EMLSAT00000004222, EMLSAT00000004222-700069 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004222
Unique NameEMLSAT00000004222-700069
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s222supercontigLSalAtl2s222:1009525..1011516 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004222 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004222EMLSAG00000004222-686988Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018314EMLSAE00000018314-727242Lepeophtheirus salmonisexon
EMLSAE00000018315EMLSAE00000018315-727243Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780251auto780251Lepeophtheirus salmonispolypeptide
EMLSAP00000004222EMLSAP00000004222Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004222

>EMLSAP00000004222 ID=EMLSAP00000004222|Name=EMLSAP00000004222|organism=Lepeophtheirus salmonis|type=polypeptide|length=113bp
MEMDLTEQKDEVMVLYEIYRNKLFEFDEKHSKGQISNAIELNGSVIKIGV
SKRTINDKCSTNFCYICGTKLFASNPYAHFSDVRSPCANLLFDFINNEAD
FEVPLEDEWFFDE
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mRNA from alignment at LSalAtl2s222:1009525..1011516-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004222-700069 ID=EMLSAT00000004222-700069|Name=EMLSAT00000004222|organism=Lepeophtheirus salmonis|type=mRNA|length=1992bp|location=Sequence derived from alignment at LSalAtl2s222:1009525..1011516- (Lepeophtheirus salmonis)
ATGGAGATGGATTTGACAGAGCAAAAGGATGAAGTCATGGTTCTCTATGA
AATATATCGAAATAAGCTTTTTGAATTCGATGAGAAACATTCCAAAGGTC
AAATAAGTAACGCAATCGAACTAAATGGATCAGTAATCAAAATTGGAGTT
TCCAAACGCACCATAAATGACAAGTAAATCTACGTTTAATTAAATTGTTT
CTATAAAATAATAATAATTAACATTTGCACTGGTTAGTCATGAAAGGGAA
ATCCATCTTTCCAAAGATTTGGATCATATTCCTCCCATATCGCTTGCATT
TGAATTTCCAGACAATTATCCTTCGTTGTCTATGCCTAAATTTAGTCTCT
CATGTTTATGGCTCAACTCAAAACAAGTAATTATTACAAATACAATATTA
ACCAGGAGAATAACAAATTGGACTTTTATTCAAGATACTTCTTCTAGAGG
AGAATTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCGATGAATTGCCCCA
ACTGTTTCTCAGCCATCCAAAAGTCTGAAGGGTGTAACAAAATGTTTTTG
CACTTAAGTGAGTATTTATTTTTTAGATGCGACCCTTAGAAATATTTTAA
TTGGGTGGTAATATGTTTTTTAGGTGTTCAACAAATTTCTGCTACATTTG
TGGTACTAAATTATTCGCTTCAAATCCTTATGCACATTTCTCTGATGTAC
GAAGTCCCTGCGCCAATTTACTTTTTGATTTTATTAATAATGAGGCAGAT
TTTGAAGTACCTTTAGAAGATGAATGGTTTTTTGACGAATAA
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