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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s215 | supercontig | LSalAtl2s215:1121780..1126611 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004018 >EMLSAP00000004018 ID=EMLSAP00000004018|Name=EMLSAP00000004018|organism=Lepeophtheirus salmonis|type=polypeptide|length=905bp
MMELKEDMDWLLAKPDSPVLIMPSESDTDEDEEKEEEEEDEDYNPPSMET
NVADLEEGKEATQLLEVGEEEEEDYTLLGPQVEEEEEEEEDKGGVWSSPG
XCGLRNVGNTCYLNAGLQCLLATQPLVQYFSAWKEGNERIGEEKEENNGG
GGSDLDGVLSSSFSSLLTQVWKGESRVLKPLKFKEKLSNNHPQFKGSHQH
DCQEFLALLLDSLHEELKRXPIKTPASSPDSQSSAENPEQKSHLSSIRQR
PLPLHFQLPHSLNIEDYLKENKTSNARPDATINNLSTSKVINNCGGKEDE
VRSTTSSVGKRFKETNLLKISEVVEEESSGMKRMRLDSSEKNVQLEWERN
AMDELANENKSSGNLNRDASLYQESLDSSKLNETIEADRVWDKYLSDNDT
VIARNFHGQFKNKVVCSVCDHVSVTFEPFMYLPVPLPGALTRQVDLVFLG
RASVPIRVRLNMTRVDNVGNLKTRLKEVLMLEESSKLQIVEVFDHHISRN
VDDWTALKFLKEDRQIYVLELIEAEDYFDGXXAVEDXPTTELDDGGGEDS
LASQDYQTCIICMEDLPPGFLRQHNSCDCVICNTCMDPDPETEFVTLDKI
GRSVPKKRILNVPVIYRLDNSEENDNNKKTVDTXGHPFVLIVPNIVSGKK
XYELIDPLVKPIASEDYTLVLVNATGKKCARCIYQAHCYGCIRLERNSSS
RIYLQPNDTIAISFTNESVVQKVNTLREHESISENPKIRDKLCLTDCLQA
FSEKEVLDENNPWFCPQCQKNQCATKTLTIWRFPNYLIIYLKRFVYLPGT
AGAVKLETPVEFNLSNFDLTQFLSGPMPDSRPRFDLYGVVNHFGSVCGGH
YTSFTKNDQQWNYFDDCSVTEKKVPGSCSGIPNKTSRQDLSSRILTSKFN
IESLN back to topmRNA from alignment at LSalAtl2s215:1121780..1126611- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004018-699865 ID=EMLSAT00000004018-699865|Name=EMLSAT00000004018|organism=Lepeophtheirus salmonis|type=mRNA|length=4832bp|location=Sequence derived from alignment at LSalAtl2s215:1121780..1126611- (Lepeophtheirus salmonis)
ATGATGGAATTAAAAGAAGACATGGATTGGCTTCTCGCAAAGCCGGATTC
GCCGGTATTGATCATGCCGAGTGAGAGTGATACGGACGAGGATGAAGAGA
AGGAGGAGGAAGAAGAGGACGAGGACTACAACCCGCCCTCGATGGAAACG
AATGTGGCGGATCTGGAGGAAGGGAAGGAAGCGACWCAGTTGCTAGAAGT
GGGGGAAGAAGAAGAAGAGGACTACACACTCCTGGGCCCCCAAGTTGAAG
AAGAAGAAGAAGAAGAAGAGGACAAAGGCGGCGTTTGGAGTAGCCCGGGA
GNGTGCGGCCTCCGGAATGTGGGGAATACTTGCTATTTAAACGCGGGGCT
TCAATGCCTCTTAGCCACGCAGCCCTTGGTGCAATACTTTTCCGCTTGGA
AGGAAGGGAATGAGAGGATTGGGGAAGAGAAGGAAGAGAATAACGGAGGA
GGAGGAAGTGATCTGGATGGAGTCCTCTCCTCCTCGTTTTCCTCCCTTCT
AACCCAAGTATGGAAAGGAGAAAGTCGTGTTTTAAAACCCCTTAAATTCA
