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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s221 | supercontig | LSalAtl2s221:469662..476711 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004194 >EMLSAP00000004194 ID=EMLSAP00000004194|Name=EMLSAP00000004194|organism=Lepeophtheirus salmonis|type=polypeptide|length=1834bp
MPFDSKSWTYPSAEGLYDPALEKDACGVGFIVNIDGRTSHDIFEDAAELS
RRMEHRGACSADNDSGDGAGVLIAIPKDYYQKKLSEVNVQLPRLYATGII
FCDESDESDVKKDFEKHAESLKGNLRVIHWREVPKDSNSLGSVARASEPK
LLQVFVTSEEEGIENKCFDKYIYILRKTATHYIPACKDSRKRFYICSLSR
TAIVYKGQFNPCQIWNYFTDLMDPEFESHLLIVHTRFSTNTFPSWERAHP
NRVLAHNGEINTLRGNVNLMEAREGVMVSPDFEDLSTLYPIVEPDMSDSG
CLDNVVEFLVHVGDRSLPEAMMTLVPEAWQNDDQMPSNKKNFYHWASFYM
EPWDGPALLTFTDGRYVGAILDRNGLRPSRYYITKNNRMXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXASEVGVIDIDPTQIIKKGRLQPGKILLV
DTDVQKVIDDHELKSSIAXSRPHGDFLNKSIDLKIIKEAGSEYAAEISSL
PRRRPINLHENDFNNNFDYGEENILEKLWRGDRRLPIFGYNIETLEMLML
PMFKTKKEALGSMGNDTPLACLSEMQPLIYEYFKQLFAQVTNPPIDPFRE
KIVMSLECPIGPEGNILNPGDCTRLWLKNPILSVNDLEHLKRTSILGWKS
RVIDITYLSDDQISLSDIVSNICNRAEEAVKKEGVQLLILSDRNVGVNRI
PVSAALASGAVHHHLIATRLRSKCAIIVESGEAREVHHLCVLIGFGADAI
CPYMVLEIAAMLKDEGVEATKYENKNAYQKYVDATMETIKKCSIRGQFEI
DFSKGTPVDVSEVELASNIVKRFVTGAMSFGSISAEAHGTLAVAMNKLGG
KSNTGEGGENEERYLNDIRRSAIKQVASGRFGVSASYLAHADELQIKMAQ
GAKPGEGGELPGYKVTVEIAKTRRSVPARISVKLVSEVGVGVIAAGVAKG
KAEHILISGHDGGTGASSWTGIKGAGLPWELGIAETHQTLVMNNLRSRVV
LQTDGQLRTGFDVMVAGILGADEFGFSTAPLIVLGCTMMRKCHLNTCPVG
IATQDPILRKKFEGQPEHVVNYFFLIAEEIREFMAKLGCTKFNDLIGHTE
FLKVTENPIPSKTHLLNFNSLLHSAESMRIPKKHGGSIPQDFQLNLRLDN
EVIKACDTIINSDSLNPISLEYPIVNTQRTFGATLSYHIAMKYNESGLPR
DNIINISLHGSGGRNFAAGMSGGIAYVVKKGNETFETKCXXEMVELVEPK
SMEDEDKSFLLKTLQDFVEATGSEVAAAILSGNPFESFIKVYPMEYRXAI
ENKRRGSSVEKQKEATKPPLNEHEEEIIKDIEDLRIEPKKSALDKTKGFM
KYPRVYDNYRDPESRTKDWDEIYDFPKVRKSLKVQAARCMDCGVPFCHSN
NHGCPLGNVIPRFNDLVFHDQWKEALKTLLQTNNFPEFTGRVCPAPCEGS
CVLGINSPPVTIKNIECAIIDKAFENGWIKAQPPLKXKTIAIIGSGPSGL
