EMLSAT00000004335, EMLSAT00000004335-700182 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004335
Unique NameEMLSAT00000004335-700182
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2283supercontigLSalAtl2s2283:3..1736 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004335 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004335EMLSAG00000004335-687101Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018852EMLSAE00000018852-727780Lepeophtheirus salmonisexon
EMLSAE00000018853EMLSAE00000018853-727781Lepeophtheirus salmonisexon
EMLSAE00000018854EMLSAE00000018854-727782Lepeophtheirus salmonisexon
EMLSAE00000018855EMLSAE00000018855-727783Lepeophtheirus salmonisexon
EMLSAE00000018856EMLSAE00000018856-727784Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767740auto767740Lepeophtheirus salmonispolypeptide
EMLSAP00000004335EMLSAP00000004335Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004335

>EMLSAP00000004335 ID=EMLSAP00000004335|Name=EMLSAP00000004335|organism=Lepeophtheirus salmonis|type=polypeptide|length=297bp
GFSFGAQVCSFAGSNIPNCNRITGLDPAGPGFREHNTSFRLDKSDADFVD
VIHTNGRNFLKGAIGLIEVSGHVDFYPFGGETQPNCKNLFEEFLXGKDSG
CSHYRAVYLFLESIKNDKCKMVGFPCSGGWNGFQSGEQGCFNESMAFPLG
LNTPRNATGELYLTTRITEPFCGNQVKVEISLEFSPSWSSILITRILEII
FQTTGGEKRESFIVVSGFSTXDTFGRVMTVDASIPFENIYLKYSIGGISS
FFGRVEELTILNLRIIDVKGSATLWKLENKSGKIQSGTEEKLVKNQN
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mRNA from alignment at LSalAtl2s2283:3..1736+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004335-700182 ID=EMLSAT00000004335-700182|Name=EMLSAT00000004335|organism=Lepeophtheirus salmonis|type=mRNA|length=1734bp|location=Sequence derived from alignment at LSalAtl2s2283:3..1736+ (Lepeophtheirus salmonis)
GGTTTTAGTTTTGGAGCACAAGTCTGTTCATTTGCAGGATCTAATATTCC TAACTGTAACCGGATCACAGGTGGTTCCTTTGTATATATATATGTAYATT GTACATAAATGTCGTATAAATTTTGTGAAAATAGGATTGGACCCTGCTGG ACCCGGATTCAGAGAGCATAATACATCTTTTAGATTGGATAAATCTGATG CAGACTTTGTTGATGTCATACACACAAACGGTAGAAATTTCCTTAAAGGA GCCATTGGTCTTATAGAAGTCTCTGGTCACGTTGACTTCTATCCATTTGG AGGAGAAACTCAACCAAATTGTAAAAATTTATTTGAGGAATTTTTATGTA GGTTTTATTSAATGGATTATGYGATGTTATACAATAATATTTATTTGACA TAAATAGYGGGAAAAGATTCTGGTTGTAGTCATTACCGTGCGGTATATTT ATTTTTGGAAAGCATTAAAAACGATAAATGTAAAATGGTAGGATTTCCTT GTTCTGGAGGTTGGAATGGATTTCAATCAGGGGAACAAGGTTGTTTCAAT GAATCAATGGCATTTCCTTTAGGACTTAATACCCCTCGYAATGCAACTGG AGAGCTGTATCTAACGACAAGAATTACAGAGCCCTTTTGTGGTGAGTTAA AAATGAAGACCTGATACTCATGAGATTTATGATAAATTGCCATAAGATAA CAACTATTTTCTTTCCATGCATGTTATATATGATGAATGTTAATTTAAAA ATCTAATTTGCCGCAGGTAATCAAGTAAAAGTTGAAATAAGCTTAGAATT TAGTCCCTCATGGTCATCAATATTGATTACACGTATTTTAGAAATAATTT TCCAAACTACAGGGGGAGAAAAAAGAGAATCCTTTATTGTTGTTAGGTAA ATTAGTTAAAATTAATTAAACAATCAATTTGTATACCTCACAAAATTAGT ATCATTATAAATTTGACATTTTCTCTGGAGAAAACTCATGAAAACCAAAG TTAACCCTAGTCTAAATATGAAAATTTTCCAATTTCAGCGGATTTTCGAC GYCAGACACTTTTGGTAGAGTTATGACGGTAGATGCAAGCATCCCTTTTG AAAATATCTACCTGAAATATAGTATTGGTGGTATTAGTAGCTTCTTTGGG CGGGTTGAAGAGTTGACTATATTGAATCTGAGAATAATAGACGTCAAAGG TAGTGCCACATTATGGAAACTTGAAAACAAAAGTGGAAAAATACAAAGTG GAACAGAAGAAAAGTTGGTTAAGAACCAAAATTGATTCGTATTTTTCAAA ATTCACATAAATATATATTACCATATTTTTATTATGCAATATTATTAAAA TTCAACTGCATTGAATTTACAAAGTGTGAAACTCGTCAAATTATACAATT GATTATTGATTTGTTAAAATAGATTCAAAATTACATTTTCGGAAATTTAA ATATATATCTTTCATGTTTTTTCATTTGAGTATTTTAAATGTGTTTCAAT TTTAGATGAGTATAAAATTATAATTACCGAAATTAAAATAGGCGAGAGTG AGGCCTTTTTATTTTAAATTGAAAAACATAAAAATTGCTTACTTTAAAAT TGAAGACTATCAAAATATTGAGCATTTATCTACCATATACTATCAATAAG AATAAAAACAATTTTGTAGATAGTTTATCTCTTTAAAATTTTAATATCTA CTTAATGTTGACAAGTTGATGTTCATTGTACATT
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