AAGAGAAACTCTCGAATAACCATCCTCAATTTAAAGGCTCTCATCAACAC
GATTGCCAGGAATTCCTGGCACTCCTACTTGATTCCCTCCATGAAGAGCT
AAAACGTANCCCTATCAAAACCCCGGCCTCCTCTCCAGACTCTCAATCCT
CCGCTGAAAATCCAGAACAAAAATCTCATTTGTCCTCCATTCGACAAAGA
CCCCTTCCTCTTCATTTTCAATTACCTCATTCTTTAAACATTGAAGACTA
TTTAAAGGAAAATAAAACCTCCAATGTAAATGTGAATACATTGCAAACAG
ACTCGGGCATGAATAATGTTATCAATTTTGATTCAGATAAATATGCCTCC
AAAGAAAAGGCTCGCCCTGATGCGACGATCAATAATCTCTCCACGTCTAA
AGTTATTAATAATTGTGGGGGTAAAGAGGATGAAGTAAGGTCAACAACAT
CCTCTGTTGGAAAGCGGTTTAAAGAGACGAATTTATTAAAAATATCCGAA
GTCGTAGAAGAAGAATCTTCAGGGATGAAACGTATGAGGTTAGACTCATC
TGAGAAAAACGTACAATTGGAATGGGAAAGAAATGCGATGGATGAGTTAG
CTAATGAAAATAAATCAAGTGGAAATCTCAACCGAGACGCGTCTCTATAT
CAAGAGTCCCTCGACTCTTCAAAGCTGAATGAGACCATCGAGGCAGATAG
AGTTTGGGACAAATACTTGTCCGACAATGACACAGTCATTGCACGTAATT
TTCATGGTCAATTCAAAAACAAAGTTGTTTGCTCTGTGTGTGATCACGTT
TCCGTAACTTTTGAACCTTTCATGTACTTACCTGTACCTTTGCCGGGTGC
ATTGACGCGTCAAGTAGACTTGGTGTTTCTTGGTCGTGCATCAGTACCCA
TCCGTGTCAGACTCAACATGACACGCGTGGATAACGTTGGAAATTTAAAA
ACGCGATTAAAAGAAGTTCTCATGTTAGAGGAATCTTCCAAGCTACAGAT
TGTTGAGGTGTTTGATCATCATATTTCCAGGAATGTGGATGACTGGACTG
CTCTTAAATTTCTCAAGGAGGATCGTCAAATCTATGTGTTAGAACTTATT
GAAGCAGAGGATTATTTTGATGGTKAAYAAGCCGTTGAAGACKCRCCCAC
CACAGAACTGGATGACGGTGGTGGTGAAGACTCTCTTGCTTCTCAAGACT
ATCAAACTTGTATTATTTGCATGGAAGATCTACCTCCGGGTTTTTTGAGA
CAGCATAATAGCTGCGATTGTGTTATATGCAATACCTGTATGGACCGTAC
CATTGAACACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCATAAGGAATGTACCACCTTATTCGGACAAATCAAATGTCC
CGGATGTCGTATTGAAGCAGATCCTGAAACGGAGTTTGTTACCCTTGATA
AGATAGGTAGATCTGTACCCAAGAAACGGATCCTTAATGTGCCTGTTATT
TACAGATTAGACAACTCGGAGGAAAACGATAATAATAAAAAGACAGTGGA
TACCAWTGGGCATCCCTTTGTGCTCATTGTACCAAACATAGTGTCTGGKA
AGAAAAWGTACGAACTAATTGACCCCTTAGTCAAACCTATCGCATCAGAA
GACTACACACTTGTTTTAGTAAATGCCACAGGTAGGCCAGTGAGTTGATC
GAAGGACAACATTACATGCAGTATCGTGAAATCTATAACTAAGAATGTAT
ATTTTTTATAGGGAAGAAGTGTGCTCGCTGTATATACCAGGCCCATTGCT
ACGGATGTATTCGTTTAGAAAGAAATTCAAGCTCTCGTATATATTTACAG
CCTAATGACACAATTGCTATATCCTTTACGAACGAGTCAGTTGTTCAGAA
AGTGAATACTCTTCGAGAACATGAATCAATATCTGAAAACCCAAAGATAA
GAGACAAGTTATGTCTGACTGATTGTCTCCAAGCCTTTTCTGAAAAGGAG
GTTCTTGATGAAAATAATCCTTGGTTCTGTCCACAGTGCCAAAAAAATCA
ATGTGCGACCAAAACCCTTACTATTTGGCGATTCCCCAATTATCTCATTA
TCTACCTTAAGCGGTTAGTGTCTTTTTGAAAAATACGAAGGCACAACTAC