AAADQLNKAGHNVTVYERNNRIGGLLQYGIPSMKLSKEIVQRRVDLMTEE
GINFKVNSTINESNILELKKEYDALLFCTGSTIPRDIPIPGRKSTGIHFA
MEFLQKLQQKNLGDEVKTIDAKDLDVIVIGGGDTGNDCIASSLRQGAKSI
TTFEILPQPTELRGEDNPWPQFPRIFKVDYGHQEVIVKNGNDPRRYSTMS
KEFLSDENGRISGIRTVCVSWEKDDKGRWVMSEVPNSEKLYPAQLVLLCM
GFLGPDKKVLDYLNIELDPRGNIQTKDYAVGNGIFAAGDCRRGQSLVVWA
ITEGRQAARKLDEYLIGSGVSQLPIVGGVIVPPV back to topmRNA from alignment at LSalAtl2s221:469662..476711- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004194-700041 ID=EMLSAT00000004194-700041|Name=EMLSAT00000004194|organism=Lepeophtheirus salmonis|type=mRNA|length=7050bp|location=Sequence derived from alignment at LSalAtl2s221:469662..476711- (Lepeophtheirus salmonis)
ATGCCTTTTGATTCGAAAAGCTGGACGTATCCTTCTGCAGAAGGTCTCTA
TGACCCAGCTTTAGAAAAGGATGCTTGTGGAGTGGGCTTCATTGTAAATA
TCGATGGAAGAACCTCACATGATATTTTCGAAGATGCTGCGGAGCTTTCT
CGGAGAATGGAGCATCGAGGAGCATGTTCTGCAGATAATGACTCTGGTGA
TGGTGCAGGGGTATTAATTGCAATTCCCAAAGACTATTATCAAAAGAAAT
TAAGGTACACAAACTGCTTTTAAGAGTGATTTATAAATTTATCGTTCATT
TTTTTTTTTAGTGAAGTGAATGTTCAACTTCCTCGTCTTTATGCTACTGG
AATCATATTTTGTGATGAATCCGATGAATCTGACGTAAAAAAGGACTTTG
AGAAACATGCCGAATCCTTGAAAGGAAATCTCCGAGTGATTCATTGGCGA
GAAGTACCCAAAGACTCAAACAGTCTCGGATCTGTTGCTAGGGCTAGTGA
GCCGAAATTACTTCAAGTCTTTGTGACATCAGAGGAAGAGGGCATTGAGA
ACAAGTGCTTTGATAAATACATTTACATCCTTCGAAAAACGGCAACTCAT
TACATCCCGGCTTGCAAGGACTCAAGAAAAAGATTTTATATTTGTTCTTT
ATCTAGAACTGCGATCGTTTATAAAGGACAATTCAATCCATGTCAAATAT
GGAATTATTTTACTGATTTGATGGACCCTGAATTTGAGTCCCATTTGCTT
ATCGTTCACACTCGCTTTAGTACTAATACTTTTCCATCATGGGAGAGAGC
TCATCCTAATCGAGTACTGGCTCATAATGGGGAAATCAATACTCTTCGAG
GAAATGTTAACCTCATGGAGGCTCGTGAGGGTGTCATGGTGTCTCCAGAT
TTCGAGGATTTATCTACCCTCTATCCCATTGTAGAGCCAGACATGTCTGA
TTCGGGATGTCTTGATAATGTAGTTGAATTCCTAGTCCACGTGGGTGATC
GAAGTCTTCCTGAAGCAATGATGACTCTTGTACCAGAGGCTTGGCAGAAT
GACGACCAAATGCCTTCAAATAAAAAGAACTTTTATCATTGGGCCTCATT
TTATATGGAGCCCTGGGACGGTCCTGCCCTTTTAACATTCACTGATGGTA
GATACGTAGGTGCAATTCTGGATAGAAATGGCCTCAGACCCTCTCGATAT
TACATTACGAAAAATAATCGTATGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGGCTTCAGAAGTAGGAGTTATTGACATA
GATCCGACTCAAATAATCAAAAAAGGACGACTCCAGCCTGGTAAAATCCT
TCTTGTCGATACAGATGTACAAAAAGTAATTGATGATCATGAACTCAAGT
CCAGTATAGCTARCTCTCGTCCTCATGGAGATTTTTTGAATAAGTCGATA
GATTTGAAGATTATAAAAGAAGCAGGGAGTGAGTACGCTGCAGAGATCTC
ATCCCTTCCAAGGAGACGCCCCATTAATCTTCATGAAAACGATTTTAACA
ACAATTTTGATTATGGAGAGGAGAACATCCTGGAAAAATTATGGCGAGGT
GATCGGCGATTACCTATTTTTGGATACAATATCGAAACACTTGAAATGCT
GATGTTACCTATGTTTAAAACAAAGAAGGAAGCTCTTGGATCCATGGGAA
ATGACACGCCTCTTGCTTGCCTCTCAGAGATGCAACCCTTGATCTATGAA
TATTTCAAACAACTTTTTGCACAAGTCACAAACCCACCCATTGACCCTTT
CAGAGAAAAAATAGTCATGTCGCTTGAATGTCCCATTGGACCTGAGGGAA
ACATTCTAAATCCCGGGGATTGTACTCGTCTCTGGTTAAAAAATCCTATC
CTATCTGTAAATGACTTGGAACATCTGAAGAGAACCAGCATTTTGGGTTG
GAAGTCGAGAGTCATTGACATTACATATCTTAGCGATGATCAAATTAGCC
TTTCGGACATAGTATCCAACATTTGCAATAGAGCAGAGGAGGCTGTGAAA
AAGGAAGGCGTTCAGTTACTTATTTTATCGGACAGAAATGTGGGAGTGAA
TCGAATTCCAGTCAGTGCAGCTTTAGCATCTGGAGCAGTGCATCATCATC
TCATTGCAACAAGACTAAGGAGCAAATGTGCCATAATTGTAGAATCTGGA
GAAGCAAGGGAAGTGCATCATTTATGTGTACTTATTGGTTTTGGTGCAGA
TGCAATTTGTCCCTACATGGTTCTTGAAATTGCTGCAATGCTCAAGGATG
AGGGGGTAGTTGAGATTTCTGAGGAGGAAGCTTTTCAGAACTATGTTGCG
GCTGTGGATCGAGGTATTTCAAAAGTCATGGCAAAGATGGGAATATCCAC
GATGCAATCATACAAGGGAGCTCAAATATTTGAGGCATTAGGTACAATAT
CAGGGACGTCTGCAAGATTATATATTTTTTTTTTAGAGGGGTTGGTTGTT
GGAATTTCTTGAAAAAAAATAAATAATCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGTTGTCAGAAAATAAAATTTTTTGGAAAAAATACAAC
AGCTRTTCACAAAAGTTTTTATTTTTTCGAGAAAAAAAAATTACACGTAT
TTTAGCATAAATTTTTTTCATTCTGACCAAAAAAAAAAAAAGAAGTAAAA
ATCACTCTAGCCTACCCTATGTGGACGCCCCTGAATAATAAGAATAGCAG
GCATAGGGATTCATTCACATTTTTTTTTTTTTGTTACAGGCATATCCACT
GAAGTGGTGGACAAGTGTTTCCGTGGAGCACCTACGAGAATAGGAGGTGT
CACTTTTGACACTCTTTCCAATGAGGCATCCCAAAGACACTTTCTTACAT
TCCATTCAAATTTGGATTCACGAGTTCTTCGAAATCCAGGATTTTTCCAC
TGGAGATCCGGAGGAGAAGAGCATATTAATGATCCTGCAAGTATTGCATT
TCTTCAGGAGGCCACAAAATATGAAAATAAAAATGCGTATCAAAAGTATG
TGGATGCTACGATGGAAACGATAAAGAAATGCTCTATCCGTGGTCAATTT
