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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s225 | supercontig | LSalAtl2s225:250476..256507 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004300 >EMLSAP00000004300 ID=EMLSAP00000004300|Name=EMLSAP00000004300|organism=Lepeophtheirus salmonis|type=polypeptide|length=915bp
MHFKSPIYLSNGALISVGEANACLKALRSHFISQKYQGVVALAFHPSFAY
FPYIVPAITACKQCSIPFYTMNILSEESLSQFPITAILGDSRSLLYIQKN
ISIVKKKLIFEKNIFLYQIHCSNPILLQSFNQLNKSEPILYAITTSGTTS
TKKVVYASHSSVDSNVKDFINCFDSVSAVVVSSPPIFDPFYVDILFSVAK
GLPIFLSTSNVRIRSKVYVKYIMDITSSHILLQMTPTLYNSISFDLLKDT
SKKFTFVLGGEQFPSLSSIPPHSVYYNVFGVTEMSCWQSMVKIESILDIP
ILHVGSNLISNTDVYLVDDKSDRVVGDKIEGRIVVSSQIRRCFRGESCVI
YDAFETGDIGYYEKGYLYFNGRNHDSNIVKINGKRTNLLEMERRLKFILP
STLFHLDFYENALTLYCVNELENVVSSKILTMAXFSSFIMPSKIIKVGKI
PFNANGKVNKDQLRPSFHTKRKEAKNNILKEDVEDLWNKYTGILPKDTNN
FILDGGDSHCSLAFLEELGVDPDIFIEIVLNQSFSDLVTALKGPIIMMVP
SKRQMNVLEHKSKIVETQPSYRRRGFSTALSNVSSIKSINLAWKIDLEKC
IDASVLVVDDCLAYVGSHSGIFLSCCVARGVVKWSIKLPDRIESSAIASS
RFVIVGCYNHALYSIEKQSGAIAWSYSTSGLIKSSPIIIDELVIFGSYDY
FVYSLHRDTGTLCWKTNFVNSXILTSPAVTDGYGYVASLNGFALKLNTFS
GEETWRVKLGTPIFSSGVTLRIGTTELFIFGGANGILYGINCDSSKIMWT
FYAENSIFSSIALQGNTIAFGSHDHHLYIGYICETKFDLTAKIDLGHPIY
STPYFFGPQKLAGISIDGRFVVVESKEVSLDVMLPVNGQIFSSPIIFDKR
LVFGCRDNHLYGFDI back to topmRNA from alignment at LSalAtl2s225:250476..256507+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004300-700147 ID=EMLSAT00000004300-700147|Name=EMLSAT00000004300|organism=Lepeophtheirus salmonis|type=mRNA|length=6032bp|location=Sequence derived from alignment at LSalAtl2s225:250476..256507+ (Lepeophtheirus salmonis)
AAGGACATCTTTTGGGTCTCACTACATATTGGTTTTTACAAAATTGAGTA
GATCTATCTATGACGTAGATTTATTTGTTGACTATTCCATTTGATTTTTG
TGCTCGATCATCAAATTGATTTTTTTAAAGCTGTAAAACATACACTAGTA
AACTGCGTTGACTCATTAGTCACTGTCTGTCATTTGAATTCCAGATTCCT
TATTAATTGTTAGCTACTTCACTGACACTTGCATGAAGGTGAAATGTCTT
TGACTCTCCATACGGATTTGGGGGATATCAAGTGTGAAATATTTTGTGAG
CAGTGTCCAAAAACCTCTGAAAACTTTCTGGCCCTTGCTGGAAGTGGCTA
