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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s222 | supercontig | LSalAtl2s222:663018..669012 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004252 >EMLSAP00000004252 ID=EMLSAP00000004252|Name=EMLSAP00000004252|organism=Lepeophtheirus salmonis|type=polypeptide|length=1698bp
MPFINEYGTSQSNTRGSSGFDRFSSTRKSSVFERPFKTADSSVAALSSKY
LSLHNNSNNSDSYRSRNYGSSSNKSFNGSHVNGNTTSSNPHSNLSSDFGS
KTKNFTTASNYSRTDGGTSYKPSSRSSSRNIFSNGEESENIRYSSTNNKN
SNVTSGRSYNGSGSNGSITGKSYENDLSDRIAKTLAKHGVQDRIPTPNSF
TDSPYNSLGRNGTWRKRFESVEPLEEPTIKKSVISRATSPQPDKEKQFRT
RIARTTDEALVEVRRSRKSRIYDIAIQTDVNSEFGDLKTILNSIPMKKTP
PTTKKPITRTSSGFDYFARVKKSLEEAPNAFARVMESKTVDEESNEPEDH
YYKIGKAPMMQLLPGSRSTSATPSVNRNSFYETQSVQASNEEMNEEDEEE
EEESEYEEYSDEDGEEAYEDKADKALENITPSRKTPQSIKSPILSPGTKR
RNSKGPYIGGTIDIDILLAKETDPTNLIESEDEDNKPFGQVMQMSLDFST
ARKSTAIESDSPWWMDIQKDDFERKELKDASEYNEKEITSSIEQKEVEEK
TEEAEYDEEDEEEGDWEYYTEGDGNEEEERSESQDLGEIEDEERLNWIIQ
GLYQIIPALPGKRQDELYSRSESSSDDDYEEESTRNYDTEKGYYEWLQES
AELHTEIQLEGEDSLQEEDEDYENSNQGNNNKATKLVQRIKNADEIELKS
LLFGLKSIFQSDKDIVFQFVSTGGLLTLIELGDKQSTSESSMTQNLILRA
LGQIMLYVDGMNGVMENKQAVQFLYKLTAXLNPLVCKTGIKLLLVFVEYL
ETNCIILIQAISEVDKANGTHPWTNIIDILKNETTVPDLFKYAITLINRT
LYGIPTQDLFYDQIDFMECAGIEDVFERMSNKSSRDHGIMEQIQLFNVAI
KQEDGEPVTEDEISFIEEEASEMGLRSVLRIKSNIPIDKSVIVRKSLRYK
SRKIAEDPLDDTGDMGIISFKDAENILKKHGLPTTRSAEALNSLELDGFL
DKTRSIFAAKITKGEIDESTKDSEEECKSENEDDDDEAVGEKQWEKIKAE
FKRPLVICDLDFTDLQDDHSPSAEVKPLPGSNIPXPPPPPPLENGSAVPP
PPPLPPTNNTGTMIPAPPPPPAAPVEKETEGEKKPTVQSQKTKKTVKLFW
REIRSNDSSSQSSNSNGKKLSIWDERVGTDVIDKEMIEYLFEYRGKDVTT
KDNKPGLINTSREIVVLDAKRSNSINIGMTKLPPPRIIRSAVIKMDSSIM
NREGVDKLLTMLPTQDEAERIQEAREAQPDIPLGTAEQFLLTLSSISGLE
ARLRLWSFKMEFEVIEKELCDPIMDLKTGIDSLSKNSTFKTILHILLCIG
NFLNGTSCKGFYLDYLAKVPEVKDTVHKHSLLYHTTFWLLEIYPTCSDLY
SEMGPLIRASRTDFSESERTLRRMEEECKHAWDYLKVIYKSTVLEAQESE
QFAKFNDFLSDAAERIIVMTMVHKKVIKKFHNFLSWLGVPGFLWSDYPVH
ATCKTLSEFALEFRTTRDRVIQTIQKKKAAREKKLVQKKLQKSIENGESV
NLPPSSHHRPRPPRDETRQGALEKILGKDIDVTDNGTLRRRKKHHHHRSR
KVPEGGEVSVEVPVRKEKKSRRHRPSLMMGEGTLPITEDMIMSFNPNNDM
