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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s215 | supercontig | LSalAtl2s215:459755..464780 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004032 >EMLSAP00000004032 ID=EMLSAP00000004032|Name=EMLSAP00000004032|organism=Lepeophtheirus salmonis|type=polypeptide|length=639bp
MTEDTQCETMGLXATMLTNPLERYIPPSPSLKRKTTEEILPTGGVGLVVD
PPKKLCLEVLKDASSRVVEEALQTILDEDNKENQSRTKVHLSPMMASNGG
SAASDVPKVIVQHSPLPSIYELEQMAALPATAXXHPNPLGPTLLHNSTXS
SSCSSSSSSSSNSEEEEEETIPTPPLSDDSGSDESEEDDFXXATAAXPXA
TRTYPQTLEQRYWGAGGGSALKRSPPASVPLQSHPSPPPSPFGFLEQNDQ
RIECAENGKSYLQLGTVNHHHHHHHHHHGSSSPXHNHIPVTPVIQPKSPY
YHQHHHHQNQNNHHSSPARRAQLRHHHHHMLPRPLCDHSNCLQRRSSLCY
RNHRNRMLNVSLHKLHLARQNHEGSLRRSVLICNMLRHIEEEAEKEQIEQ
AHFNNNXLPPSSSGISNGSEELYSWSTSGSNDAPSYNGNGVGVPPSPLPP
QATQLQVLQPQPQQPQQQTPFPGQTSPPYDTYEMTLKDFNSAFRSTPYGS
PAHHLGSIDGDSMLEESGVGETAAINWSSVLNLSSGSALDPLNNNSSFGA
TQGSMDGSSNNGNGGHSWGTTNGNPNSNPTSPIPTNNSTQPNHNNNNIVI
SNSKCNITADEGFEELGWKLSAEDVLKAFPNDEHIFVGP back to topmRNA from alignment at LSalAtl2s215:459755..464780+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004032-699879 ID=EMLSAT00000004032-699879|Name=EMLSAT00000004032|organism=Lepeophtheirus salmonis|type=mRNA|length=5026bp|location=Sequence derived from alignment at LSalAtl2s215:459755..464780+ (Lepeophtheirus salmonis)
TGGAATTTTCCCCGGCAAGCCCCCGCTCCCGCGGAATAAAGAAAGAAAGA
AAGACAGTAATAGAATAAAAATTTTTTGACAAGGTATTGCCAACTCTGCG
CTCGAGAAGGGAACGTCACGTTTATTTTTCCTTAGCTTTTTTAACGAGTT
TTTATAACATTTAATAATAATACAATATAATATAAAACGAATTCGAATCT
ATTCGACTATATATAAGAACGCCGAGGGCTTTTAATATCTATAGAAGAAG
TCTTTAAAGTGACAACAACATACACGAACAAACACTCAACTTTCCACCGG
AACAACGAAAACAATTAACTCATCCCAGATTCAACTTTACTCCTCGTCGA
CCTGTGAAGGAAACTTATTGAACTATTAATTCAAGGCCGAGGATATACGA
TTCCGATCCTTTTGGAATGTTGAGAGAAGCATGACTGAAGATACACAGGT
GAGAAGTGCTTGATAGTTGATTCAATACTCAATACTCTTATAAATCTCCA
ATCCCCGACTCCCGAGTTTGTGGTTCTATGTTTATTTGTAATTAGACTTA
GTTTATATACATTTAATTCACAAGTTCATTTGTCAAAACAAAAAAAATAT
ATGTACATAATTAATTCATCAACTCAACTCTTTTAAGATGGAGATGTCAT
TGCAATTGTGACGCAATGTCTGCTGATGCACTCCCCCTTTTTGCACCCCC