TTATGAGGGATGTCTTTGGCATAGAAACATAAAGGGATTTATGGTCCAAA
CGGGTGATCCTTCTGGAACAGGAAAAGGTGGCGAGTCCATTTATGGGGGA
AGAACGTTGAGTGATGAAATAAAAGACTCTCTCAAGCACAAAGCCCGTGG
CACTCTCTCCATGGCTAATTCCGGGTCTCCCAATGCAAATGGAAGTCAAT
TCTTTATTACATATGATGCACAACCTTCATTAGATCTCAAATATACGGTT
TTTGGTAAAGTTATTCATGGATTTGATGTTTTAGATGCATTAGAAAAAGT
ACCTGTCTCTGCCAAATATAGACCCCTCCATGATGTCAGGCTTAATAAAG
TCACAATTCATGCTAATCCCCTAGCACTCTAAATCATGCATTTTAAATCC
CCAATATATTTATCTAATGGAGCGTTGATTTCTGTGGGCGAGGCTAATGC
CTGTCTAAAAGCTCTGCGTTCCCACTTCATTTCACAAAAATACCAAGGAG
TCGTTGCGTTAGCATTCCACCCAAGCTTTGCATATTTCCCTTACATTGTT
CCCGCTATAACCGCATGTAAACAATGCTCAATCCCTTTTTATACAATGAA
TATCTTGTCAGAGGAATCTCTGTCTCAATTCCCCATTACTGCAATTCTTG
GGGATTCTCGGAGTCTACTTTACATTCAAAAAAATATTTCAATTGTAAAA
AAAAAATTAATCTTTGAAAAAAACATTTTTTTATACCAAATACATTGTTC
TAATCCAATTCTTCTCCAAAGTTTTAATCAATTGAACAAAAGTGAGCCTA
TACTATATGCCATAACAACTTCTGGTACTACATCTACTAAAAAAGTAGTT
TATGCTTCTCACTCAAGCGTGGATTCCAATGTCAAAGACTTTATAAATTG
TTTTGATAGTGTATCCGCTGTTGTTGTATCATCCCCTCCAATATTTGATC
CATTTTATGTCGATATACTTTTTAGTGTAGCCAAAGGTCTACCCATATTT
TTGAGTACTTCCAACGTGAGAATCCGTTCGAAGGTAGTAGTAATATTTCT
TCGTATTGATCATTGTTATTATATAATTGTTAAATCTATTTTTGTAGGTG
TACGTAAAGTATATAATGGACATTACCTCATCTCACATTCTTCTTCAAAT
GACTCCCACTTTGTATAATTCCATATCTTTCGATTTGTTGAAAGATACAT
CCAAAAAATTTACATTTGTTTTGGGTGGGGAACAATTTCCTAGCCTTAGT
TCCATTCCCCCTCATTCTGTTTACTATAATGTATTCGGAGTCACAGAGAT
GTCTTGTTGGCAGTCCATGGTGAAGATTGAGTCGATTTTAGACATACCTA
TTCTACATGTGGGATCAAATTTAATTTCCAACACTGATGTCTACCTTGTC
GATGATAAGAGTGATCGAGTGGTTGGGGATAAAATTGAAGGAAGAATAGT
GGTTTCCAGTCAAATAAGAAGGTGTTTTAGAGGGGAAAGTTGTGTCATCT
ATGATGCATTTGAAACTGGAGATATCGGTACGTATGTAGTTGCATATTCT
TATTTTTGGATTGAAAAGTCAATATTCAACATTTTAGGCTATTATGAGAA
AGGATATCTATATTTCAATGGACGCAACCATGATTCTAATATTGTTAAAA
TAAACGGGAAAAGAACAAACCTACTGGAAATGGAAAGACGTCTAAAATTC
ATACTTCCTTCAACGTTATTTCATCTGGATTTTTATGAAAATGCATTAAC
TTTATACTGTGTTAACGAGTTAGAAAATGTTGTATCTTCTAAAATACTGA
CTATGGCGGRTTTTTCTTCTTTTATTATGCCGTCAAAGATTATTAAGGTT
GGTAAAATCCCATTTAATGCCAATGGAAAAGTGAATAAAGATCAACTTAG
