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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s221 | supercontig | LSalAtl2s221:105327..111902 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004187 >EMLSAP00000004187 ID=EMLSAP00000004187|Name=EMLSAP00000004187|organism=Lepeophtheirus salmonis|type=polypeptide|length=505bp
SLPNPIPRIFIGACNIRVTEIIAAIAVSFGPFAVGMGKGYTSPALASLQV
RLGADGRRIPSTNSASDLTITDQEGSWVASLSLLGALLGGIFSSLILKHG
RRRILLFVSLPFSLSWLLTTIASNVEMIYVTAFAVGFCSSIVQLATQVYI
SEIAHPSIRASLCSSSKVFSQVGLLTSFALGAWLNWRQLAIVCAIGPIMT
FIAALNVPETPSFLVFTNQDKRAERSLRWLRGASYYTHDAFDDDNMGVSE
ELATLHANIRMKREQRSCCSKKVVMSQLFRPLSITCGVMFFTRFSGVTAF
NFYAVPIFRESFESFNPHLAAVLTGSVQLISSAMSGILCDLVGRLPLLVI
SSVLMSGALAGFGVFSYFQRSDFIEATEGGAILSYAQHDWIPLACVVTFV
AAFSLGLNPISWLLIGEVFPIEYRSLGPALTTSFGYVCAFIGVKTFVDLR
LWLGLFGTFWTYAVIAAIGLLFTLLYVPETKGMSLDEMEPKTCSILKSSD
DPSKV back to topmRNA from alignment at LSalAtl2s221:105327..111902- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004187-700034 ID=EMLSAT00000004187-700034|Name=EMLSAT00000004187|organism=Lepeophtheirus salmonis|type=mRNA|length=6576bp|location=Sequence derived from alignment at LSalAtl2s221:105327..111902- (Lepeophtheirus salmonis)
TCACTTCCAAATCCTATTCCACGAATTTTCATTGGAGCTTGTAACATCAG
AGTAACGGAGGTATGTACCTACAGTTTATGAATGAATGAACGTAATATTA
TTAGGTGCTGGAAGTTGTGTTATTTGTATATATAAAGGGGGAGAATATGT
CATTTAGAATGAACGTGTCGCAAAATATGTGACTCGTATCTTGGAGAAAG
ACTTTCATATTTAATTTTCCTTTTCCACGTTTTTTGAGGTGTAGCCAAGA
AATAAATGGAGTGAAATAGGGGGGGGGGGGGGCTGATTTTCATTTTCTCA
AATAAAAATTATAATGCAAATCGGCTATTTATTTCTATTGAATCTGCCTC
TTACATGCTCTAGTAATGTGTTGTACAAGTTGCAACTTGTACAAGTAAAT
TGTACAAAACGCAGGTCCTAAAAATGAGTAGGGATATGTATGCAATGATT
GAATATTCTTTAGATGAGTAGCTCTTTTATCTGAACATTTCTAAAAAAAA
ACTTTTTTTTTTTTTTTTTGCATAATACTCGTGTTATTTTTTGAAAAGGA
ATTGTAATGACCTTTTCAAGAAATGTTATTACTTTCTTTTTTAGTACATG
GGATTTTTGTAAGACTGAACTAATTCCGTCCGTCCTATTTTCGTCACGAC
CGGTCTCTTGTTCTAGTGCTTCAGCCTTAGTCACTTAAGAACGAATTGGC
TAATATAATCCATCTCAGATCGAGTTTCACAGTGGCATTACAGGATTTTT
TTATTTTTTTGAAAAAAAAAAAATTGAAAAATTAAATTTAGATTTCATGA
