EMLSAT00000004218, EMLSAT00000004218-700065 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004218
Unique NameEMLSAT00000004218-700065
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2222supercontigLSalAtl2s2222:16844..17707 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004218 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004218EMLSAG00000004218-686984Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018305EMLSAE00000018305-727233Lepeophtheirus salmonisexon
EMLSAE00000018306EMLSAE00000018306-727234Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769258auto769258Lepeophtheirus salmonispolypeptide
EMLSAP00000004218EMLSAP00000004218Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004218

>EMLSAP00000004218 ID=EMLSAP00000004218|Name=EMLSAP00000004218|organism=Lepeophtheirus salmonis|type=polypeptide|length=129bp
MNKKAKKCHLCSKVYVSMPAFSMHMRTHNQTCICSICGKSFSRPWLLQGH
LRTHTGERPYLCSICPKAFADKSNLRAHVQTHSKNKPYRCQNCGKAFALK
SYVYKHEESTCLHKSSNPGGVHLREDSRP
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mRNA from alignment at LSalAtl2s2222:16844..17707+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004218-700065 ID=EMLSAT00000004218-700065|Name=EMLSAT00000004218|organism=Lepeophtheirus salmonis|type=mRNA|length=864bp|location=Sequence derived from alignment at LSalAtl2s2222:16844..17707+ (Lepeophtheirus salmonis)
ATTTTTTTTTTTTATTCTCTCTCTCTCTCTCTCTCTTAGATCCCTTAATG
AATAAAAAGGCCAAGAAATGTCATTTATGCTCCAAGGTCTATGTGTCCAT
GCCTGCTTTCTCCATGCATATGCGAACTCACAATCAGACATGTATTTGCA
GTATTTGTGGTAAATCCTTTTCACGCCCCTGGCTGCTTCAAGGCCACCTA
CGAACTCATACAGGTAAAAAAACAAAACGAAGTTTATTTACAAAAGTATG
TATTGCTTTCCTATTTTTTCCTTCCTGGCTCTTCTCTCTCTCTCTTTCTT
CGTATCCACATGTGGTGCTTGAAGGGGGATATACTATATAGCAAAGAAAC
AACAAGTTATTTATTTATCTAATGTTTTCTTTTTTGTTAAAGGTGAACGA
CCATACTTGTGCTCAATCTGTCCCAAGGCGTTTGCTGACAAGTCCAACCT
TCGCGCTCACGTTCAAACACATTCTAAAAATAAACCTTATAGATGTCAGA
ACTGCGGGAAAGCTTTTGCTCTCAAATCCTATGTCTATAAGCATGAAGAA
TCCACCTGTCTACACAAGAGCTCAAATCCAGGGGGAGTTCATTTACGAGA
AGATTCAAGACCTTAAGTCATTCGAGTATGGAGCTCACCATTTCTAATTA
TTTATTAGAATAGTACGGAAAGAGACGACTCTAAGGAAAGGAACCACAGG
CAGATCATTCAGAAAATTATAAATTCATCTATTTAGGGATGGTACTTTTG
TAAAGAAATATTATAGTTGTATTTTCCTAACGACCTATAAATTCCCGTCC
TTTGTCATTGTTTTTCTTTTTAAGGTTGCGTGACTGTAAGTGTTATATGT
CCTTACTCTTTCAA
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