EMLSAT00000004358, EMLSAT00000004358-700205 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004358
Unique NameEMLSAT00000004358-700205
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s229supercontigLSalAtl2s229:633232..637858 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004358 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004358EMLSAG00000004358-687124Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019011EMLSAE00000019011-727939Lepeophtheirus salmonisexon
EMLSAE00000019012EMLSAE00000019012-727940Lepeophtheirus salmonisexon
EMLSAE00000019013EMLSAE00000019013-727941Lepeophtheirus salmonisexon
EMLSAE00000019014EMLSAE00000019014-727942Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779015auto779015Lepeophtheirus salmonispolypeptide
EMLSAP00000004358EMLSAP00000004358Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004358

>EMLSAP00000004358 ID=EMLSAP00000004358|Name=EMLSAP00000004358|organism=Lepeophtheirus salmonis|type=polypeptide|length=102bp
MDKFQFLREIYPDILLARTFDRLKTIEDLKEVFLESETLIFIDEESPRIA
SGEGFKQICEKIANTLTVLGGRDYIEFIKCLGFKYAAVPFTRKSSHIRKR
KI
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mRNA from alignment at LSalAtl2s229:633232..637858-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004358-700205 ID=EMLSAT00000004358-700205|Name=EMLSAT00000004358|organism=Lepeophtheirus salmonis|type=mRNA|length=4627bp|location=Sequence derived from alignment at LSalAtl2s229:633232..637858- (Lepeophtheirus salmonis)
ATGGATAAATTCCAATTTCTGAGAGAAATATATCCAGATATATTACTAGC
AAGAACGTTTGATCGATTAAAAACTATTGAGGATTTGAAGGAAGTGTTTT
TGGAGTCGGAAACCTTGATTTTTATCGATGAAGAGTCTCCCAGGTTTCAG
AGTTTTATTATTTTCCCCTAAAATCATATGATATCGTTTAATTTCCGTAG
AATCGCTTCAGGTGAGGGATTTAAACAAATTTGTGAAAAAATAGCCAATA
CATTGACTGTACTGGGAGGACGGGACTATATTGAGTTCATCAAATGTTTG
GGTAAGATTTTTCATCATTTTTTGCTCTTACGGATTTATTAATTATATTA
TGTATAACAGGTTTCAAATATGCGGCAGTTCCGTTTACGAGGAAGTCTAG
TCACATCCGGAAAAGAGTTATTAAATGCTTAAATCAGCTCTCCAGTACTT
GCTCAGCTAACTTAAATTACTATCTAATCKTTGCTGACATTTTTTGCTTG
AGGAATAAATTTAAYGGACTCTACTNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAACTACATGTAC
AGTTTGCGAAAGCAAGCATGCATCATAACATATATAAATTKMWAACAAGT
TAACGAAGGGCAATAATACATTCATTGGTTTTTGAAAGAGCAGTTTTGGG
ACCTTCCTTTGTACGCCATTTATTTTTGGTTTCGTGATGTCATCGAAAAA
ACGTAGAATGCTTAGGTCCTGTTTGTGATGTGGTCAAGATTGTGGAAGTG
AACAGGTCCACTATTTTGAGGATAAGAAAGGTGTTTGAGGCTAATAGCAG
CTATGAACGGAAGCCTCGAAGTGAGGGCCACAAATAAAGCGATCGGAGAA
GTTCATGAGTGCCTTGGAAGACAGTCTTGTGGCAAATCCTCAAACCTGGA
TGTGCAAGCTCGCAAAAAGAAAAAAGAACCACGTTAGTGAAAGGGCAATC
ACGAATGCCGTGAAAGACATGGCCCTCAAGAGCCATGTCCACCAGAAACG
CCAGCTTATAATAGTGCGCCCTGTAAACACGCTCGATGCTACATGTAAGA
TTTAATTATTATGACTAAATTGATATTTCATAGATACAAAAGGATTCTTC
CTTATAGAGAAATTCATATCTAAGGCTCTGGTAGGGGTAGACTGGAGACT
GTTGGAACACTTTTTGCTATTAGCTCAACTAGTCGAAGCTTACTTGATTC