AAAAATAATTTGATAAGTCCACAGCTATTCCCAAAAAATAAAAATAATTA
ATTAAAAAATTTCTAATATTAAATTTTTTGGGAAAATTTTTTGAAAATTA
AATTTTAATTTGCTGGAAAAAAATTTCAATAATCCACAGCTTTTCACGAA
AAAATTCAAAGATCAACAGCTATTCACAAAAAAGTAAAAATTTTGAAAAA
TTAAATTTTCTAGTATAAAACAAAATTAATTTAATTTATCTTTAATTTAG
GGAGGGCTACAACCCCTCCTGCGCATCCCCTGCGGACGCCCCTGTTTGAA
CAAGAAATGATATGTTAGAGTTATAACTTTTGACTTTTTTAATGAATAAA
AATAACTCAATTGATATAACGCATTCCTTGGGACAATATATGGCTCAAAT
GTCCACAGTTATATACATAATGAATATGTAATGTAAATAGATTAAAATGA
ATTGATAGCATCCATATATGTATAATTAGTAATTATAATTAGTAGTTTTA
CTATCATTACATCACTACGAAACTTGTACACGGCATAATACATGTTGTAC
ATCAACTTAAAAACATTTGTGAAAAAAATCAAGAAAAGGACAAAATCCTA
ACTTATTTTTTTAGTTTGTAAATATGTACACACAGCCCAATGTTTCATAG
AMATAATTGAGACAATTATRGGGACTGTTAAATGCACAAGAGTAGCCATT
AGGGGCCCTCATTCCCCTCAAAACCTAACAGGATCTCAAATTTTAAACTC
TTAAGAGAAAGTTGAATTTCTGTTGAAAAAATCAAATGACTCCATTGCAT
CATTTTCATCTTTGTTTTGAGCTTGGATTTTTTACATTTCATAATTTTAA
GAGTCATCATTTTCTTTTAAAATCCTATTGTGTTTTGCCGCGAACCTAAC
GCCGTGTATATTTAGACTAGTACTGCCGGCGTTAAACATTCCTTATTTGT
GGTGTTGGAGCAGACTTAGAACTGATCTACTTATCAGTCTTATTTCACCM
CCCCTCTCAGTCTTTTTTTTTTTTTTATTAGTCCGATCTTTTTTACTACT
CAATGGTCCTTAGAACTGATCCATATGTCTTTCAGTCTAGGTTATGCGAC
TCAAATGACGTAGTTAGTAGTTTAAATTCATCTGTTGTAGTTTTTACTAA
AGACCGATAAGGACCAGTCTAGGACTGGCAAATTTTATTCGGACCGGACT
GACAGAACTGCAGTCTGTTTAGTTTTTCTAGACCGATCCAACACTAACTT
TTGCTTATTATTCAAATTTCTGGTATGAGTTAAGAGTTTCTGCTCTGGTT
TAGAACCTTTATTTGATTGAAAGACTTATAAAATATATGGATGTCCCATT
CTTTTATAGTGAGACTCAATTTTGTTCACTTTGAGTGCAATTTGCAGCAC
ACCCAAAGGAAATAATGAAGAAAATTGGGGATAATTTGTATAAGAATAGA
AATCTATCTAATCCAGGCTCAACTTTGAGAAAATCATTCATGCCTGTTTT
TGTGTTAAGGGAGCATATATTGTATGTATATACATAAATACACCCAGTCT
ATCTCTTCCTCTGTTGTAAAGATATATACCTTCATTTTTGTATGCAGAAA
CTTAATATATATTTATTTAAAGTTCGTTCACATTTTCGTGAAAATAATAA
TAAAAAAATTTGCGAAGTAACGAGTTGTGTTGGAAGGAACAAAAACGACG
TCGAGGGGAAGGTATGCATTTTGTGAAGCAGTAGTAGTAGGCCTCCTCCA
CCTTCTTCTCCTGAAGGAGTAGTATGTGTATAAGGTATTCACTCTTCTTA
ATGCACAATACAATATACAGTATGTTGGAATGAAGAACCTACTTCTTTAT
ACCTGAAGCAAAAAAAAACCTCTCCGTCCCTTTAAATAAATGTACTGGCA
CATATTTCCGTTCTGTAGTCACTGTAGATTATCTTATTTATACCATCTGT
