EMLSAT00000004282, EMLSAT00000004282-700129 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000004282
Unique Name	EMLSAT00000004282-700129
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s224	supercontig	LSalAtl2s224:424999..434579 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000004282 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000004282	EMLSAG00000004282-687048	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000018605	EMLSAE00000018605-727533	Lepeophtheirus salmonis	exon
EMLSAE00000018606	EMLSAE00000018606-727534	Lepeophtheirus salmonis	exon
EMLSAE00000018607	EMLSAE00000018607-727535	Lepeophtheirus salmonis	exon
EMLSAE00000018608	EMLSAE00000018608-727536	Lepeophtheirus salmonis	exon
EMLSAE00000018609	EMLSAE00000018609-727537	Lepeophtheirus salmonis	exon
EMLSAE00000018610	EMLSAE00000018610-727538	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto777546	auto777546	Lepeophtheirus salmonis	polypeptide
EMLSAP00000004282	EMLSAP00000004282	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s224:424999..434579-

protein sequence of EMLSAP00000004282

>EMLSAP00000004282 ID=EMLSAP00000004282|Name=EMLSAP00000004282|organism=Lepeophtheirus salmonis|type=polypeptide|length=184bp
MANLQLPLNQDHEGFYCPASDESENVFCCGSSFRKYCCTKKDKVLQSEIQ
DLTILIGIIVGASAAIMIITLVSCFCCSCCILYKKRNSSSNGASRTGTPQ
LNSGHYHRMMHEETAAALSHHHRHYQRNGGMSHSHTLPHNLSHHSKNRQS
EVNTQNHEQGNVSFNARATQGYPSNGSQCYQSCQ

mRNA from alignment at LSalAtl2s224:424999..434579-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000004282-700129 ID=EMLSAT00000004282-700129|Name=EMLSAT00000004282|organism=Lepeophtheirus salmonis|type=mRNA|length=9581bp|location=Sequence derived from alignment at LSalAtl2s224:424999..434579- (Lepeophtheirus salmonis)
ATGGCAAATTTGCAACTTCCGTTGAATCAAGATCACGAAGGTAAATATAT
ATATATATCCATGTATCTTCCTTTTTTCTTTTTCTTTTTTGCGTGGGGAG
GGGGGGGGGATAGTCAAATCTTTCTTACATAATTTTTTCTACTCCAGTTT
GAACCGATATTTCGGTCGAGGCTACTATCTCAAGTGTAGACCAAAATTTC
ATCGTTTATAAATCGATTACCAACTTTCTTGGTCTAATCTCTTTGTCTCC
CTAAAAAAAATTCCCCCAATCCTAGCTATCCCTTTAATGACAAGATTGTA
TGTAATAAAGATATCAAAATGATATAATCTTATACATACATCTTGAACAA
TTATATAGTCAGAGACAACTTCGGAATAGATAATTGTCGATCAAGACTTG
ACTAGGGACGTAGGAGCTCCAACACATTCGATCCAAACAAATGATCCATT
CACATTGTCCATTGAATCTCAATCATTAATGGATTTACTCCTTCTATTCT