TCTTTTTTCTTCGATTGCATCACTTTCTTTCCCATTATTTTTTGCGTATT
CCTCCCCCTCCTTTTTCCCGTATTAATATTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAA
TAGACACGACATTTAAAAAATATTCCTCTGTMTTTTCSCRAATTWAYTTA
CAMAATAATATAATACTATATATAAATCCCCATCATCATCTAAAGGGGTA
GCAATGACGTCAATGAACGTTCACTATTATCTTGTATGTTCAAATACGTT
ACAAAACATGTTGCTAATATACATACATTCATTTATGTAGGCAATAATGT
ATGCGAGTCCAAATATCATCCCTTTACATAATTTCCCGCGAATTTTTTGA
ATGATTATTATTACAATCATTTTCTTCTTCTTTCTTCCTTTTTTTTACAA
TTAATAATAAAAATGATAGGCGAATATTTATTATTTTATAAGAAGAATTG
TCTTCAATGTTGTGAGCTCAATGGAAGGGAAGGCCGGCCTGCGCCTCGCA
CGCTCCCTTCATTTTTTTCCCCCTCCCTCCTTCCTAAGTTATACAAAGTA
CTAATATTTTACATGGATAATAACAACTAAATACGCGCGCGCGATCTTTC
CCTAAGGTCGAAAAAGAAGAAGGGAATAATAAGGTAGCAGGAGTACTACA
ATAACAACTACTAATAGTACAGTGTTGGTGGTGTAGACCTTCTTCTTTAT
GTCAGGRAGGKTGAAATYCCCTGCCGCTCTTGGTGCATCGTCACTACTAA
TACTCCCTTCTATGGAAGAGAAAAATATAGGAGCAGGGATTTTCAACCTT
CTCGACACTTTCCTCCTTCTTTGATAGACATACAAACATGCTCTATACAC
ACACACACATTGTGTATGTATTTTTTATCAAGCTTTAAAATATATTATAT
GTATTTGTAGAAGAAGAAGAAGAAGAGATGATGTCGGCTCAATGCACACA
CACATTGAAATATTTCTTTTTTTCTTCTTATTTATTTTCATAATGAAGTT
TGTTTGCCGGATTCTTTTTTCTAATTTTTTATTTGGGCATGTTTTAACAT
AATTTCTTGTTAGTCATCATAACTTTAGAGACAACAACAACTACTGCTCT
AGTAGGAGCAGGCAATTGCGCTCGAATTATGACCCAATCAAATATTTTTC
CGTCAATCACGTGGTAATTTATGCATAGACGTAGTAACTTACTTACTAAT
AGTAAGAGGGAGGGAAAATTCAAAATAGAAAAAAAGGGATGATGGAATCA
AAATCCCCCTCTCTGTTGCAATCTTCTATGAAATCAAACTATGAATGAAA
CTATTTTACCATCGGTAAAAGGAGGTTTTGAAATACATGTATGTATATAT
ATTGAAATATTCTCTATCCTCTTTTATATATATATATATATATATTTTGA
AGACCTTGTACAAAGTGTTGTAGATATTTTTGTGAGGCATCTGGCGAGCG
CGCCCGGCCCTTGATGAAAAATAGAAATAGGTTTTTTTATCTTCTTTCTT
TTCACAGTTGAATAGAACTCTTGGTTAGAACTCCTAGAACGTACTTTTGT
AGTAGGTTAAAGAGGGGAAAGAGGACTAAGGTGCGTTCGTTGAATTTAGA
GCAAGAACATACTACAAATTAGAGTCCATCCCATGAAATAGATTTTGTTC
GTTATGTATAGAAGTAAAAATGTATGTTTGGAGATAATATTTATATTTAA
TTATGCAATGATTACTAATTAATCTTGTTTTTTTTTCTCTTACCTATAGT
GCGAAACCATGGGTCTTMAAGCCACAATGTTAACTAATCCGCTGGAGCGA
TACATTCCTCCTAGCCCAAGCCTCAAACGAAAAACAACCGAAGAGATTCT
TCCTACTGGAGGAGTGGGCCTAGTAGTAGACCCTCCTAAGAAATTATGCC
TCGAAGTCCTCAAAGATGCCTCCTCCCGTGTGGTGGAAGAAGCCCTTCAA
ACCATCCTTGATGAAGACAACAAAGAAAACCAAAGTCGGACAAAAGTCCA