GAAGTTACTTATTTGTTTTCTCTTTATAGGTTTGTGTATTTACCGGGTAC
GGCTGGGGCCGTCAAACTTGAAACTCCCGTAGAGTTTAATTTGTCTAACT
TTGATCTAACACAGTTTTTATCGGGTCCCATGCCAGATAGCCGTCCTCGG
TTTGATCTATACGGCGTAGTCAATCATTTTGGTTCCGTTTGTGGCGGSCA
TTATACCTCCTTCACGAAAAATGATCAACAATGGAATTATTTTGATGACT
GCTCTGTAACAGAGAAAAAAGTTCCGGGATCATGCTCTGGTGACTGTTCA
TCAGCCTATGTTTTATTTTTCAAACGTTCAGGTATGTAAGGTTGATCTTT
TACTTCTATTATGGGTTTCCACATCTATTATGTGTGTTTACACGTAAATA
CGTCTTTAAGAATGGAAAATTTATTTCTAAGGACTTTGTATATAAGTTTA
TAAGCACCTTAGATATTTTGTGCTTTCAAAATTATATTTATCATGGTATT
TTGACTCCTACAAACAATAACCATTTTTAAAAGGAGGTTTGAAGATTATA
ACAAGCAAAGTTTACATAAATAAATTGTACATTGGCTCATTCAAGAATTA
CAATGTATGTATTTTATACTATACCCATTATCGGGTTAACATCCACCTGT
CCTTACACAAAGACCTTTCATTCTGGCGGAAAATAAAATAAAACTTACCT
GATCAAAGATTGAGGATACTCCGGCCATTTCAATTTTAAATCGGAATGGG
CACTCTGTTCATTTTTCCTAATTTGGATTTTTTCCTATATGAAGCATCTT
CATTAAGCCTACATAAGGACACCAATTTGAGCTCTGTACCTCAACATGTT
CCAAAGTTATGGTCAATGATGTATTTTTAACTTTTTGTGCTACTTTGACT
TCTAAAATTTTAATGGTTTCTTACTGTTACCATATATAATCTTCGTAGCA
AGTTATAAATATCAAAATCGGTCTCTAACTTTTGGTGTAATCCTGGTGAC
ACACAGACAGACAAATTAACAAGCAGAGGCTTTCATAGATTACGTCATCG
ACAAAGAATAATTGATTTATTCTACGCATCTTTGCCGATTTTTTTGTGGA
AACAGAGGGTAAATGGTTATCCCAGAATAGGTCAAAAACACCCGGGATCA
ATTCATTGAGGAAGGTGAGAATCATATAACGAAGGTTGCGGGGGTGAAGA
AGAAGTTCGGGATCTTTGGTTGAAAAAATTGATGTTGTCTAATTTCCCCT
GTCAATGGATTCAAGTGAACTGTACTTAACAATCATCCGGTAGGATGTCA
CCTTACTCTAGATCAAACAAAAATTATCAAGAGTATGTTTGGTATCAAGA
TGGCGCCCTATTCCAAACTTCCAAGAAAAATAAAAATAAATATTTTCTAA
CAACTTTTTTGAAAAGGGCCCAAAGAGTTTGATCCATCTTGATTACAATT
TTGACTCTTGATTGGATTTTTCAGAAACATAAACATAATCACCGTTCAAC
TTCACTGGCGGATGTAAAAAATAGGATTTTCGGTTCGAAATTGGCCATTT
TTAGACCATTTGTAAGGTTCCAAATATGATGATGCTATGAGTCAAAATTG
TACTTTCATATATTTTTAGCGATTTGGTTTTTTATCAGTAAAAAATATTG
TGAATCCAGTTTTTAATAATTTATGGAGCCTAAGATGTGCTCAATGATAT
GCGTTTTCCCTGTTTTAGAAAGATAATTAATTTTCCTCTTCTTTTTTTTT
TTTGTAAAAAACTATCACTTCAACTAGAGTTAAATTTTGCTATGTTAAGT
TTGTTGAAGCAAAAAAAAAAAAAATGGCCTGACCATGTTTGATAACCGAG
AAAGTCGGTGGTGTTTCTTATTGTCCTCAACAAAAAAAAGTCTTAAAGGA
TGGGGGAAATATTAATCCGAAGAGTAGAATCATGATAGCTGTGGGAACTC
AGCTTTGCAAATAATTAATTAACTATCTATTTATAAATATGAATTATTTC
AGGAATTCCCAACAAGACATCGCGTCAAGACTTATCCTCCCGGATTTTGA
CCAGTAAATTCAACATTGAATCACTCAACTAA back to top
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