EMLSAT00000004275, EMLSAT00000004275-700122 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004275
Unique NameEMLSAT00000004275-700122
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s224supercontigLSalAtl2s224:305474..306610 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004275 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004275EMLSAG00000004275-687041Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018574EMLSAE00000018574-727502Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776145auto776145Lepeophtheirus salmonispolypeptide
EMLSAP00000004275EMLSAP00000004275Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004275

>EMLSAP00000004275 ID=EMLSAP00000004275|Name=EMLSAP00000004275|organism=Lepeophtheirus salmonis|type=polypeptide|length=378bp
MLGVFQPLTAFLKLDSVWIDNNVFRLXYKATVMXFVXXXLMXTSRXFFGD
PIDCIVDNVPGDIMDTYCWIHSTFTIPNKISGEVGKDMPFPGISPIADLE
PGTEVKFHKYYQWVCFFLFFEAALFYVPRHLWKSSEGGKISMLVGELMEP
LLEEEKRSDQISLIVKYFTTHRGTHTLYALRYFFCEVLNFVNVILQIYFI
DYFLNYEFTNYGTRVLEYSEMDSSERDDPMALVFPKVTKCTFNKYGPSGT
IEVKDGLCVLPLNIINEKIFIFLWFWLIVIAAISGLFLIYRLFVLLGFQI
RVALITYRGGRSTKRDHVASILNAPSFSYMEKIGDWLVLYLLCKNLDVLT
VNELIKHLRKSTEMSDEKSETMKLNSSV
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mRNA from alignment at LSalAtl2s224:305474..306610+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004275-700122 ID=EMLSAT00000004275-700122|Name=EMLSAT00000004275|organism=Lepeophtheirus salmonis|type=mRNA|length=1137bp|location=Sequence derived from alignment at LSalAtl2s224:305474..306610+ (Lepeophtheirus salmonis)
ATGTTGGGCGTATTTCAACCCTTGACCGCCTTCCTGAAGTTGGATAGCGT
TTGGATCGACAACAATGTGTTTCGGCTGSATTATAAGGCGACCGTGATGG
KGTTTGTGGSGGSGKCCCTGATGGKGACCTCTCGTCMGTTCTTTGGAGAT
CCCATCGACTGCATCGTGGACAATGTTCCAGGAGACATAATGGACACCTA
CTGCTGGATCCACTCCACTTTCACCATTCCCAACAAGATTTCCGGAGAGG
TGGGCAAAGACATGCCTTTCCCTGGCATCTCTCCCATTGCGGACCTGGAG
CCTGGCACGGAAGTCAAGTTCCACAAATACTACCAATGGGTCTGCTTCTT
CCTCTTCTTTGAAGCCGCTTTGTTCTATGTGCCAAGGCACCTCTGGAAAA
GCTCCGAAGGCGGAAAGATCTCCATGTTGGTTGGGGAGTTGATGGAACCT
CTGTTGGAGGAGGAAAAGAGGTCTGATCAGATCTCGCTCATTGTCAAATA
CTTCACGACCCACCGTGGAACACACACGCTCTATGCTCTCAGGTACTTCT
TCTGTGAAGTACTCAACTTTGTTAACGTCATTCTTCAAATCTATTTCATC
GATTACTTTCTCAACTATGAATTCACCAACTACGGAACACGTGTTTTGGA
ATATTCGGAAATGGACTCCTCAGAAAGAGATGATCCCATGGCTTTGGTCT
TCCCTAAGGTCACCAAGTGTACATTCAACAAATATGGTCCCTCCGGTACA
ATTGAAGTCAAGGATGGTCTCTGTGTTCTCCCACTTAATATCATCAACGA
AAAAATATTCATTTTCCTTTGGTTTTGGTTAATTGTGATTGCTGCGATCT
CTGGTCTCTTCCTTATCTACCGGCTCTTTGTTCTATTGGGATTTCAAATT
CGTGTTGCGCTCATCACCTACCGTGGAGGAAGATCAACCAAGAGGGATCA
TGTTGCCTCCATTCTTAATGCTCCTTCCTTTTCCTATATGGAAAAGATTG
GAGATTGGTTGGTTTTATATCTTCTCTGCAAGAATCTCGATGTTCTTACT
GTTAACGAGCTCATCAAACATCTCCGTAAATCAACTGAGATGAGCGATGA
AAAGAGCGAAACTATGAAGCTTAACTCTTCTGTCTAA
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