TGAATTCTAGACAGATGAAAAAATTTGCATCATGAGAGATTTAAAATATG
TAAACCCTATGCACTAAAATATAGACGACGTATAATAACAGGCGTGTCCG
CAGGATCATAATTTGTCTGTGTTTTGGAATTTGTTTGAAAAAAGAAACCC
AAAAATAAAATAAAGATTGGAAAAAATTTCAAAAATTCCCAGCTATTCAG
ATAAAATTGAATTTTTTGGGAAAATAATGTAAAAAATCCATAGCTATTCT
CAAAAAATTTCAAATATTGAATTTCTTGGGGAAAAAATTTCAAAAAATCT
ACAGCTATTCACAGAAAATTAATTCTTTTGGAAGAAAATTTCAAAAATTC
AGAGTTATTCACAAAAAATTTCAAAAATCCATAGGTATTCACAAAAAAAT
TTATATTATTAAAATTTTTGGGGAAAAAACAGTTAAAAATTTACAGCATT
CACTAAAAATTAATTTTTTCGCGAAAAAAAATCAAAAATCCACAGTTGTT
CTCAAAAAATTTCTAATATTTAATTTTTTTGGAAAAAAAATTGTAAAAGC
CATAGTTATTTTCAAGAATTTAAATTTTTGGAAAAAAAATTTCAAAAATC
CAACGCTGTTAACTAAAAATTACTAAAATTTAAAAATTAAATTTTCTTGT
AAAAAGTAAAAATTCCTTAAGTTGGGGGGATACAGCATCCATCCCACCCC
CTGCGACACCCCTGAACAAAGATCTCATTCTTGATCAATATAAAATGTAG
TATTTGAAAAAGTTSCATCTTTTTTYTTMTAAAAAGGTGTAGTATTCGTA
TCGNNNNNNCACATTACACATCCWTATAAATAATGAATAATAAATATTAA
TACACGTTGTGCCATGTCCTTGATATGAATCATTGTATTGTTGTTGTTGT
CGTCATTGCTGTGTGTTTTTTGCCAGGGACGTCCACAGGGGGTGGGTTGG
AAGGACTTTCCCCCCCCCCCCCAAAAATGWAGGATTTTTCKCTTTTTACT
AAAAAAATTAATTTTTCAAATTTGTTGCCAAAAAAATTTATATTTGAAAT
TATATTTTTCAAATTTTTTGTAAACAGCTGTAAATATTTGGACTATTTTT
TCCAAAAGAATTTAATTTTTTGTGGATTTTTGAAATTAAAAAAAATATAT
ATATATTATTTTTCAATTTTTTTCCAAGAAATGTTATTTTTTGGATTTTT
TTTTTTTCTAAAAAATTCCAAAAATCAAACTCCCTAAAAAAATATATATA
TATTCCTACGGACGCTCCTGCTTGGTTCTTGGTTCATTCTATGATGAACA
AACACATCCTTTTAAAAAAAATGTGTTTATTATAGATAAATAAATATAAG
TCATTTCTTTAGAAGACTTATTCAAGAAGTTACCCGTAGTTTCGGCCTTA
CAACATGACGAAATAAGATTAAGTCTCTTTCGTCTTCTTCTCGCTTTCAT
TCACCGCTAAGTAATTAATATAGCAGGCAGCGCGAGCACTCCATTTAAAT
CAACAGTGAATAGAAATAATCACATTTTATATTCAGTATATTAGTGGNNA
CAATCATACGCACGTGTCATTACTAAAAAAAAAGTTATATATTCCAGTGT
TTCCTTGCCTCAATATTTTCTAATTGTGATTTCGTTTGATTTTCAGTTAT
TTTTTCGTGATTATATTTTCATCAAAAAAGAAGATGTAAATTAAATTTCA
AAGCGAAGAAATCCAATCAACTCCCGAAATATAAGAAAAACACTCTCAAT
TACTTATAGCATATAATAGTATACCTATTAGAATAGACAATATATATATA
TTTAGAAGACAAAAATAAACACTTTTCTGAATAAAAAAGAAGACAAATAA
TTAATATAAAAAAGAATGGAACCCATCAATAAGGAATCATCAAAGTTCAG
CTCACATCATGTTAATCAGGTAAGAGAATCATACTTATACAATAAGGAGT
