EMLSAT00000004251, EMLSAT00000004251-700098 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004251
Unique NameEMLSAT00000004251-700098
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s222supercontigLSalAtl2s222:654528..655752 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004251 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004251EMLSAG00000004251-687017Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018454EMLSAE00000018454-727382Lepeophtheirus salmonisexon
EMLSAE00000018455EMLSAE00000018455-727383Lepeophtheirus salmonisexon
EMLSAE00000018456EMLSAE00000018456-727384Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779146auto779146Lepeophtheirus salmonispolypeptide
EMLSAP00000004251EMLSAP00000004251Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004251

>EMLSAP00000004251 ID=EMLSAP00000004251|Name=EMLSAP00000004251|organism=Lepeophtheirus salmonis|type=polypeptide|length=93bp
MSSETLLERRKLLVPNALNSFGPILRNMISKILRISSTLLQTKKWPRFSV
RIASELLVWQNSSHLICLNYVPLKFLSFVRLFCKRLMYFDSYI
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mRNA from alignment at LSalAtl2s222:654528..655752+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004251-700098 ID=EMLSAT00000004251-700098|Name=EMLSAT00000004251|organism=Lepeophtheirus salmonis|type=mRNA|length=1225bp|location=Sequence derived from alignment at LSalAtl2s222:654528..655752+ (Lepeophtheirus salmonis)
TATCATAGGAATATAACCTTCTTTACTATTTCGTTACAAAAATTTATTAC
TACAGAGCACTCCACTTCAATGTATGTTAATGGGCTTACCTTTTATATAA
GCGGAGGAGCTTTTATTTACGTGCGTGAGTTATAAATGTATCACCATAGA
GAGTTGCTTTTTCTTATTTAATAATAAAAACGGGCGGGGGAACCAGGGGG
CGCTGCACCATTTTTAATACTGCCGCCTACTAAAAAAGAATTGGATTCCT
TATATCTTTATTTCATATTCCACTTTAATTCTTTTTCATTGTTCTGTCAG
AGCTCGATCCGTTCACATAGTTTCGAAACTTGGAAATTTTTGCACTTAAC
TTTTTTTGACTCTACATATAAGTAAGTCCTAGATTTTCCTGTACGGGGAG
TCCGTCATTTCTTAGCAGAGTTATTACTTATCTTTGTACGTGTGGGGGAT
GACTTGATAAGTCATTTTTATTTTAAATGACTGAAAATCAATTCCCCCCT
TCTTTCAATTATGGTTTAACTTGTCATAAATATCCTAATTTATTTTTTTC
ATTCATAGATTTAAATCAGTCAATATGCCTAAAGGAGCCGGACTTACGAA
ATCAATGAAGCTCTCCAATGAGCTCGGAGACATTGTTGGAAAGAAGGAAG
CTTCTCGTGCCGAATGCATTAAACAGCTTTGGGCCTATATTAAGAAACAT
GATCTCCAAGATCCTGAGAATAAGCAGTACTTTACTCCAGACAAAAAAAT
GGCCAAGGTAATATAATTAATTACATGCATTCTGMCGCGCCTTCGTTTAT
GGCCCTCTCCCGCCAAAACATTTGAATTTGAAAAGGGGGGGGGGAGAAAG
TAACTTAGCTCCTCCCATTCATTCCTCTCTTCTATGTTACTTAATTCTCT
CTCTCTCTCTCTCTCCTACAAAATTTACTTACAATTCAGTATTGATGCTA
ATGTTTATGTTTTTTTACAGGTTTTCGGTGAGGATCGCATCCGAGCTTTT
GGTATGGCAAAATTCCTCTCACCTCATTTGTCTTAATTATGTACCTCTAA
AATTTCTCTCATTTGTTCGATTATTTTGCAAAAGATTAATGTACTTCGAT
AGTTATATATAAATTTATAAACGTGTCAAAAGACAAAAAAAGAAAAAAAA
AATATCAAGAAATTTCCTTCAATATAGATTTTTTTATTAATGTAGAAGTT
ACTTTATTTTTTAATTTATTGTTTG
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