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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s222 | supercontig | LSalAtl2s222:1368391..1372119 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004238 >EMLSAP00000004238 ID=EMLSAP00000004238|Name=EMLSAP00000004238|organism=Lepeophtheirus salmonis|type=polypeptide|length=720bp
MAIIMKNYMKSLIQQQSPSLSSSNSSKIDLFDNLIILQDKVESGKDSLHD
ESITKSPSWEQQQQMQIHSYSMNCKHNNNNSKNNLVPPAPLSHTGIYRTL
SDTSAEFLDKRKKLESEDSSYDSDYELSGMSKSHDDVSRTFSDTLASEFS
EYVSLAXSSSKSQQEEEGGCDEFSFSSDPDYNGKVEFALRLGYPESLLVK
ALRKLGPLAGQDKILAELIRLQNSKPSVLHTDLEKPVPQEEITTLCKSTL
GEENEKDSLLPIVIDGSNVAMSHGNKEIFSCRGIQLCVNWFKEKGIKNIT
VFVPRWRKESSKPESPISDQHILNELEKERILAYTPSRQVGGRRFNMINS
FYFRFMPPDDPMGKNGPTLHAFLRGLSRNSDIHHSMPCPYGKKCTYGNKC
KYYHAERGNLPQKSITDKLKEHSTLRISEVRARIHSRDSSPGDPLTRTLS
VNMPPRIHEKQQLCRTQSNISSRIFDRSHTNNQLYASQQMPQQQNLLTTS
PSSSTHHKVYNSKSISFENLPPLNASPSYTDYSVPPPPPRTPWQQQQSGS
SSPRRHSTTSSPYKLDSNNAHLKLSRQLSLNPCYDPRLQRFLCPPPTSHQ
NVSRIASAPEFYIGGSNLGFGTSLTYVTPDTPTLLQKTVSDSVSVDSSEW
NSGTSERINYGPIGSSRKNSCNVVSSRHKLFVHLKEIFSENQVXXAMSVL
PDETDGQKICEHIISMNSQK back to topmRNA from alignment at LSalAtl2s222:1368391..1372119- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004238-700085 ID=EMLSAT00000004238-700085|Name=EMLSAT00000004238|organism=Lepeophtheirus salmonis|type=mRNA|length=3729bp|location=Sequence derived from alignment at LSalAtl2s222:1368391..1372119- (Lepeophtheirus salmonis)
CAAGTCACGAATTATCTTCACCATTATTCAGAAGAGACAGTATTCAGTAT
GGCTATCATCATGAAGGTAAGATTGTAGTGATGTGTAGGAAAGCTCTCAT
TCTTCTACGTACATATTTTGTCTTGTTAAACAAATGAATCATTTCAAATT
ACGAAAACAATGGACTATATCCGGGATGTGTAAGAATATGCGCAGTGCGC
AGTAGGATGTATAAAAAAGATTAGGGAATGAAGGAGGGTGAACGGGTATT
ACCAGTTTTTTTTTAAATATATATTATGTTGTTATAACTTGTATAACCAA
AGTGTACAAGTTGCAACTCAAAAATGCGATGAACAACTTTAAATGAAGGA
TGTTCTGCACTTAGTATTAGTATCAAGGGCGTCCGCAGGATTATATATAT
ATATATTTTTTTTTTTGGAGGGGGGGAGGGATTTTTTACAAAAAATTTAA
AAAAATTGATTATTTGATCGAATGACCTTTATTTTAGAAAATAAATCCCC
TTAATTTTTTTCTCCCATCTTTTCTCCTCATAATTTTTTCTTCCACATCA
ATCATTTTTCAAAAAATCCTTGATTTGAAGGGGGCTACAGCCCCACACTC
TACAGATGCCCCTAGGAATAAAGCAAAAATTGAATATTCCATGGATGTCA
TGCTGTCGTTTTTGATTAATTTAATACAACTTGCTCAAATATAAGTATTA
TGTGGCACATTAATAATTTCAAATGCCCAGAGTTATATTACTCATAAATA
CATAATATCCATCTAATTTGAATAAATTAAAATGAAATGATAGTATCAAT
GTATAGTTAGTAATTAGAATGATCAAAGTTGTAATTAAACCATGTATTTT
AAGACGAAGAAATTACAATATATGTATTTTACTGACTAATGTACAGCAGC
ATCCGTTATCTATCTAGAAAACAAAAAATAGCAATAAATAATACGTAGAA
TAGCGATAGTTATACATAATTAAACATTTCCTTTACAAACACTTGGTTTC
CATCTTATTCCTCCTGATAATGATACTAATATTTATTGCATCTCTTTTAG
AACTATATGAAGTCATTGATTCAGCAGCAATCTCCTTCCCTATCAAGTTC