ERGLLETLMMAPDTSSLKRNKERRRSKAERKTSMDITRSRXRELSTDI back to topmRNA from alignment at LSalAtl2s222:663018..669012+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004252-700099 ID=EMLSAT00000004252-700099|Name=EMLSAT00000004252|organism=Lepeophtheirus salmonis|type=mRNA|length=5995bp|location=Sequence derived from alignment at LSalAtl2s222:663018..669012+ (Lepeophtheirus salmonis)
CTTGACTCCTGAGAGGGAAGGAAGGAAAAGCTGGCAAAGTTGTAAGAAGC
AGTTGGATTTTGTCTGTCTTGTGTGAATCATTTCTTTCAGAGTTAAGTTA
ACTAATAATACTCACCAGTTACATTTGTAAAATTAGAGTAGTGTGAAAAA
AAAGGGATGAAACACTAGATTAAATANNNNNNNNGCCTATAGATATACCT
GAGACGCTCTTCCGATCCTTACAAATCCAGGAACTCCATTTTCAACACCG
TCAATCACTAATATAGATTATACATTCTCCTTTGTCCTCGTGTTTTCTAT
TGTGTTACATTCATTGGTTATTCCTCACACACTTCATATGCTTAAAATCC
ACTCAGACAACATGAAATATTCAGTATTACTCTCTGACACGTCCCCAGAC
CCCATCTTCTTCATAAATGTCACTGTTCCTTTTAATCTATTAAAATAATT
ACTGTCATACTACTTGAATTCAAACTTATATACACTTATCCATAATTTAT
GAATAAACATTTATATACATATATCGTAGTTAAATACAAAAGAAAATATC
TAAGCAAGAATGCCTTTTATCAATGAGTATGGAACTAGTCAGTCTAATAC
GAGGGGCTCCTCTGGTTTTGATCGATTTAGTTCTACACGGAAAAGCTCTG
TGTTTGAGCGACCTTTCAAAACTGCGGACTCCTCTGTTGCGGCCCTCTCT
TCCAAGTATCTCTCTTTACACAATAATAGTAATAATAGTGATTCTTATCG
ATCTAGAAATTATGGATCCTCTTCCAATAAAAGCTTCAATGGCAGTCATG
TCAATGGTAATACAACTTCTTCCAACCCCCACTCTAATTTATCATCAGAC
TTTGGCTCTAAGACAAAAAACTTTACGACCGCTTCTAATTATTCAAGGTA
AGAACAAGGTTCAATCGAACTTGTGAAAAATATAGTTACATACCCTATTT
CATTCCAGGACAGATGGCGGAACGTCATATAAACCCAGTTCCAGGAGTAG
TAGTCGAAATATTTTTAGTAATGGAGAAGAATCTGAGAATATACGCTATT
CATCAACTAATAATAAGAACAGCAATGTAACAAGTGGTCGGAGCTATAAT
GGCTCTGGAAGTAATGGTTCCATAACTGGTAAAAGTTATGAGAACGACCT
TTCAGACCGTATAGCGAAAACACTCGCTAAACATGGAGTTCAAGATCGCA
TTCCAACCCCAAATTCATTTACTGACTCTCCATACAACTCCTTGGGCCGT
AATGGAACATGGAGAAAACGATTTGAGTCTGTTGAACCCTTAGAAGAGCC
AACAATAAAAAAATCCGTGATTTCTCGAGCAACATCTCCTCAACCTGATA
AGGAGAAACAATTTCGTACACGAATTGCTAGAACTACAGATGAAGCCTTA
GTAGAAGTACGGAGATCGCGTAAATCTCGGATTTATGACATTGCCATTCA
AACGGACGTCAATTCAGAATTTGGTGACCTTAAAACAATATTAAACTCAA
TCCCTATGAAAAAGACTCCCCCAACAACAAAAAAACCAATTACAAGGACT
TCATCAGGATTTGATTACTTTGCAAGAGTAAAGAAATCATTAGAAGAGGC
TCCCAATGCATTTGCACGTGTTATGGAGTCAAAAACAGTGGATGAAGAGA
GTAATGAACCTGAAGATCATTACTATAAAATTGGAAAGGCACCAATGATG
CAATTATTACCAGGATCTCGTTCAACGTCTGCGACACCCTCAGTGAATCG
CAATAGTTTTTATGAAACTCAATCAGTACAAGCCTCCAACGAAGAAATGA
ACGAAGAAGACGAGGAAGAAGAAGAAGAATCAGAGTATGAAGAATACTCT