TTAAAACTTTCTGTCTCTTTCTAACTTATTTATTGGGCGGTTGTCATGAT
TTTTGTTACAAAGGTTCTATTAGCTGTTTGAGACAACTTTTAGAGCCTTT
TTGAAATGAATCAATTATAAATCAATAAACACTTACTCATTCCAATTCAT
GACAAATAATTGGAGTGACGTGATTGGAGATCATAATTTCATTGTGTTGC
AGTATGAGTCATCATCAAATGTATGTAATTGTTGCTTTTTATTTGACAAA
ATATCTGTTCGGCAATGCGGTCATTTGAAAAAGTGTCCGTTTGGCAATAC
GGTTTTCGGCAAAATATCCACACACCCATTGTGACGATGATTACAATTTG
GAAAGGTCGTTGATGTCATCAAACTCTCCTAAAAAATTGGTCTAGGCCGA
ATTTTAAAAGAGGCCCATCAGGATTTAGTCTTTTTTGTGTGATCAATCTA
AACCGAATTTTTCTATGAGATCAATTGAGAACAAACTTTTTAACAAAATG
AAGTAGTTTGATCAAACAAAGATTAGAATGACAGAGTCTTAATCACTGTT
TTGTTATTGGGTGCCTGGTTGTGGTGATTACGCCTTTAAATGGCTAAAGA
CCGATCTAGGATTTTCCAAACCCGAGCCCAACACTAATTTTGGCATCTTT
TTTCACTTTAAACATACATAATTTTTTTTATAGTGGTTCTGGGAAGTGAA
TACTGCTCTGGCTATAAGGATCCCATAAGCAATGAGTGGCATACAGGGTT
CTATTGTCCAGCTTCAGATGAAAGTGAGAACGTTTTTTGTTGTGGATCAT
CATTTCGGAAATATTGCTGCACGAAGAAGGACAAGGTTCTCCAGTCGGAA
ATCCAAGAGTATTTAGAGTAAATCCGATTGCTCTAAGAACAGATTTCTAA
TATATCTTCTTATTTATATAGCTTGACAATTTTGATCGGAATCATTGTTG
GAGCCTCTGCAGCTATTATGATCATCACACTAGTCTCCTGCTTCTGTTGC
TCATGCTGTATCCTTTACAAAAAACGGAACTCATCCTCCAATGGTAAGTG
CTTTAATTAATTAAAGAATAATCTATAGGGGGAATATGTACATCTAGGGG
GGGGGGGGGCGAAATAATCCAATTTTATATTTATAGAAACCCTTTTTCAA
TTATATTAAAGGAAATAGTGAGCTATTGCCCTTAATATTGGATGTCAAAT
GGGACTAGCAAGTAAAAGGGTCCTGTGTAACTTTGTTGCGAACATTTTNN
NNNNNNNNNNNNNNNNNNNNNNCTGAAGAGATTTTACAGCAGAACATGTT
ACTCATATTTCAACGTTTTTAAAATATAGGTTCAAACTTTATATTAAGTC
TTTACTGTTACAACATTCATTTCTTTCTATCGATGAAGTCTTATACATTT
CCTCAGATACCAACTAAGATCATGACTATGAGTAAGGTCCCACTATTCCT
TTCAAAATAGACGGAGCATGATCCAAGATCTGTGTCTCCTTTGTCCATAT
AAGCACTATTCCATCTTTATTTCCATACTATTTTTCTTCATCTTCTGATT
TATAGCCGAGATACAACAGTGAAGACCAAATTTAATACTGAAACCCATAA
TTAAGAATGCCATTTTCGTAAAGAAAAACTAAGTTCAGGGATTGGAAAAG
GAAAAACGGTTGACACGCGTGCTCTTTCCTCTTTTTTGATCATTTAATAA
CTCGTTGTCACTTTGAAGTAAGCACTTTCGCCTATCTTTGGTGTAAATGA
TCTACAAAAAAAAATATGTATATGAAATTAATTATAATAACTTACCTATA
GTCATGTTACGTTAAATGCTGAAGTTTATCTTCTTCTTTATAACATTAAT
CCATTTCCTCCCTCCCCCCCCCAAAAAAAATCATATAACAGGCAGCTGAT
AGTAACAAGAGTCTTAATTCATAAATACAATAAGTCTCCTTCCTGCCTTC
TTCTCGCCCTCGTTTTTTCTTTACAACAACGGTATCTAACCCATAATATA
AAACCAAAAAAAGGTGCTGAATGTCACGCGGCCAAATCTCCAAAAATATC
AATTTTCGCGTCAAAATTACCGGTTACGAAATAAAAAAAACTAAAACACT
ACTATATATCAAAAATATATTCCTATAATATGAATTAAAAATATATTATT
