EMLSAT00000004315, EMLSAT00000004315-700162 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004315
Unique NameEMLSAT00000004315-700162
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2272supercontigLSalAtl2s2272:5763..9474 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004315 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004315EMLSAG00000004315-687081Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018758EMLSAE00000018758-727686Lepeophtheirus salmonisexon
EMLSAE00000018759EMLSAE00000018759-727687Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768710auto768710Lepeophtheirus salmonispolypeptide
EMLSAP00000004315EMLSAP00000004315Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004315

>EMLSAP00000004315 ID=EMLSAP00000004315|Name=EMLSAP00000004315|organism=Lepeophtheirus salmonis|type=polypeptide|length=254bp
MKFTPTEEYYNVLKMTPIPSFNTETREFVSSIRDMVKWREYEIDLITETA
IQFTQDFPDETNENMHLYVCKRLQYRRKCSVIMKLQKPNTIEKINSARSL
YTRCSETNDYTELVVXSNPTPSEGEVIPLSQRVPIRLIDLNISEYTPRQI
IHTPESGFNYVPFIFHVPPDIMGRQHKLIQMNGRHTQRGHPSIPMPSQDL
TTLSSPSHTPKTAGLFVNKEGLMNAVIRALMDLPTEIYTIISAPMNIHXF
TYLP
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mRNA from alignment at LSalAtl2s2272:5763..9474+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004315-700162 ID=EMLSAT00000004315-700162|Name=EMLSAT00000004315|organism=Lepeophtheirus salmonis|type=mRNA|length=3712bp|location=Sequence derived from alignment at LSalAtl2s2272:5763..9474+ (Lepeophtheirus salmonis)
ATGAAGGATGTTAAGCAGCAATCGTTCCTATCCAATCGGTTTGGTTTACT
CTATAAAACCGAAAGGAAAAAGGGAGTAGGATCCTTTACGAAAATCTGGG
CTTTCGGGACAGAACCAAGAAAGTCGATCCGGATTTCGTTTAATAAGGTA
TAAGTATGGGCATAGATGTCATTGAACAAAGATGATATTTCAACAACAAT
TTATAAATGTCAGAAGTAAGTGAAGTTTTATTTTTAAATAAGCATATATT
TCAAAGATATATTATTGGCTATTTAGAGTGACTTCATATGAAAAAGAAAT
CAAACAACGGAAGAATACTGGCTCAACAAGAACACGAAAACTCCAATATT
TGGATTTCAATTTCCCCGGCAATTTACAGGTGGCGCCGTAGTCTGTGACA
ATCTTTTGACCCTTATAACTTGATCAGGGGCTCCAATGATCAAGAGAGGG
TTATGTAGGTATATACTTAAGATGCTAATGGTTAAATTTTAATTAGTCTT
ATGTACTATGTATGCAGGGAAATAAAGACTTTATATACTTCGATATTGTA
AATGGAAAGTAATATACTAATAGTCAGCTTAGGGGTGGGAGGTAGGATGA
AGACGCACGTGACTTAGACAAGAATTACTAAGAGTTGTGTGCAAAAGTCT
TTTATGAAAAAGGGGGTGGGGGTGGGATAGAGATATGAAGAGTTAGAATA
GGGAGATGGGTAAGGGTAAGCCTAAAACACACGCCCACTAACCTTCAAAA
ATTCGTTGGATTGAATTTTGACACTTGTATTTTGACTTCCAAACGATCCA
KCTGTGCTTTCTGAAGCTCCAGTGACRAATAGGAAGCCGATTGTCCAGAA
TTGCCTTGAGATGTATGGACCAGACATGGTTCACTTATAACAGTCCCAGA
TTGTAGGGATCGAGAGCGATTTTACCAATGTCTTTAGGGTCTGATGCCAG
CTGTCGAAGTGTGAACACATTGGAAATTTTGCTCTCGATCCCTACAATCT
GGGACTGAGGTAGCATTTTACTGTCTGGTTCAAAACTTCTCGGGAACAAT
TACGGTCAGCATCATGGAATACACGTCCTGCTCTACCCATGGTGAATATT
GACTGATGGYAGTGAATAAGAAAGTTAATTTGGATTTGTGGGCCTGCGTT
