EMLSAT00000004297, EMLSAT00000004297-700144 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004297
Unique NameEMLSAT00000004297-700144
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s225supercontigLSalAtl2s225:238711..240183 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004297 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004297EMLSAG00000004297-687063Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018674EMLSAE00000018674-727602Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775106auto775106Lepeophtheirus salmonispolypeptide
EMLSAP00000004297EMLSAP00000004297Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004297

>EMLSAP00000004297 ID=EMLSAP00000004297|Name=EMLSAP00000004297|organism=Lepeophtheirus salmonis|type=polypeptide|length=490bp
MTRYGRETNGHSSSRRKSSGSIKPSGIPSTNNGFTNSHHNNNNPHTSDVY
QVSRNGXXANSWSKLGNRVFGEGDESLINRKLPKELLLRIFSHLDVVSLC
RCAQVSKSWNVLALDGSNWQRVDLFEFQIDIEGVVVENIARRCGGFLREL
SLRGCQAVGDXAXATFSQHCNNIESLNLKYCKKITDRTAQSLSLYCHKLQ
XLDLSSCXAISDLSLTALSQGCNNIYHLDISWCDLVTAKGLKALSDGCRK
LQHFISKGCLHISDEALIHLARNCKLLQTVNIQGCRNVQDDGVILLAENC
PDLRYLCVSNCGHLTDSTLLALASNCPQLSKLECXAVSQLTDTGFQALAK
NCHLLERLDLEECVLITDATLSVLSAYCPRMESVSLSHCELITDEGIRQL
GLSPCSSEHLTVLELDNLPLITDTSLDHLVSCHNMQRIELYDCQLITRAG
IRRLRNHLPNIKVHAYFAPATPPPSAGGPRQRYCRCCIIL
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mRNA from alignment at LSalAtl2s225:238711..240183+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004297-700144 ID=EMLSAT00000004297-700144|Name=EMLSAT00000004297|organism=Lepeophtheirus salmonis|type=mRNA|length=1473bp|location=Sequence derived from alignment at LSalAtl2s225:238711..240183+ (Lepeophtheirus salmonis)
ATGACACGCTATGGAAGAGAGACGAATGGTCATAGTAGTAGTAGGAGAAA
AAGCAGTGGATCCATAAAACCCTCAGGGATTCCCTCAACGAACAATGGCT
TCACTAATTCACATCATAATAATAACAATCCACACACCTCTGATGTTTAC
CAAGTTTCTCGAAATGGARCCKCAGCCAATAGCTGGTCCAAACTAGGAAA
TCGAGTATTTGGTGAAGGGGACGAGTCACTCATTAACCGAAAGCTTCCCA
AAGAACTCTTGCTTCGAATATTTAGCCATCTAGATGTTGTTTCACTTTGT
CGCTGTGCTCAGGTCTCCAAGTCCTGGAATGTTCTTGCGCTGGATGGAAG
TAATTGGCAAAGAGTTGATCTCTTTGAATTTCAAATTGATATTGAGGGTG
TCGTTGTGGAAAACATTGCTCGACGATGCGGGGGTTTCCTAAGGGAGCTT
TCTCTACGAGGATGTCAAGCCGTTGGGGATAKCGCARTAGCCACATTTAG
TCAGCATTGCAATAACATTGAGTCCCTAAATTTGAAATATTGTAAAAAAA
TTACGGATAGAACGGCACAAAGTTTAAGTCTATACTGTCATAAATTACAA
TKCCTCGACCTGAGCTCATGCRCTGCCATTAGCGATTTATCTCTGACTGC
TCTTTCTCAAGGCTGTAACAACATATATCATCTGGACATCAGTTGGTGCG
ATTTAGTTACAGCAAAGGGCTTAAAAGCGCTCTCAGATGGATGTCGGAAG
CTACAACATTTTATATCGAAGGGATGTCTCCACATTTCAGATGAGGCTCT
CATTCATCTAGCTAGGAACTGTAAATTACTTCAAACAGTGAATATCCAAG
GATGTAGAAATGTCCAAGATGATGGAGTCATCCTCTTGGCAGAAAATTGT
CCTGATCTAAGATACTTGTGCGTCTCGAACTGTGGACATCTGACTGATTC
AACTCTACTTGCTTTAGCCTCAAATTGTCCTCAACTCAGTAAATTAGAGT
GTSCAGCCGTATCACAACTTACAGACACGGGTTTTCAGGCCCTAGCAAAA
AATTGTCATTTATTGGAGAGACTTGACTTGGAGGAATGTGTACTTATTAC
GGACGCAACGCTCTCTGTCCTCTCTGCTTACTGTCCAAGAATGGAGTCAG
TGAGTTTGAGTCATTGTGAGTTAATAACAGATGAAGGAATACGACAACTT
GGATTGAGTCCCTGCTCCTCAGAGCATCTCACAGTTCTTGAATTAGACAA
TCTTCCCCTTATTACTGATACATCTCTTGATCATCTTGTTTCTTGTCATA
ACATGCAGAGAATTGAACTTTATGATTGTCAGTTGATCACTCGTGCTGGA
ATAAGACGGCTTAGAAACCACCTACCCAATATTAAAGTTCATGCTTACTT
TGCCCCTGCGACACCACCGCCATCTGCTGGAGGTCCACGGCAAAGATATT
GCAGGTGCTGTATTATTTTATGA
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