GACGAGGACGGAGAGGAGGCCTACGAGGATAAAGCAGATAAGGCATTAGA
AAATATAACACCGAGTAGGAAGACACCACAGAGCATCAAATCTCCAATTT
TATCACCCGGTACAAAGCGAAGGAATAGTAAAGGTCCCTATATAGGTGGT
ACAATTGATATTGACATCCTGTTAGCGAAAGAGACTGACCCAACAAATTT
AATTGAAAGTGAGGATGAAGATAATAAACCCTTTGGCCAGGTGATGCAAA
TGTCCTTGGATTTTTCCACTGCCAGAAAGTCAACTGCCATTGAATCAGAT
TCCCCATGGTGGATGGACATACAAAAAGATGACTTTGAGCGTAAAGAACT
CAAGGACGCCTCTGAATACAATGAAAAAGAAATTACGTCCTCCATTGAAC
AAAAAGAAGTTGAAGAAAAAACGGAGGAGGCTGAATATGACGAGGAGGAC
GAAGAAGAAGGAGATTGGGAATATTACACAGAAGGAGATGGAAATGAAGA
GGAAGAACGTTCCGAGAGTCAAGATCTTGGAGAAATAGAGGATGAGGAAC
GTTTGAATTGGATCATTCAAGGATTATATCAAATCATACCCGCTCTACCA
GGTAAACGTCAAGATGAACTTTATTCCAGGTCAGAGTCAAGTTCAGATGA
CGATTATGAAGAAGAAAGTACTCGCAACTATGATACAGAAAAAGGATATT
ATGAATGGCTTCAAGAATCTGCAGAGCTTCACACGGAAATTCAATTAGAA
GGTGAGGATTCACTTCAAGAAGAAGATGAAGATTATGAAAATTCCAATCA
AGGAAATAATAACAAGGCAACTAAATTAGTGCAAAGAATTAAAAATGCGG
ACGAGATAGAATTAAAAAGCCTTCTTTTTGGCTTGAAATCCATATTTCAA
TCTGATAAGGATATTGTTTTCCAGTTTGTTAGTACTGGAGGTTTGTTGAC
ATTGATTGAATTGGGTGATAAACAATCTACTAGTGAATCATCAATGACTC
AAAATCTTATTCTGCGTGCTCTAGGTCAAATCATGCTCTATGTTGATGGT
ATGAATGGAGTTATGGAAAATAAACAAGCTGTTCAGTTTTTATATAAACT
AACGGCTAYTCTAAATCCATTGGTATGTAAAACTGGGATCAAGCTTTTAT
TGGTTTTCGTTGAATACCTTGAAACAAATTGCATTATTCTAATACAAGCA
ATAAGTGAAGTGGATAAAGCAAACGGTACACATCCTTGGACAAACATCAT
AGATATTTTGAAAAACGAAACAACAGTTCCCGATTTATTTAAATATGCAA
TTACATTAATCAATAGAACACTTTATGGAATACCCACTCAAGATCTTTTC
TACGATCAAATTGACTTCATGGAATGTGCTGGCATTGAAGATGTATTTGA
AAGAATGAGTAATAAATCAAGTCGAGATCATGGGATAATGGAACAAATCC
AACTTTTCAATGTTGCAATTAAACAGGAGGATGGGGAACCTGTGACAGAG
GACGAGATTAGTTTCATTGAAGAAGAAGCCTCAGAAATGGGACTCCGATC
CGTTCTGAGAATCAAATCTAATATTCCAATAGACAAATCTGTGATTGTAA
GAAAGTCTTTGAGGTATAAGAGTAGGAAAATAGCTGAAGATCCTTTGGAC
GATACAGGTGATATGGGGATCATATCATTTAAGGATGCTGAAAACATTCT
CAAAAAACATGGACTACCCACCACAAGATCTGCAGAGGCATTAAACTCAT
TGGAACTAGATGGATTTTTAGACAAAACAAGATCGATTTTTGCCGCTAAA
ATTACTAAAGGTGAAATTGATGAGTCAACTAAAGATTCGGAGGAAGAGTG
TAAATCCGAGAATGAGGACGATGATGATGAGGCTGTAGGAGAAAAGCAAT
GGGAAAAAATCAAAGCCGAGTTTAAGAGGCCTTTAGTTATATGCGATTTA
GACTTTACAGATTTGCAAGACGATCATTCACCATCGGCAGAAGTTAAGCC
CTTGCCTGGCTCCAATATTCCAARCCCGCCTCCTCCACCTCCACTTGAAA
ATGGATCAGCTGTTCCACCGCCTCCACCACTTCCTCCTACAAACAATACT