ACATCGTTACACAATCTTACTCTATATAATAACTAACTATTACCGAGTGG
TCCATTATAATCCAAACACTTTAAATTTTAAACTTCAAAAAAGATATATT
TTATTAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGGCCACATTGAAGACACAGCANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGAGCTTCTTTTTTTCTTTTT
TTGAACTCACCCAGGTCCAGTTTGGCCATTTTGACAAAGCCCTTAACATT
CTCTAACGTTTTGGACTTGTTGAAGGCCTAGACGGTTTTCTTGGAGCTAG
AAAGAGAGAGCTAAGGTTTGTTTTGTTTTGTCACTTATTTTTTTTTTTTT
GGTTAATATATCGAAATATGAATTAATTTCAATCACTGAATCGACAACGC
ACTGGGAGAAGTTATTCTCTTGAATTCAATGTGCATTCGCGCCTAGGCGA
TTCCTAGATAAAGAAATATGCTTTGTATATGGATTTCAACAAAATATTCC
TAGGTTAGATTGAGTAAATGCAATACTATATATAATGTTTACTTAAACTT
AATCAGTGCAACTCCATCTAACCAATTAAAGGAACATTAAAATAAAAAAA
ATCACTGAATCTTCAATAATTATTGAATTAGTAAATGTTTAGACTTCACT
GGACCACCTACTACAATGGAAAGAAACATATATTTTCATCTAATTATACT
ACATTTCTCGTTCGTAAACAATAGAAAAAAATTGATAAAATATAGGCATT
TCCCTGCCTGTTGATTTAATACAAATATCACTATTTTTATTTATAATGAA
GTTCTATTAAATAAAATTATTTAGTATTTTCTATATTTTTAAAGCCATTT
GATGAAGTTTCATATAGATTTATTGGGAAGTGTGTCCATTTAAAAAATCT
TCATTCATGGACCATACACACTTTTAATTCCTTTTTTTTTTTTTTTGACA
AAATTAAGAGTATATTTTCTATCATACTTTAATAAATTAGTTATGAAAGA
GAGAATTGAATTAAAACAATCGTGTTTTTAAGGAATGTCATAAGGAACTA
TAAGAACTTTTATTAGTAATTAATATTCGGATAATAGAAAAGAAATATAT
ATATAGAGAAAATATTCAATTAATTCTTTAAACATTCATTACACGATTTA
TTTCACAAATATGTTAAATTAAAGAGGGAATTGAATTAAAACAATAAAAC
GCCCTTAGCGCAGTGCAACTCTTGCAATTCATGGTTTATGGTGGCTGAAA
TGTTAAGTTCTAGGATGATAATTCCTGCTATTACTCATTTAATGGATACC
TAAAACTTTAAAAAGGCTAAATGTTAGGGTTGTATTGGTCCTTAATATGG
GGAATAAGGGGACCTGCTGCTAATATTGATCCTTGAAAAACGTTCCAAAT
TTTAGAATGCCCTCTAAAAGGTATCATTTTTGCATAGTATTAAAGTTTAC
CAATTGGTAAATTAATTTGTGAAATCGACGTAGCTCATGGACAGCTCGCT
CGGAAGAAATTATTCTCTTGAACTCAATGTGCGTAGGTTCGCACCTTGAT
CATTCCTAGAGAAAGAAATATACTTTATGTATATAGACTTCACACAATAA
TCCTAGGTTAGATGGAGTAATTGTAATGTTTACTTATACTTATTCAGTGC
AACTCTATCAAAACCAATTAAGGAAATATTAAAAAAAAAATATTTTAAGC
AAGAAAATAGTTTCACATCATTCTTCATTTAGGACTGAATAAATTATATA
TAATCTTAATTGTTAATACTTGTAAGATCAACCTTAGACCATTGCAATTA
CTCGACACTTCAAATAGGCCTTGCGCTTGATGGAGCGTTTTTACTGACGA
TATTATAAATTGCCTCATAATTGAAAGAGACGTAATTGTTTGGGCAGAAA
GTTGATATTTTTACTACATAAAATGGGCAAATTTTCCAATAAATCTGGAT
GAAATTCAGTGCTTTAAGATTAAAAAAAGACCTATAATCTGCATTGAATG
TTATTTGATACTCATGATAAACATGGACATTTGAATATAATCAAAGTAAT
ATTCCCGAAGAAATGCCTCAATTTCTATAATTTTGTTTTAGGGATTAGGG
ATGATAAAAATGGGATTATAATAGCAAAATATCTTATTATATACATTTAA