CATCGTACTTATTATTTAACCCCTGATTACTATTATTTAATTATTCATAC
ATACGTTTAATTACACACCAAAAAAATAAATGCTAATTTATTCAATTTCC
TTCTTTTTGATGATATATAATATGAATAATATTAAAATGACAAATGTTCT
ATTATTTGCAGATTATAGCAGCAATTGCTGTTTCCTTCGGTCCATTCGCT
GTAGGAATGGGAAAGGGCTACACATCCCCCGCACTTGCTTCACTTCAAGT
CAGATTAGGAGCCGATGGTAGAAGGATACCATCAACAAACAGCGCATCAG
ATTTAACTATCACAGATCAAGAAGGCTCATGGGTAGCTAGTCTATCCCTA
CTAGGGGCTCTTTTAGGAGGAATATTCTCAAGTCTTATTCTCAAGCATGG
AAGAAGAAGGATTCTACTATTTGTTTCCCTACCCTTCTCTCTATCATGGC
TTCTCACAACCATTGCATCTAATGTGGAGATGATTTACGTCACGGCGTTT
GCTGTCGGATTTTGTTCAAGCATAGTGCAACTCGCTACACAAGTAAGGGA
TTTACCATAATTCATAAATCAACTCCGTTGTTTTTTCACCTCTCAAAATT
TATAATACTTTTATTTTTTCTATCATCATGATCGTTCAAATCTCTATGTA
CATAACATTTATATAATACAAATACAACCCGCTCCATGTATACATACTTA
ATTTTTTCCTTGTTTGACTTACAGGTATACATAAGCGAGATTGCTCATCC
GTCGATACGCGCGAGTCTCTGTTCCAGCTCAAAAGTGTTTTCTCAAGTTG
GACTTTTAACATCATTTGCCCTTGGGGCATGGCTTAATTGGCGACAATTA
GCCATTGTGTGCGCTATTGGACCTATTATGACCTTCATAGCTGCACTTAA
TGTTCCAGAAACGCCCAGTTTCTTAGTGTTTACGAATCAAGATAAAAGGG
CAGAGAGATCCCTAAGGTGGCTCCGAGGAGCATCTTACTACACACACGAT
GCTTTTGATGACGATAACATGGGTGTTTCTGAAGAGCTTGCAACCCTCCA
TGCCAACATCCGCATGAAAAGAGAGCAACGATCCTGTTGCTCTAAAAAGG
TTGTCATGTCTCAATTATTCCGCCCATTGTCCATTACTTGTGGTGTAATG
TTTTTCACTAGGTAAGATCCCCCATTTGCTTTGTTTCCCCATCTTTATTT
AGTCACTCATTAATTATTCCTTTATTTGACTTCTAGATTCTCTGGTGTGA
CTGCCTTTAATTTCTACGCCGTCCCTATTTTCCGTGAAAGTTTTGAAAGC
TTCAACCCACATTTGGCCGCTGTTCTCACTGGAAGTGTCCAATTAATATC
ATCTGCAATGAGTGGTATTTTGTGCGATCTGGTTGGTCGTCTCCCACTTT
TGGTCATCAGTTCTGTACTCATGTCAGGAGCCTTGGCTGGATTTGGAGTA
TTTTCTTATTTCCAAAGATCCGACTTTATTGAAGCTACAGAGGGAGGAGC
AATCCTATCCTACGCTCAACATGATTGGATACCTTTAGCCTGTGTTGTAA
CATTTGTTGCCGCATTTTCTCTCGGCCTCAACCCTATTTCCTGGCTTCTC
ATCGGGGAAGTTTTCCCTATTGAGTACAGGAGTCTTGGACCTGCTTTAAC
TACGAGCTTTGGCTATGTGTGTGCTTTTATTGGAGTTAAAACCTTTGTGG
ATCTAAGGCTCTGGCTGGGACTTTTTGGAACTTTTTGGACATATGCCGTC
ATCGCGGCAATTGGTCTTCTATTTACATTATTATATGTACCCGAAACTAA
AGGAATGTCATTAGATGAAATGGAACCTAAAACTTGCAGTATTTTAAAAT
CTTCGGACGACCCATCCAAGGTCTAA back to top
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