CAACTCTAGTAAAATCGATTTATTCGATAATTTGATCATTCTTCAAGACA
AAGTAGAGAGTGGGAAGGACAGTCTTCACGATGAATCCATTACTAAGAGT
CCATCTTGGGAGCAACAACAACAAATGCAAATTCATTCTTATTCAATGAA
CTGCAAGCATAATAATAATAATAGTAAAAACAATCTTGTTCCACCAGCAC
CACTATCGCACACTGGGATTTATCGTACTTTGAGTGATACAAGTGCAGAA
TTTTTAGATAAAAGGAAAAAGTTGGAATCCGAGGATTCTAGCTATGACTC
TGACTATGAGTTATCTGGCATGTCCAAGTCACATGATGATGTATCAAGGA
CTTTTTCAGATACATTGGCCTCGGAGTTTAGTGAATATGTCTCATTGGCT
TRCTCCTCTTCCAAAAGTCAACAGGAAGAGGAAGGAGGATGTGATGAATT
TTCCTTTTCCTCTGATCCTGATTATAATGGAAAGGTTGAATTTGCTTTGA
GATTGGGATATCCAGAAAGTTTATTAGTAAAGGCTCTTAGGAAGTTAGGT
CCCTTAGCTGGACAAGATAAAATTCTTGCAGAATTAATACGTCTACAAAA
TTCAAAGCCTTCCGTTTTACATACAGACCTTGAAAAACCTGTACCACAAG
AAGAAATTACTACTCTTTGTAAAAGTACGTTAGGAGAAGAAAACGAAAAG
GATAGTTTATTACCGATCGTCATTGATGGAAGTAATGTAGCTATGAGCCA
CGGAAACAAGGAAATATTTTCTTGTAGAGGGATTCAGCTATGTGTCAATT
GGTTCAAAGAGAAAGGAATTAAAAATATCACTGTATTTGTTCCAAGATGG
AGGAAAGAATCTTCTAAACCCGAATCCCCTATATCAGGTATGGCATGTGG
TGTAAATCATTTACTTTCATATATCACTTTTTAAATATTTTCCTTGAATG
ATTCAGATCAACATATTCTAAATGAGTTGGAAAAGGAGCGTATTTTAGCA
TATACTCCCTCCCGACAAGTCGGCGGTAGAAGAGTAGTTTGCCATGATGA
CCGATATATTCTTAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCTTATGTACTCCTTTGTGAATGATAGGTAAATATTATATTTAAT
TAATTCATTAAATAGTTTAATATGATAAATTCCTTTTATTTCAGATTTAT
GCCACCTGATGATCCCATGGGGAAGAATGGTCCAACTCTTCATGCATTTT
TAAGGGGTTTGTCAAGAAATTCGGATATACATCACTCTATGCCCTGTCCA
TATGGTAAAAAATGTACTTATGGTAATAAATGCAAGTATTATCATGCTGA
AAGGGGCAATTTGCCTCAAAAGTCAATCACGGACAAACTTAAGGAGCATT
CAACTCTGCGTATCAGTGAAGTTCGTGCAAGAATTCATTCTCGTGACTCT
TCTCCTGGTACGTCTATTTATTTTTTATTATATTCATTTATATTGTTAAA
CTCTTAATTATTAACAAAATCTTATTTTTCTTCTTCTTAGGGGATCCGTT
AACTAGAACATTATCTGTAAATATGCCTCCTCGAATTCATGAGAAACAGC
AACTTTGTCGAACTCAATCAAATATTTCTTCGAGAATCTTTGATAGGAGT
CATACAAATAATCAATTATATGCTTCACAGCAAATGCCACAGCAACAAAA
TCTTTTAACTACTTCTCCTTCTTCGTCAACACATCATAAAGTATATAATA
GTAAGAGTATAAGCTTTGAAAATCTTCCTCCTCTCAATGCATCACCTTCA
TATACAGACTATTCCGTACCACCTCCTCCTCCTCGAACTCCTTGGCAGCA
ACAACAATCCGGGTCATCTTCTCCTCGTCGTCATTCTACGACATCATCAC
CTTATAAATTGGACTCAAATAATGCTCACTTAAAATTAAGCCGTCAACTT
TCACTGAATCCATGCTATGATCCCCGACTCCAGCGATTTCTTTGTCCACC
ACCCACGTCACATCAAAATGTTTCTCGAATCGCTTCTGCACCTGAATTCT
ACATTGGAGGTTCGAACCTAGGTTTTGGTACGAGTCTTACCTATGTTACT
CCTGATACTCCTACCCTCTTACAGAAAACTGTATCTGATAGTGTTTCAGT
TGATTCTTCTGAATGGAATAGTGGCACTTCTGAAAGAATCAATTACGGCC
CAATTGGTTCGTCAAGGAAGAATAGTTGTAACGTTGTGTCTTCTAGACAT
AAGTTATTCGTTCATTTAAAGGAAATTTTCTCTGAGAATCAAGTGCWAMA
AGCCATGTCCGTCCTTCCAGATGAAACAGATGGCCAAAAAATTTGCGAAC
ATATTATTAGCATGAATTCTCAAAAGTGA back to top
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