AAAACCTTATAGAATACTATATTTTTAATAAACATCATGGTCTAATATAT
AATAAAAGTAGGCATTGAGGTGATAAATGTTTGATATACATATTATAAGG
TGCATGCCCTTTTATTTTTTAACTGATAATTTTGTAAAAAAAAAAAGTCT
TAATTGGGGGGTAGGGGGGGGGGCTCAATTATCCCACCGGATAAATAATA
AAACTAGGCGATATAGGGATATATTTGGGGTACATTTGAATAAGTTTGCC
CGCACGGCGTACTTTCTCTTTCTATCTCGAAATCAAAGACAGTACCAGCA
GTTAGTAACAATTCAATTATAGCAAGCTTTTAATTATAAGGAAATAACTT
TGCAAAGCGAAGAATAGATTATAGGATTAGGAGAAGAGGGATCTAGACTT
ACTCGAGATATTCGGACAATTAGCACTTTGGAGGAAGATGAAAGCAGAGG
AAAGGTCTCATTGTGTAGAGGAAGTTTTTAGTTTGCCTCTTATAAAGTAT
TCAAGGCAGAGGGGCTTTGAGTGGATCCGTGGACTCAAGGATAAGGACAT
AGGAGGCCATATCTAATTGAGTAAAGCACTAAAACTTTTTATTTTATCTA
CCATGAACCATTACTGTATAATTACAGGATAAACGTAACAGGTATCATGG
AGAGAAACTCTATTTTTATCAAATCCATTAACTCGTGATACAGAAAATTA
CTACACACATACATAAATACGGTGCAAACTCCCATGATTGTCTAATCCTA
TGTGGAAAATTATTCGAGCAATTGTGATTCATTGTGTCGAGATCCCTCTC
CTCCTAATCCAATAATAGATTATGTGCTTTGCGAAGGATCACTTCGTTGC
ACTTTGCGAAGTTATTTCCTTATTATTAAAAGGTTGAAATAATTGACTTT
CAACTATCCACTGTCTCAATTTCGAGATAGGTAGGGAAAGTATGACGTGC
GGGCAAACTTATAAAATGTACCCTAAATTTTTAATAGACAATAACGTTTT
GGTTCCATTTTGACATATTATAATTCCCTATTTTCTTTAATAGTAATAAA
AAAACGGATTTTAAAACTTGGTTGGTTAGGCCCCTATAATAGCCGACATC
AACAAACTTGACGTCACATGAAAACGGTCTATTGATATAACTTATAAAAG
TGCTATTACCAACTGTTGTTTTTCTTTCTTTCCTTGAACTCAACTCTGTC
TTAAAATTCTTTGCAACCCAACTAATACTTTATTTCCATTCTCACCTAGG
CTCCATGTATCGTTTTCACAATGCAAGTGAGCACAGTGGTGTAACCAACA
TGTACAGTCTCTCTGGAGGAGCATCTAGAACTGGAACTCCTCAATTGAAT
AGTGGGCATTATCATCGAATGATGCACGAAGAAACAGCTGCTGCCCTCTC
TCATCACCATCGTCATTATCAAAGGAATGGAGGAATGAGCCATTCTCATA
CCTTACCTCATAATCTATCGCATCACAGCAAAAGTGAGAGTCCATTATTA
TTTTCTTTTAACAAGAAATCATTTCCTTTTTCCCTTAATAAAAGATCGAC
AAAGTGAAGTAAATACTCAAAATCATGAACAAGTACGAGCATATGGGACT
TTGGGTCGTATGCCCAGGGAAAGKCCGCCACCATKCCATGACTTKCCAGC
ARCTGCCTATCTTCCACCACCGCAAAACGTTACAACAGCATCAGTTATTG
AGTAGGTTTTATATACTTTTTTAGCATATGCTTATACATGTATATCATGT
CATCACAAAAAAAATCTTGAACAAAGATCAAGAAAAGGAGAAATGGTCAA
TTATTTTTTTTCATCATATTTATGCATATAGCTCAGTCTTTTATAAATAT
ATTTCATCCAATTATACAGAGCCCCTGTAACGGGGGGAAAGGGGTTAATG
CGCCTGCAGAAGCCTCCAAAATATGAGCTTTTCCTAGTTAGTACTGCCGG
AACAATAGGGTTCATTGTCCCAAACTTTTTTAAATTTTTATAGCAATAGC
ACTAAAAAAAAAATTCAGAAATTTGTCTTTTATAAAAAAAAAGTTATTGA
TTCTAATTTTTCAAAAATGTTTTTTGTCTGAAATTTGGTATTGATAATAA
AAACATTCTTTCATAATTAACAAAAAAAGCACATCCCCCTCCCAAAAAAA
ATAGAAATCCTATACACGGGCCTGCCCCTTTCATCCAGCGATGGCTGCCT