CTTACTATTCCTACTATTCAACATTATCTTGTCCACCCACCACCGTCTGT
GATGTTCTTCTCCTACTCMCCCTGCCGTTCATGCGTCGTCCCTCTGTATT
CAGCCTATAAAGGACCAGGTTGTATACTTATTATATTAGAGTGAAGAGTC
GTAGTTCTTCTCTCTTTTCCTACCTACCTACTATCCTCTTCTTATACTTT
ATGTAAAAGAGGTTAGGTGTTTATCTTACTTGTTGCGTTCTTCTCATAAA
ACATTGCATTTAGTTGCTCTATCTGAGTTGATATTTCCAACTTTTCCTAT
ACTTTTTCATACGTACTTTTTTGTTTTGTTTATTTTGCTATTCCCCCTTT
TCCTAGCAATTTGTGTCAATATAAAAGAATTGAGCTCCTTAAATGATCAC
GAGCATTGATTCCAATACATTGGGATGTCCCCTCTGTAAATTCAATGCAG
AATGTAATCTAGGTCTGAGGCTACATATTAATGCAGCCCATCCCTCAGAA
TGGGAGGAGTACACCCATAGGCACTATGCTTCAACTACTCCTCCTCATTG
GGATATAATTTCATACAAAGCTCTTGCCTCAATGGCAAAATTCCTCATAA
GGGAACGCCCCCGTGAGGCCGAGCAAAGCATANCATTCATGGTTATCACA
ATTGTTTATCATCCCCTGTGATGAAATAATGAAATTTACACCTACTGAAG
AATATTACAATGTTCTCAAGATGACCCCAATACCATCCTTTAACACTGAG
ACTCGTGAATTCGTGTCCAGCATAAGGGACATGGTCAAATGGAGGGAATA
TGAAATTGACTTAATAACAGAGACTGCTATCCAGTTTACACAGGACTTTC
CTGATGAAACTAATGAGAATATGCATCTCTATGTTTGTAAAAGACTCCAA
TACAGGAGGAAGTGTTCTGTGATAATGAAATTACAGAAACCAAATACCAT
TGAGAAAATTAATTCGGCTCGTTCGTTATACACTAGGTGTTCTGAAACGA
ATGACTATACCGAATTAGTGGTTAAMTCGAATCCTACCCCCTCAGAAGGG
GAGGTCATACCCTTGTCTCAGAGGGTGCCTATTCGTCTCATTGATTTGAA
TATCTCTGAATACACCCCTAGACAAATCATACATACCCCAGAGTCAGGAT
TTAACTATGTTCCATTTATTTTTCATGTTCCCCCTGACATCATGGGACGT
CAACATAAACTCATACAGATGAATGGACGACATACTCAACGAGGTCATCC
CTCTATTCCTATGCCGTCCCAAGATTTGACAACCTTGTCATCTCCATCTC
ATACTCCTAAAACGGCCGGGCTCTTTGTAAATAAAGAAGGCCTTATGAAT
GCCGTAATACGGGCTCTTATGGACTTACCAACTGAAATTTACACCATAAT
ATCAGCCCCGATGAATATACACTGNTTTACCTATCTCCCTTAAGCATTAC
AGTTATCCTTTTCGTGATGCTGCTTTGAGATACCTAAATACAGTATGGCC
TAGTGTGAGAAAGAAATATAACGCCTCACACACAAAAGCCTTCCTTAACA
TCTTAGTTTACCCTGTAAACCTACATTGCTTGCCCATATCTCTTAAGCAT
TACAACTATCCTTTTCGTGATGCTGTTCGGGCTACAAGGGAATACATTAA
GGCCCAGAGGGAGATGCTGATTAAACTTAATGCCTCTCTCACTTAAGCCT
CCTCTTACTTACATATTATATAATTTGTTTCGTTGTATAAATGTTATTAT
TATATAATTGAATACCCTAATATTATATAATTTGTTTCGTATTGTAATTG
TTATTATTACATAACTACTTTCTATTATATAATTACCTACTTGCCTCCCT
ATGAGTATTAACATTACCCTTTTTAATGTTTATGCTTGGTGATACCTGAA
TACCATATGGCCAATGGTTTACTGTTCCCATTGTGAGCGGACTAGTATTC
TTATTGTGCCTCAGATCTTTGGACCCACCCGCTCTGATTATTTTTCGGGC
TATGCTCCTGTGCATAATCTCAGCAAATGGCCCCTTTTTCTTTTCTTCCT
ACCTTTTTCTATATATATCAACCCACTTGATGCTCTATCAGCGATTGTGT
TATGGTTGATTGCAACTATGTTGGAGGATGCCTGTCTCTTTACTAAAGGC
TCCTAGAAATAATACTCCTACCTTACCACCTCCTTCCCTCATGAAGTTCT
ACTCTCTTCCTCTTTTATATAGGTCGTGGATAGGTTGTGGCATCAACAGG
AGAAACAGACTACTTGCTGGTGTTGAAGGAAAATGTGGTCTCATAGATCA
TCAAGACCATGAAGAAGTCTATCACGTACACATTTTAGCACACTGGGCTC
CGGCCCATACTGAAGTTCCCCTCTAGTGATTTCAGACTTACTCATTGATG
TAACATGTAAAAATCTTTACAAGCTCAGAAATGCTATAGATACAATGAAG
CTTAGAAGTATTAAATTTGAAAGAGGATATTCAGAAATGGAGTTGTGCCT
CACAAAATTGAAATCCAATTTATCCATCATTTCTGAACGCCTTTATATTT
TCTGAAATCAAA
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