TCTTTCCCCAATGATGGCGAGTAATGGGGGATCAGCCGCTTCAGATGTGC
CCAAAGTCATTGTACAACACTCGCCTCTTCCCTCTATTTATGAACTGGAA
CAAATGGCAGCTCTCCCGGCAACGGCGGSGCMTCATCCTAATCCCCTCGG
CCCAACTCTCCTTCATAATTCCACGMCCTCTTCATCTTGTTCTTCATCCT
CCTCGTCTTCGTCTAATTCCGAAGAGGAAGAAGAAGAAACTATTCCTACT
CCACCTCTATCGGATGACTCTGGAAGTGATGAATCCGAAGAAGACGACTT
TMCGNCCGCCACGGCTGCAYCCCCASCAGCCACACGGACTTATCCCCAAA
CATTAGAGCAGCGATACTGGGGAGCTGGAGGAGGCTCCGCGCTTAAAAGA
TCTCCTCCTGCCTCAGTCCCACTTCAAAGCCACCCCTCTCCACCCCCATC
CCCCTTTGGMTTCTTGGAACAAAATGATCAAAGGATAGAGTGCGCAGAAA
ACGGAAAGTCATACCTACAGCTCGGCACCGTGAATCACCATCATCATCAT
CACCACCACCATCACGGATCCTCCTCTCCGCMCCATAACCACATCCCGGT
CACACCTGTGATACAGCCCAAGTCACCCTACTATCATCAACATCACCATC
ACCAAAACCAAAACAACCATCACTCAAGTCCTGCACGCCGAGCCCAATTG
AGACATCATCATCACCACATGCTCCCTCGCCCACTCTGCGATCATTCCAA
CTGTCTACAACGGAGATCCTCTCTCTGCTACAGAAATCATCGCAACAGGA
TGCTCAATGTCTCTCTTCACAAACTTCATCTCGCTCGACAAAACCATGAG
GGCTCTCTACGAAGATCTGTCCTTATATGCAATATGCTCAGACACATAGA
AGAAGAAGCAGAGAAGGAACAGATCGAGCAGGCTCATTTCAATAACAAYC
MCCTGCCTCCAAGCAGTAGTGGGATCAGCAATGGTAGTGAAGAACTCTAC
TCTTGGAGTACTAGCGGTAGCAATGATGCCCCTTCATACAATGGTAACGG
AGTTGGAGTTCCACCATCACCTTTACCACCTCAGGCAACTCAATTGCAAG
TCCTTCAGCCCCAACCACAGCAGCCACAACAACAAACCCCCTTCCCTGGT
CAGACCTCTCCACCCTACGACACCTACGAAATGACACTTAAAGACTTTAA
TTCCGCGTTCCGTTCCACACCCTACGGAAGCCCGGCTCATCATCTTGGTA
GTATCGATGGAGATTCCATGTTGGAGGAAAGTGGTGTTGGAGAAACTGCT
GCTATCAATTGGAGCTCAGTCCTTAATCTATCCAGTGGCTCAGCCCTGGA
TCCCCTGAACAATAACTCTTCCTTTGGAGCAACACAAGGCTCCATGGATG
GAAGTAGTAATAATGGGAATGGGGGTCATTCGTGGGGCACAACTAATGGT
AATCCAAACTCCAACCCCACGTCCCCTATCCCCACCAATAATAGCACACA
GCCCAACCACAATAATAATAACATTGTCATTAGTAATAGTAAATGTAACA
TCACAGCAGATGAGGGATTCGAGGAACTTGGATGGAAACTCAGTGCGGAA
GATGTACTCAAGGCATTTCCCAATGATGAACATATATTTGTGGGCCCTTG
ATGAGTCTTCTTTCATCCTCCTTCCTTCCTAAGCCCTTGTTGTTTTGTGT
CATTATGTATACAAAACAATAATATGAAAAGACAAGGAACGAGAAGAACT
ACAAAGCGTTAAATCATCGTGCAATTTTTTTGAATTTGTCAGACTCAAGC
AAATATTATTTGTACCAAACTCTTACTCTGTTACTCTCTGCAGTTTTTAT
TTCGTTTTTTTTTCATCATCATCAGAAGTTGTCAGTCTCCATAATTTAAT
ATGATTACGCTACACTTCTATATATACTATTTTTTTTTCTTCATTTTTGA
AAGAAAACTAAATTATTCAGCTGTGA back to top
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