GAAATAGATTTTTCGAAAGGAACTCCTGTTGATGTTTCAGAAGTGGAGCT
TGCATCGAATATCGTTAAACGTTTTGTAACAGGAGCGATGTCGTTTGGAT
CCATCAGTGCTGAAGCACACGGTACATTGGCAGTGGCTATGAATAAATTG
GGAGGKAAATCTAATACTGGAGAAGGAGGGGAGAATGAAGAGCGATATTT
GAATGACATACGACGCTCAGCCATCAAGCAAGTCGCCTCTGGTAGATTTG
GCGTATCTGCTTCATATTTGGCTCATGCTGATGAGCTCCAGATTAAAATG
GCTCAAGGTGCAAAGCCAGGAGAGGGAGGTGAACTTCCAGGATATAAAGT
TACAGTGGAAATTGCAAAAACTCGGCGCTCTGTTCCCGGTGTTGGCCTCA
TTTCTCCACCACCCCATCATGACATTTATTCAATTGAGGACTTGGCCCAG
TTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCCATCATGACATTTATTCAATTGA
GGACTTGGCCCAGTTGATATATGACTTAAAGTGCATTAATCCTAAAGCGA
GAATATCTGTGAAGCTGGTCTCAGAAGTAGGCGTGGGCGTGATTGCAGCA
GGTGTTGCAAAAGGAAAAGCAGAACATATACTTATTTCTGGACATGATGG
AGGAACTGGTGCTTCATCATGGACGGGTATCAAAGGAGCAGGTCTTCCCT
GGGAACTAGGAATTGCTGAAACTCATCAAACACTTGTTATGAATAATTTG
AGATCCCGAGTTGTACTTCAGACAGATGGGCAATTAAGAACGGGATTTGA
TGTGATGGTTGCTGGAATCCTAGGAGCGGATGAGTTTGGATTTTCAACAG
CCCCTCTCATAGTCTTAGGTTGTACCATGATGAGAAAATGTCATTTGAAT
ACATGTCCCGTTGGTATAGCTACACAGGATCCAATTCTACGCAAAAAGTT
CGAAGGCCAACCAGAGCATGTTGTGAATTATTTTTTTCTGATTGCTGAGG
AAATAAGAGAGTTTATGGCTAAATTAGGATGTACTAAATTTAATGATTTG
ATCGGACATACGGAATTTTTAAAGGTCACTGAAAACCCGATTCCATCTAA
AACTCACCTTTTGAACTTTAACTCCTTACTTCACTCTGCAGAAAGTATGA
GAATCCCTAAAAAACATGGAGGTTCTATACCTCAGGACTTTCAACTAAAT
CTGCGCCTCGACAATGAAGTTATTAAGGCATGTGACACCATCATCAATTC
GGACAGCTTGAATCCAATATCTTTAGAATATCCCATAGTTAATACACAAC
GAACATTTGGCGCTACATTAAGCTATCATATTGCAATGAAGTACAATGAG
TCTGGTTTACCTAGGGATAATATTATAAACATATCACTTCATGGATCTGG
TGGTCAGAGTTTGGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGGATTGCATCCGAAAGATTCTGTGTTCGAAATTC
AGGAGCTGTTGCAGTAGMTGAGGGYGMAGGAGATCATGGTTGMGAATATA
TGAKTGGMGGYAGYGTTATAATTTTGGGTACAACAGGACGAAATTTCGCT
GCTGGAATGTCGGGTGGGATTGCTTATGTTGTAAAAAAGGGAAATGAAAC
ATTTGAGACMAAGTGTAWTARGGAAATGGTTGAGTTGGTTGAGCCAAAAT
CCATGGAAGATGAGGACAAATCATTTCTATTAAAAACACTGCAAGACTTT
GTTGAGGCAACGGGCTCTGAGGTTGCAGCGGCAATTCTAAGTGGAAATCC
CTTCGAGTCCTTTATTAAAGTGTATCCCATGGAGTATAGAKAAGCCATTG