AAATACGCCAAAATTTAACAAATTTAATTTTAATCGTCTTGTACTGAAGC
GGGMATTCCGCTAATTAGTGGATTACCGATTAGCAGAATACCAAAATTGT
AAAAACGGACATCTCTAAATTTCATTTTTTCAAGTCATACTACTTTGAGT
AAATGATGTCCAATAGTGTATTGGTGTCACACAAACTTTATTCTTATTTA
GACTCCATAGATTCTTACTTACTTCCAGATAAACTCGTTCAGAAGACATC
ATATTTCAGCTTATAGACCGACTGTAGACCCAAATTTAATCGTTTTCAAA
TCGTGAATGGATTTTTTCGGTCTTGATATATAAATAGATATTATCGGTCT
CAATCAATGGACCAATTTTCTCACTTATCCTGATTTTTGAGTTGTACAAA
AATGATTTATGCGTCACATTAAGCTTTATATGACATTATTGTGCACATGA
TCACAATTTTAAAACACAAATGACGTCATCAGCCATTCATCATTAAACCG
TATATCTAAAATAATACAAAAATGAATTTTGAGAGTTGTTTTGTGATACT
TCAAAATGTATCAATCTGGAWAAGTAAGGAAAAGAGCAACTCCCTCCCCC
CCCCCCCCCAAAAAAAAACAACTTTTATTATTGTCTCTTCTAACCTTAGT
AGTATTATTATGAAAATAAAAAAATATTGTCTTATACACTTCAAATAGCA
TACCAACATATATGCATCTAAAAAACTGTCTAGATGAGAAGTCCATTTTT
TATTTACTTCAAAAAATCGAAATTTGCGAAGAAAATTGCAAAAAAACTTT
TTTGTTCTTATTTTGCAAAAAAATAGTTAATAGTATTTGTTTGAATTTTA
AAAGAAACACAAACCCACCAATATTTTTTTCATACTTGCAAAAACAAAAA
AGTTATGAAGAATAATGCTGTCAAAAATACCCATTCAAACACTTGTTCAT
TTTTGCAAATATTTCAAAAATTATATAATAAAATGTTCTGGAAATTGAAA
ATAGACGTACTTTTAAATTTAAGTCGACATTTTTTTTGCGCAAAAAGCAT
CGTCTTGTGGCATTTTTTCTTAAAAGACTTAAAATTGACGTTTTGATGAA
AAAATGGAGAAAAAAAAGAGAGAAAAAATGAAAAATTATTCAGAAAATGA
CAGATATCTCATTTTCTCATGAATTTTATTTATGTTCAAATTTATATGCA
AACCAATCTACAGACAAATTTCTACAAACTTTATTCTACAGTGTGATTCA
AAATGAGCCGTTTTTGGATTGTAGAAATAAAACCCATAAAATATTATATT
ATGGTCAAAACATTATTATGAACCGAAAAAACAATTATTTCTAGAAAATA
ATCCCCTTCATATGTTGGCCGCAACTGGCCTTTAAATGGTACATTCTTTC
GCACAAATTTTTGATGACGCGTTCGAGCATTGTGAATGGAATCTCACGAA
TAACTCTGTTAAACTCTTGTTTTCAATGGATGTAATGGATGTTCTTGATA
CAATTCGGGTTATTCTTCACCCCAAATACGGCAATTTTGCTTATTTACGT
AGCCATTGGGCCAGAAATGAGCCTCATCACTGAACAAAAGTTGGTGCAGA
AAAAACTGACTTTCTTGGATACGTTCAAGAGCCCATTCACTGAACACACG
ACGCAAACGAAGGTCCAGCGGCTTCGATTCTTGCACGAGGTGTATTTTGT
ATGCCTTTAACCCCAAATCTTTCTTCAAAATGCGCCAGGCTGTTGCATAC
GACAAGCCAAGTTGTTGAGAGCGGTGGCGAATCGATTATTCACGATCTTC
GGCTACACTCTCGGCTGTAAGTGGCCTACCAGACGACGGGACATCCCAAC
AAGTTACTACCCCTACAAATTTTTCGATTATTGTGCGAATTGGGGATTCT
GAAGGTCGATTATGTGGACCATAAGTTGGGTGTAATATGGAAAAAAACTT
CCTTCAATGAACGCTGATTTTCATAGTACAATTGAACAGTTTGTAACACG
TTGTTGTGGCGTATATCTTTCCATGAAGAATTGTAAAACAATACTGAGTA
AAAATGACGTATGAATTTGGCAGAACTCGTGCGCACCTGTCAAAAAATCC
CTAGTGGAAAACCCGCTCGTTTTGAATCACTCTTTATTTACTAATCCCAT
ATTTCATTCGAAGTTCATTTTTTTGCACTTGAAATAAATGAAATTGCAAT
TTCCAGTCATTTTTTTTTTTTTTGTCATAACTTCTTTGATTTTGATTAAA
TTTAGAAAACGTAGTTATTCGTATAGTTGTTATCGAAACATTTTGAGCTT
CAAAAAAAGGTTTTTGGGTTATGGGTATATCATAAGCCCCCCCCCCTATT
TGACAACCTCAAAAATCGGCATCCCCGTCTTAGCCTGTACCAGCTCAAAA
GAGGGACAATTGCACAATTTCAGCCTCCTAGGTTCAATGGTGTGGGAACG
TATGAAGAACATATACATACACGAACACAAATCTCTCTTTTATATATATA
CAGATGATTTAATTTCGTTCCGGGAATCCTCTTCCAATAGGAAGCCGTTA
TGATTGTAAGTAATTCGGTACAACTTTGAAGAACTTTTGAGTAACAAATA
TGACTTTCTTTTTTATAGAAAATATAA
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