GGAACTATGATTCCTGCACCTCCCCCACCCCCAGCTGCACCTGTTGAAAA
GGAGACTGAGGGTGAGAAAAAACCCACCGTTCAAAGTCAGAAAACAAAGA
AAACCGTTAAATTATTTTGGAGGGAGATTCGAAGTAATGACAGCTCCTCT
CAAAGTAGTAATAGCAATGGGAAGAAGTTATCAATTTGGGATGAAAGAGT
AGGTACGGATGTCATAGATAAGGAAATGATCGAATACTTGTTTGAATATC
GAGGAAAAGACGTAACAACTAAGGACAATAAACCAGGCTTGATAAATACT
TCCAGAGAAATTGTTGTTCTGGATGCCAAGAGATCAAATTCTATAAACAT
TGGTATGACAAAGTTACCACCACCAAGAATTATTCGCTCAGCTGTGATAA
AAATGGATTCATCCATTATGAATAGAGAGGGAGTCGATAAATTATTAACC
ATGCTTCCAACTCAAGATGAGGCAGAGAGAATACAAGAGGCGCGAGAAGC
TCAGCCAGATATTCCATTAGGTACAGCTGAACAGTTCCTCCTTACTCTCT
CTTCTATCTCTGGATTAGAAGCTCGGTTACGACTCTGGTCTTTCAAGATG
GAATTTGAAGTTATTGAGAAGGAATTATGTGATCCAATCATGGACTTGAA
GACAGGGATTGATTCCCTGAGTAAAAATTCTACCTTCAAAACGATTCTTC
ACATTTTGTTATGCATTGGGAATTTTCTGAATGGAACATCCTGTAAGGGA
TTTTATCTGGATTATCTAGCCAAAGTTCCAGAAGTGAAAGACACAGTTCA
CAAACACTCCCTCCTATATCACACAACTTTTTGGCTTCTAGAAATATACC
CTACTTGTAGTGATCTCTATTCGGAAATGGGACCCCTTATTCGTGCCTCT
CGTACAGATTTCTCAGAATCTGAGCGAACTCTACGTCGAATGGAAGAGGA
GTGCAAACACGCATGGGATTATCTTAAAGTTATTTACAAATCAACTGTTC
TCGAGGCTCAAGAGTCTGAGCAATTTGCAAAATTTAATGACTTTCTCTCA
GATGCTGCAGAGAGAATCATAGTTATGACAATGGTTCATAAAAAAGTGAT
TAAAAAGTTCCATAATTTTCTTTCTTGGCTGGGAGTCCCTGGATTCCTTT
GGTCAGATTATCCAGTTCATGCAACTTGTAAAACACTCTCTGAGTTTGCT
TTAGAATTCCGAACAACCCGAGATCGCGTCATACAAACCATTCAAAAAAA
GAAAGCTGCAAGAGAGAAGAAATTAGTTCAAAAGAAATTACAAAAGAGTA
TTGAGAATGGAGAGTCTGTCAATCTTCCKCCCTCGTCTCATCACCGTCCA
CGTCCTCCTAGAGATGAAACACGACAAGGGGCTCTTGAGAAAATCCTAGG
AAAGGATATAGATGTAACAGATAATGGGACATTGCGAAGAAGAAAGAAAC
ATCATCATCATCGTTCTCGAAAGGTTCCAGAAGGAGGAGAAGTGAGCGTA
GAAGTTCCAGTCCGAAAGGAGAAAAAGTCTCGTCGACATCGACCATCATT
AATGATGGGAGAAGGAACTTTGCCTATTACAGAGGATATGATTATGAGTT
TTAATCCAAATAATGATATGGAGAGAGGACTATTAGAAACCTTAATGATG
GCTCCGGACACATCTTCCCTTAAACGAAATAAGGAGAGACGGAGATCAAA
AGCAGAGCGGAAGACGAGTATGGACATAACGCGCTCCCGAKCTCGGGAAT
TATCCACTGATATTTAATAGACATTAGACATATGTGATAAACTATTATCT
TATCCTTAAATATAGATTTTTTATATTTTAATTATATATTTTATATCAAA
TAATTCTAATTATTAAGGAGTAGTATTTTATGTTCAATTTGCTGTTTTTT
TATTTAACTTATTCTACCTGATTTTTGTGTGTACTCTTTTGTACATAAGT
AATTCCAAATAATTTTGTAATTATTATTTCAAATTGCATACAAACAACAT
ATTATAACGATATTTATTGATTAAATAATTATTTAAAATCCTGTG back to top
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