ACCCTCATTTCATACCAAGAGGAAAGAAGCAAAGAATAACATTTTGAAGG
AAGACGTTGAGGACCTTTGGAATAAGTACACTGGTATTCTACCAAAAGAT
ACCAACAACTTTATTTTGGATGGAGGAGACTCTCATTGTTCTCTTGCGTT
TTTGGAAGAACTTGGTGTTGATCCTGATATCTTTATTGAAATTGTTTTGA
ATCAATCATTTAGTGATCTTGTTACAGCTTTAAAAGGTCCCATTATAATG
ATGGTACCCTCTAAAAGACAAATGAATGTCTTGGAACATAAATCAAAAAT
AGTAGAAACGCAACCCAGCTATCGAAGAAGAGGATTTTCTACTGCTTTAT
CAAATGTATCTTCAATTAAGTCGATAAATTTAGCATGGAAAATAGATTTA
GAGAAATGCATTGATGCAAGTGTTTTGGTAGTGGATGATTGTTTAGCGTA
TGTAGGATCTCACTCTGGAATTTTTTTGTCGTGCTGTGTTGCTAGAGGTG
TAGTCAAGTGGAGTATCAAGTTGCCGGATCGAATTGAGTCTTCGGCCATT
GCATCATCAAGATTCGTCATCGTGGGATGTTATAATCACGCACTATATTC
GATAGAAAAACAATCCGGAGCCATTGCATGGTCTTATTCTACATCCGGAT
TGATAAAATCATCACCTATTATCATAGATGAGCTAGTGATATTTGGCTCC
TATGATTATTTTGTATATTCGCTTCATCGTGATACTGGCACCCTATGTTG
GAAGACAAATTTTGTAAACTCATKTATMCTAACGTCCCCAGCCGTTACAG
ATGGATATGGATATGTTGCGTCCCTGAATGGATTTGCTCTTAAATTGAAT
ACCTTCTCTGGTGAGGAGACTTGGAGAGTTAAACTCGGTACTCCAATATT
TTCTTCAGGAGTGACGCTCAGGATCGGCACTACAGAGTTGTTTATATTTG
GAGGCGCAAACGGTATTCTGTACGGAATTAATTGTGACAGCTCTAAAATC
ATGTGGACATTTTATGCAGAGAACTCTATTTTTTCATCAATAGCTCTTCA
AGGAAATACAATTGCTTTCGGTTCACATGATCATCACTTATATATAGGGT
ACATCTGTGAAACTAAGTTTGATTTGACTGCAAAGATTGATTTAGGACAC
CCAATTTATTCAACACCATATTTTTTTGGGCCTCAAAAACTAGCAGGTAT
TTCAATAGATGGTCGCTTTGTTGTTGTTGAATCCAAGGAGGTATCCCTTG
ATGTCATGCTTCCTGTCAATGGTCAAATATTCTCGTCTCCCATAATTTTT
GATAAAAGATTAGTTTTTGGATGTCGAGATAATCATTTATACGGATTTGA
TATATAAATTTGTGATAAATTTATTAATTAGAAATTATAACACTAGTATA
CACAATTAAATTAATATAAGGTACATTATCTTGATAACTGAAAAGTACAT
AATATTTTTAGAAACAGATAGATAAAAACACATCTTACCATTATTTTAAT
TCATAGACATGAAATTTGTTACGTAATGTAATATCAAAATTAGAATAAAT
CTATATCATAACTAAATGAATAATTAAAAATAGCTAACTATATCAAATAA
ATTCAGGATTCATTCATTAAGGATGTATAATATACAAGAGAGGTATGCAC
CATTACAGGAATAATTTTTTAATTAATTTAAGCCAAGAGCAAATAGTTTG
AATTATAGTAAATTTGAAAAGTTTTATAGTATATTACATTAGAAGTAACA
CATTTTATTATCTGAATTACAACAGGTTTGAAAAATAAAAATATTTCATA
CTGTCCAGAGACTGGTATTGTACTTATAAGCACGAATAAGCTCGTGATTT
TGAAATTATAATTAAATTTAACGACTGAAAATAAAAACTTAAGACCTGTA
GCAGTCATGCTACGTTCTTTTATCATCGTTTTTTGATACTTGTCTTGGAG