AGAATAAAAGGAGAGGAAGTAGTGTTGAGAAACAGAAGGAGGCGACAAAG
CCGCCTTTAAATGAACACGAGGAAGAAATAATTAAAGATATAGAGGATTT
GAGGATTGAGCCCAAAAAAAGTGCCCTTGACAAAACAAAAGGATTCATGA
AATATCCACGAGTTTATGACAACTATAGGGATCCAGAGTCACGAACTAAA
GATTGGGATGAAATATATGACTTTCCAAAGGTTAGGAAGAGCTTAAAAGT
TCAAGCAGCTCGATGTATGGACTGTGGAGTGCCTTTTTGCCATTCTAATA
ATCATGGATGTCCCTTGGGAAATGTTATACCTCGATTTAATGATCTAGTT
TTCCATGATCAATGGAAAGAGGCTCTTAAAACCCTACTTCAAACAAACAA
CTTCCCAGAATTTACAGGAAGAGTCTGTCCGGCGCCATGCGAAGGCTCCT
GTGTTCTGGGTATCAACTCACCTCCTGTCACCATAAAAAACATTGAATGT
GCTATTATTGATAAAGCTTTTGAAAATGGGTGGATCAAGGCACAACCCCC
ACTCAAAAGNAAAACTATTGCCATCATTGGTAAGTAAAGTCTAGTATTCA
TTTTACACAATTATATTCTTGTTATAATTATTTCTATGTATTTTAGGCTC
TGGTCCCTCCGGACTTGCTGCAGCAGATCAATTAAATAAAGCTGGTCACA
ATGTAACTGTTTATGAAAGGAACAACCGAATCGGTGGKCTATTACAGTAC
GGAATTCCCTCTATGAAGCTATCAAAAGAAATTGTTCAAAGAAGAGTTGA
TCTTATGACAGAGGAGGGAATCAACTTCAAAGTGAATAGTACAATTAATG
AGAGTAATATTCTGGAGTTAAAAAAAGAATATGATGCACTCCTCTTCTGT
ACTGGGTCAACTATCCCTAGAGATATTCCTATTCCAGGTTTGTGGTTGGG
AAAAAAATAATAATAGTTCTAACTACTTTATTAATTATCCATTGAAATAC
TTCCAGGGCGTAAATCAACAGGAATACACTTCGCCATGGAGTTTCTTCAG
AAACTTCAGCAAAAAAATCTAGGTGATGAAGTGAAAACGATTGATGCTAA
GGATTTAGATGTCATTGTTATTGGAGGAGGTGACACGGGTAATGACTGCA
TCGCCTCTTCCTTGCGACAAGGAGCAAAATCAATTACAACTTTTGAAATT
CTTCCACAACCTACTGAACTAAGAGGGGAGGATAATCCCTGGCCACAATT
CCCTAGAATTTTTAAGGTATTTGATTATAAACTTACATACAAACGAAACA
AATAATGAAAAGTACATTTATTGCAGGTGGATTATGGTCATCAAGAGGTC
ATTGTTAAAAATGGAAATGACCCCAGACGCTATAGTACCATGAGCAAGGA
ATTTCTAAGCGATGAAAATGGCCGTATTTCTGGAATACGAACAGTATGCG
TTTCATGGGAAAAGGATGATAAGGGAAGATGGGTCATGTCTGAAGTGCCT
AATTCTGAGAAACTATATCCTGCTCAGTTGGTTTTACTCTGTATGGGCTT
TTTAGGACCAGATAAAAAAGTATTGGACTACCTGAATATAGAGTTGGATC
CCCGAGGGAACATTCAGACGAAGGACTACGCCGTGGGGAATGGGATATTT
GCTGCAGGAGATTGTCGTCGAGGACAGTCTTTGGTGGTATGGGCAATCAC
TGAGGGAAGACAGGCAGCAAGGAAGTTGGATGAATATTTGATTGGATCTG
GGGTTTCTCAGCTTCCAATCGTTGGAGGGGTCATTGTACCTCCTGTCTGA
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