EMLSAT00000004002, EMLSAT00000004002-699849 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004002
Unique NameEMLSAT00000004002-699849
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2142supercontigLSalAtl2s2142:35480..36717 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004002 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004002EMLSAG00000004002-686768Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017378EMLSAE00000017378-726306Lepeophtheirus salmonisexon
EMLSAE00000017379EMLSAE00000017379-726307Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770092auto770092Lepeophtheirus salmonispolypeptide
EMLSAP00000004002EMLSAP00000004002Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004002

>EMLSAP00000004002 ID=EMLSAP00000004002|Name=EMLSAP00000004002|organism=Lepeophtheirus salmonis|type=polypeptide|length=364bp
MEFLFKSRSQGKRQIKPSQDIQYLEDTYAQESSEDSDFKIGMFIFFEPVS
SFSNTDHEDLDEERTSDSDSGDEEEDDELEEELANAKGVREMRLTTSDLL
GISKQETCFPGDEDALLFKFKVCACCLGTSSNDANEIVECDGCGISVHET
CYGITESGSVASNISEASTEPWFCDPCQAGITTSPICELCPAIGGVYKET
DVGRWVHLICALYVNGVAFGDIDKLSAITIFEINYSNWGRKACGLCEQSR
FSRTGICIQCDAGMCRSSFHASCAQXHGLLAEPVYTETDPYIAHCRLHSD
KSVIKSKKRLYAISKRQAERRKSLILESWEGQNISSTSSLALPNETPAQR
ILRKLNRRHSRFHS
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mRNA from alignment at LSalAtl2s2142:35480..36717+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004002-699849 ID=EMLSAT00000004002-699849|Name=EMLSAT00000004002|organism=Lepeophtheirus salmonis|type=mRNA|length=1238bp|location=Sequence derived from alignment at LSalAtl2s2142:35480..36717+ (Lepeophtheirus salmonis)
ATGGAGTTCTTATTCAAATCGAGGAGTCAAGGAAAAAGGCAAATCAAGCC
TTCACAGGATATCCAGTATCTAGAGGATACTTATGCTCAGGAGAGCTCCG
AGGATTCAGACTTTAAAATAGGGATGTTCATTTTTTTTGAGCCGGTTTCT
TCATTCTCGAGTTTTGAGTTTGATTTCAATTTTGATTATTTAAATGATTT
TTTTTTTGCATTGCTTTATTACGTGTTTTTGGCCTGCAATGAGTWATTAC
TAATGTCATTTACAATCTATTTGRACCTCATTAATAAATTGTCTCAACAA
CTACAGATACGGATCACGAGGACTTGGACGAAGAAAGAACTTCCGATTCC
GACTCCGGAGATGAAGAAGAGGATGATGAATTGGAAGAAGAACTCGCTAA
TGCGAAAGGAGTTCGGGAAATGCGACTCACCACATCGGATTTACTTGGCA
TCTCCAAACAGGAAACGTGTTTCCCAGGGGATGAAGACGCCCTTTTGTTC
AAATTTAAAGTCTGTGCCTGTTGCCTCGGAACATCCTCCAATGATGCTAA
TGAAATCGTGGAGTGCGATGGATGTGGCATATCCGTACATGAAACTTGCT
ATGGCATCACTGAATCCGGCTCAGTAGCTTCAAATATATCTGAAGCATCC
ACAGAGCCTTGGTTTTGTGATCCTTGCCAAGCAGGAATAACGACAAGTCC
GATTTGTGAACTGTGTCCCGCTATTGGGGGTGTGTATAAAGAAACGGATG
TGGGTAGATGGGTTCATTTGATCTGCGCTCTTTACGTTAATGGAGTTGCT
TTCGGGGATATTGATAAACTTAGTGCTATCACAATATTTGAGATAAACTA
CTCCAATTGGGGGAGGAAAGCATGTGGATTGTGTGAACAAAGTCGCTTCT
CAAGGACAGGGATTTGTATTCAGTGTGATGCAGGGATGTGTAGATCTTCT
TTTCATGCTTCTTGTGCTCAAMCACATGGCCTTTTAGCCGAACCCGTATA
TACGGAAACAGATCCTTATATAGCACATTGTCGTCTTCATTCTGATAAGT
CCGTGATTAAGTCCAAAAAGCGCCTTTATGCTATTTCTAAAAGACAGGCG
GAACGAAGGAAAAGTTTAATTTTAGAATCTTGGGAAGGACAGAATATCAG
TTCAACTTCTTCCCTGGCTCTTCCTAACGAAACTCCAGCTCAAAGAATCT
TAAGGAAGCTGAATAGAAGACAYTCTCGATTCCACTCT
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