ATGGAGTCTCCATGGTACCTGAGGAAGATAAAGTCCTAACTCTTCCAGTT
GATTTGGAATTGTCACTTTTATCATTGGCAACCATGTAGACATGAAGGTT
CGTATTAGCAGGCGAAGGAGATGCAGCTACAACAACTAAAGATCCTGAGG
TTGCGTTAGCAAGACCTGGATTTGCAGCTAACAATCCTGGTGGGAATGTA
TTATCTTTGTCAGATTGTTCAAGGATCGAACTTTCTGAATTTGAAACATT
GTTTTTTCTTTCCACACTAGGAACAGGAGTAGGACTAGCATTTTGAACCC
ATGAAATATCATTTTGGGTATTTTCTTCCTCATTCTCAGAGGAAGGGGAT
GAAGAGTAATAACCTCTACTTCGTCTGAGGGTTTTAGATGTTCTACGTTT
TTTCTTTGATTTCGTATTGTCAGATTTCTTATCTGCGGACCGTTTACGAG
ATGGCCCTTTCTTTTTCCCATTGGTGAGCACAACTTGTTCTTCTTCACTT
TCAGAACCAATAGTAGATAAATCAAATTGTCCACTTTGACTCAAACAACG
ATCCACTAAATTACGATTTCCACGTTCCTCTTTTTTAAATTTCATTTTTA
GGTCATAGCGGTCTCTTTTTTTAAATATAGATGCCATCATAGAGAAGTCC
GTTCCAAATATGCTCAAAGCCTTATAAAATCTATTTAAAAAAACCATTAT
GAAGGTTTTAAAAGATTAAAACAAAAAATAATAATAATAACCCACCGAAC
TGTTTCCTTTTCGCCCCATTCTGAATTCTTTCGTTTCTTGGCCCATGTTC
CATAGTTGGTTGATTGATTTTCATAGACTAACGATGTTTTTAAGAGATCT
TCTTTGGCCTTTTTTGTTGCTGTTGTTTCAATGAAAGTCGAATCCTCATC
CAAAACAATTTGCCCATCAGGACCAATCTTAACTTGAGGAACAGGCATGT
GTTGATCCTCTTCAACAGGCTCATCCTCTTTATCAGACAATGAATTTCTA
ATCGGACTTGGATTATCTTCATCCCTTGTAATTTCTTCAACAATTTCCGG
CACAGAACATTGAGTCTGGGAGTTCATTCTGGAGCCTTCCGAAGGGTTAT
GAAAAATAAAATCAAAAACTGTCATTTTGGACCGTTCTGGAACACCTTTA
TTGAATCTTTTTTTGTGATCTGCTTTGCGTTGATCAAAAACAGGGATTTC
TATGGGTAAATCCGAAATGAATGTACTCGAAATAGTTCTTGTTCGACATG
ATGATCCATTGGAGCTTGAACTGATTGTTCTTTTCCGACTTGGACTCAAG
TTGGGTATGAATTTAGACTTTGGGAAACCCGCTTTTTTGGAGCGGAGTTG
CTCTGAAGACTCTTGGACTTCTCGTTCATCATTCTCTTTCTCGGAATAAG
TTTTTTCTTCCTGATTTTCTTCCCAAGATGTTGGAAACGAAGAAAAGGAT
GATGATGGAGGTGGAGGAGAGGGAAGCGTCTCCTCAGGAGCGGAACTCCT
TTCTTCCTCTACTACTAATGGCTGKATTTCTTTAGGAGCCGCAGGGTTGT
GTACTTCCAAGGGAACTCCTTCAAGTGCAATGCTTGCTTTATTTCGACTC
AAGTTCTTGAGATTCGGAGTGATTTTTAATCGAGCACGCCTCATGTCTCA
ATTGAATGACAATTCCACGTTCAACTGTCAATCATTCACTCAATTTTATT
TCATTTTGGATGAATAGGAATTCTGAATTCGCAAGGTAGGTAAACACTTG
ACTCCTATTGAGTTAAAATACCGAAAACGAAGATGCGCCCACTTAACAGC
CGAATTGACATTAGACGGTGAAATAGCATAAC back to top
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