGCACTGGGCACATGCAGAAATAAGCATATCCCA CGGTTGTTTGCTCACTAAAAAAAATAAACAGGCTACAAATGTGCATAGTT ATTTTCTCCTAATCAGTCTACTTAACGTTGATTGGTTAAATTAGAATTAG CTATTTTTAATCTCTGAAAAATCCCCAGCAATATGGGAGCAACAATTCAA TAATTGATAAGAATTGGACAACTATCAGCTGATTTTGGTCCTCTTTTCAC TTTGCTTTTGAGAAGAGAGGCTCCACGATAAAATAAAGGGTCCAACGTGA CCATATTCCATAAATAACCTATAAAACATTGTAACTGACTTATAAACTGC ATTATAATTGAAGGCAACATCATCTTGGGGTCTCATAGTTGAAATTTTTT ATAATTAAATCAAAGTACTAGCAAGGGTGTCCTCTCATTTATAAATTTTC ATTATGGATAGCAATAAAAAATTATCACTCTATGGAAAACATTTCAATAG CATAGTGGTAAAGATAAATTTCTTCTTTTAAAAAAAGGTAACTTAATAAA ATTCAGGGACAAAATGTCAAACTCTAACATTTTTTGTCTCGTATAAATAT TTGATTTTTAATACATACTATGCTTAGATATATCATAAAACTAGGCAATC AAGGGATATAACTTTCTTGGTATCATTTTAATTTCCAATGGTTTACTAGT ATACTTAAGTTTAATGAATAAATGGGTATTTATTCTTATAAAACTTGGTT GTTTAGATACCAAAAATGGTCAAAATCAATCATGCTGACGTCATATGAAA ATGCTCTATAGAGTGAATAATTAATTGATTATTATACTAGCATGTAGTTT TAATATGTAAATATTCTGGGAAATATTTTTTCCTTATACCTTTTGACAGA GAGGTTTAGTAGTTGTGAGAGTATTTTCATTTGATATTTCTACATACATT TTGTGTTCACTAATTCATTTGTTTCTCATCCTTTAGCGAGCTGTAATGAA TGGTAATGATTTAGCAATAGAAAAAATGAGCAAGGCAAATGGAGGAGATG GTGGTCACGTCATCAACATTGGCTCAACGGGAGGTTTTATTACTGGTCCG GATCAAGAAAGTGCATCCTATTTTGTCTCTAAATCCGGTGTAGTGACTTT GACCAGAAGTTTTGGCTCAAAAAATGTCTTTAATGAAACAAATATACGAT TTGTTTCCTTATGTCCAGCTTTTGCCGATACTAAATTTTTAGATAGCAAT ATTCGAAGTTACATAAAAAATCAGAGCAAGTTAGAAATCCTCTCCATTGA AGCTGTTGTAAAGGGGTTTATTCATTTATTTAAACATGGAGCTAACGGAA AAGTATCCATTCTTGTCAAAGAGCATCTTCCCCTGATGGATTGGCCAAAT TATGAATGGAGATTTTTACTCATACCTCTGATTATTTCTGCAAAGTTATC TAAAAAACTCGGATATAACGGTGTGTTTGATATAAAACAACAATTAGCTT TCTTCATCACACTATTTCTGTTTTTTTACTTGATTTTGAGATTTTTTATA CTTTATCTAATATTTTAATATGAGTTTATTATTAAGTTCATTAAATAACA TAGGTCAACAAAAATTTCACTTCTTAAATATCTTCATATTCTATAACCAA TTCCAGTAGTATTTGATTAGCTGATCATGAAATACTGGAATTCATTTTTC ATATCAAATCTAGGATATGAGGATTTTCAATTTGAATTTTTTGAGTATTT TTACAGTTTTAAAGAGTCGTGACAACTTTTGTACATAATAAAACAAAAAA TAAAATAATAATCCGCAT
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