EMLSAT00000004106, EMLSAT00000004106-699953 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004106
Unique NameEMLSAT00000004106-699953
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s217supercontigLSalAtl2s217:520810..522316 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004106 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004106EMLSAG00000004106-686872Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017810EMLSAE00000017810-726738Lepeophtheirus salmonisexon
EMLSAE00000017811EMLSAE00000017811-726739Lepeophtheirus salmonisexon
EMLSAE00000017812EMLSAE00000017812-726740Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778350auto778350Lepeophtheirus salmonispolypeptide
EMLSAP00000004106EMLSAP00000004106Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004106

>EMLSAP00000004106 ID=EMLSAP00000004106|Name=EMLSAP00000004106|organism=Lepeophtheirus salmonis|type=polypeptide|length=461bp
MGKEKVHINIVVXGHVDSGKSTTTGHLIYQCGGIDKRTIEKFEKEAQEMG
KGSFKYAWVLDKLKAERERGITIDIALWKFETPKFYVTIXDAPGHRDFIK
NMITGTSXADCGVLIIASGTGEFEAGISKNGQTREHALLAYTLGVKQLIV
GVNKMDSTEPPYSQARFEEIKKEVSGYIKKVGYNPATVPFVPISGWHGDN
MLQTSPNMSWYKGWEITRKEGKASGTTLLDALXSIVPPARPTDKPLRLPL
QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPNNLTTEVKSVEMHHESLP
EATPGDNVGFNIKNVSVKDIKRGYVASDSKNKPAVGCKDFTAQVIVLNXP
GEICNGYTPVLDCHTAHIACKFNQIKEKVDRRTGKSTESNPKSIKSGDAG
IVELVPSKPMCVEAFSDFPPLGRFAVRDMRQTVAVGVIKAMCPKEVSGTT
TKAAQKAQKKK
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mRNA from alignment at LSalAtl2s217:520810..522316-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004106-699953 ID=EMLSAT00000004106-699953|Name=EMLSAT00000004106|organism=Lepeophtheirus salmonis|type=mRNA|length=1507bp|location=Sequence derived from alignment at LSalAtl2s217:520810..522316- (Lepeophtheirus salmonis)
ATGGGAAAGGAAAAGGTCCATATCAACATTGTCGTCARCGGCCACGTCGA CTCTGGTAAGTCAACCACCACCGGTCATTTGATCTACCAATGTGGAGGTA TCGACAAGAGAACGATCGAGAAGTTCGAGAAGGAAGCCCAGGAAGTAAGT ATATAAAGTGATGAAGGGTTACGGCAGMTGTGYCATGTGTTGYTTTTGCT TGCTCGTAGATGGGAAAGGGATCTTTCAAGTACGCCTGGGTTTTGGACAA ACTGAAGGCCGAGCGTGAGCGTGGTATCACCATCGATATTGCCTTGTGGA AGTTCGAGACCCCCAAATTCTATGTGACCATCARCGACGCTCCCGGACAC AGAGATTTCATCAAGAACATGATCACTGGCACTTCYKAAGCTGATTGTGG TGTTTTGATCATCGCCTCCGGTACCGGAGAGTTCGAGGCTGGTATTTCCA AGAACGGACAAACTCGTGAACACGCCTTGTTGGCCTACACTTTGGGTGTG AAGCAATTGATTGTTGGCGTGAACAAGATGGACTCAACGGAGCCTCCCTA TTCACAAGCTCGCTTCGAAGAAATCAAGAAGGAAGTCTCTGGATACATCA AGAAGGTTGGCTACAACCCCGCCACTGTTCCCTTCGTCCCCATCTCCGGA TGGCACGGAGACAACATGTTGCAAACTTCTCCCAACATGTCCTGGTACAA GGGATGGGAAATCACCCGTAAGGAAGGAAAAGCATCTGGAACCACCCTTT TGGACGCCCTCGKCTCCATCGTRCCCCCAGCTCGRCCCACAGACAAGCCT CTTCGTCTCCCCCTTCAAGATGTCTACAAAATTGGAGGTATTGGAACAGT GCCCGTCGGTCGTGTTGAGACCGGTATCTTGAAACCTGGAATGGTCGTGA CCTTTGCCCCCAACAACTTGACTACTGAGGTCAAGTCCGTTGAGATGCAT CACGAGTCTCTCCCAGAAGCTACCCCTGGAGACAACGTTGGATTCAACAT CAAGAACGTGTCTGTCAAGGACATCAAGAGAGGATATGTTGCCTCAGACT CTAAGAACAAGCCCGCTGTTGGCTGCAAGGACTTCACCGCTCAAGTTATT GTCTTGAACCKCCCTGGTGAGATCTGCAACGGATACACTCCAGTATTGGA TTGCCACACCGCTCACATCGCCTGCAAGTTTAACCAAATCAAGGAAAAGG TCGACAGACGTACTGGTAAGCATTCAGGCTGTAACACTAAATGAGTCATG TAATGCATTATCTTTTTTTAGGTAAATCCACTGAAAGTAACCCCAAGTCC ATCAAGTCTGGTGATGCCGGCATTGTGGAGTTGGTACCTAGCAAACCCAT GTGCGTTGAAGCTTTCTCAGACTTCCCTCCCCTCGGACGTTTCGCTGTTC GTGATATGAGACAAACTGTTGCCGTTGGTGTCATCAAAGCTATGTGCCCC AAGGAAGTCAGTGGAACCACCACCAAGGCCGCACAAAAGGCCCAAAAGAA GAAATAA
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