CCTGCACATATCAAGTTTTTTAGTTTTAAACAAAATGAATGGTGAATTGC
CTACTTCAGAATATTGAACATTCGGCCCAATTAATTGTATATCCACTGGG
TGAATAAGGAATCCTTCTCGTTCATTCTGAAATTCGTTGTGACCACCCTA
CTTTGTATTTATATTTCTGGGGTGAGAGAAATATCCACAAACACATTAGT
TTAAAAACTTCATTTGATTTATGAGACATGATTTGGTTCCTATTATATAG
TCTTTGGAATAAAATTCGTCAAATTCTAATAATTTCATTGTGATGATAAA
TTTTGCTACATCATGGGCAATTTTTTTTTAACTTTTAAAATTTGACTAAT
AAGGGTACTGTAAGATATTAAAAAATAATATAGGACTCTGCAGTAATTAA
AAAGATGGACATCACTTATGTAGACCAGTCTTTCTCATACTTCATTTCCA
ATCAGGGCACTTTCCAAATGTATATAAAATCTCAAAGCCCCCTTTATAAA
AAAATTATGATAAACGACAATACCAATTTCCTTAATTGAAAGACCCTGTA
CTTTTCATGATGTACGTTTGTCAGGCTTGAAAAGCTCATTTTACAAGGAT
AATTAATATAAATTAATAAAGCAAAAATTGTCTGTCTCACGTTTTCTGTC
GGATGAGGACTCATTTTTAAGAACGAGCTCATTAAAAAAAAAAGAATTCA
TATAAAATAAAAAATAATGAATGTGGCTTTAGATAAGGTTAGCAACGAGC
GTGTGTAGGTAAAGCACACCAGGTGAGCATTCTAGAGACTAAAATTTCTC
CCTAGCTCATCAAATACTATATAAAAAATTATCAAACTGCTAAATTAATC
TTTCATTATTGAGGAGAGAATTGGTAACTATTGAGTAATTATGTGTGAGA
TAGCTCATGAAAAACGGAGATTAACTCGAAGAATTTTTTAGTGGGTTATC
TACTATATTATTAAAGCAAAGCCCGTTTCCAAAACCCAACTACTCATGAT
GTTTCAGTCTATGTCATTCAAATTATAGCCCATAAGTGACAATCAGTTTT
GGATACTGTAGGTGCAATTTCCAACACGTCTATATGGTTGATAAGAATAA
TTAGTCTATGGAAATAGACAAATTATTCGTCAAACAATACAAATACTCTA
TTTTGAGAAAAATCCTTCTACCTAACTTTTGTCTTGATGGTAGTGTCGGA
TCAGTCTAAAAAAAAAAACTAGAAAGACTACAATCCTATCAGTCCGGTTC
TAAAAAAGAAGCGGCCCTTCTTGGTCTTTTAAGCTAACTACAGCAGCAAG
AATTATGGTGAACAACTGATTCTTTCAGTTGTTCAAAATAACCTTATTCA
AGAGACAAGATAGCTAAAGTTTAAAGTAGGAGATGTGTTGTTAGAGCTTA
TTATTATGGGTTATAGTTATCATTAAATATTTTCTTCGTTTTTATATTCT
TCAATCCTAGCTATGAGTGAAGAATAGAAAAAGATAGCTAGGATTGAAGG
ACCGACTAATCGATACTTAAGACTGTTAAATGTTAAAAATAATGGACAAA
TAAAAAAAGACTTAAAGGGGGATGCTGATTAGGAAATCTGTTCTAGGACC
AATCCAACACAAGTMGASGAGCCACATATGTCGAAGTTCTCGAAAACTCA
AACTTGGGAAAACTCGAAAAAATTTACTCCAATCCAAAAACTATTGTGAA
ATAAAAAAACCATATTTGGAATGCATTTAGTTTTATGTAACTTAATTCGA
AATTGTTTTTGTGTCGGCAGACAACTTATCAATACTAAGGATTAAATATC
AACCTTTGCTTTACCTTATTACATATTTATGGCATTGTAAGTTTTTGATT
TGTCATTCACTTCTGAAGAGGGAAATCGAACCTTTAGCTTCCCTAAATAT
TTATGAAGACCTTCAATTTGTAAAGCCTCATGAATATTTCGTGTATCGTT
TGTTATTTTTTTAACCTTTCATAACTTTTAGCTTATAGACATTTTTCCTC
TCATGAATTTTTATAACAAATCTCAGTAATGCACATTTTATTTACTTTTA
TAGGGAAATGTCTCATTCAATGCAAGAGCCACTCAAGGATATCCATCCAA
TGGATCACAATGTTATCAAAGTTGCCAATGA

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