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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s230 | supercontig | LSalAtl2s230:287889..295493 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004392 >EMLSAP00000004392 ID=EMLSAP00000004392|Name=EMLSAP00000004392|organism=Lepeophtheirus salmonis|type=polypeptide|length=2347bp
MAGLPPPGFQFYPGPPHPAWAAMMAQQQAAQRAAFQAAAAQQQSVPGPVS
QEQPPPPPPKENLEDKAKKWHQLRCKRYAEKRKFGFTDAQKEEMPPEHVR
KIIRDHGDMSSRKFRHDKRVYLGALKYIPHAVLKLLENMPMPWEQIRDVD
VLYHITGAISFVNEIPWVIEPVYSAQWGSMWIMMXREKRDXRHFKRMRFP
PFDDEEPPLDYADNVLDVEPLEAIRIDLDENGEDAAISQWFYESSQPLID
SVRVNGSTYRKWNLTLPQMACLYRIANQLLTDLVDDNYFYLFDLKSFFTA
KALNVAIPGGPKYEPLIKDPTQLDDDWNEFNDINKIIIRQPIRTEYRIAF
PYLYNNLPHFVHLSWYHTPNVIRIYLLFYFDPLINPISHRHSISNQNKLE
SLLPEDDEEFEIPEECQPFLLDCPLYSDNTANGVSLLWAPRPFDTRSGRT
RRALDIPLVKNWYREHCPPGQPVKVRVSYQKLLKYYVLNALHHRPPKPQK
KRNLFRSFKATKFFQSTSLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHL
DYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDAHVQYRLNN
VDAFQLSDGIQYIFAHVGQLTGMYRYKYKLMKQIRMCKDLKHVIYYRFNT
GPVGKGPGCGFWAPGWRVWLFFMRGVTPLLERWLGNLLSRQFEGRHSKGV
AKTVTKQRVESHFDLELRASVMHDIIDMMPEGIKQNKARTILQHLSEAWR
CWKANIPWKVPGLPTPIENMILRYIKMKADWWTNTAHYNRERIRRGATVD
KTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLX
SRAFAPIPFPPLSYKHDTKLLILALEQLKEAYSVKSRLNQSQREELGLIE
QAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKIT
DAYLDQYLWYESDKRRLFPPWIKPADTEPPPLLTYKWCQGINNLQDVWES
ADGECNVMMECKLEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVVN
YKDMNHTNSYGIIRGLQFASFVVQYFGLVNDLLILGLNRAAEMAGPPKMP
NEFLTFQNIETESSHPIRLFSRYVDKIHMFFRFSSEEARDLIQRYLTEHP
DPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSVTTI
EWESSFVSVYSKDNPNLLFSMSGFECRILPKIRTSHEEFTHRDGVWNLQN
EVTKERTAQCFLRVDNDAMAKFHNRVRQILMASGSTTFTKIVNKWNTALI
GLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT
PKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNL
YRYIQPWEAEFIDSQRVWAEYALKRQEAAAQNRKITLEDLEDSWDRGIPR
ISTLFQKDRHTLAYDKGWRVRTEFKAYQVLKQNPFWWTHQRHDGKLWNLN
NYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKL
TNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPT
LKISLIQIFRAHLWQKVHESVVMDLCQVFDQELDALEIETVQKETIHPRK
SYKMNSSCADILLFAAYKWNVSKPSLLAXTKXTMDXTTTQKFWLDVQLRW
GDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLISIDLAYNLHSAFGNW
FPGCKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNY
GELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLY
LKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGM
LDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFN
LYDDWLRTISSYTAFSRLILILRALHVNNDRTKIIIKPDKTTITEAHHIW
PSLSDDEWIKVEVALKDLILADYGKKNNVNVASLTQSEIRDIILGMEISA
PSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETNTFS
SKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVMIS
DLRTQISAYLYGISPPDNPQVKEIRCLVLAPQWGTHQTVHLPSMLPQHEY
LKELEPLGWIHTQPNELPQLSPQDISTHSRVMSEHTSWDGEKTIVITCSF
TPGSCSLTAYKLTPSGFEWGKNNTDKGNXPKGYLPSHYEKVQMLLSDRSL
PFYEIELSLANPKEFYHEVHRPSHFMNFASFEEGVDWNGADREDMLA back to topmRNA from alignment at LSalAtl2s230:287889..295493- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004392-700239 ID=EMLSAT00000004392-700239|Name=EMLSAT00000004392|organism=Lepeophtheirus salmonis|type=mRNA|length=7605bp|location=Sequence derived from alignment at LSalAtl2s230:287889..295493- (Lepeophtheirus salmonis)
GAATCGCAATGGCTGGACTCCCTCCTCCAGGCTTTCAGTTTTACCCTGGA
CCTCCTCATCCAGCATGGGCTGCAATGATGGCGCAGCAACAAGCGGCACA
AAGAGCTGCTTTTCAGGCCGCTGCAGCTCAACAACAATCCGTGCCCGGRC
CCGTGAGCCAGGAGCARCCCCCGCCGCCTCCTCCCAAAGAGAATCTGGAG
GATAAGGCCAAGAAATGGCATCAACTCCGATGCAAGCGCTATGCAGAGAA
AAGGAAATTTGGGTTCACGGACGCCCAAAAGGTAAGTCTGGACTACTTTG
GCATCCCTGGGTCTATGTTGAGCTTTAATGTGTGATTGCAGGAAGAGATG
CCTCCGGAACATGTCCGTAAGATCATCCGTGATCATGGGGATATGAGTTC
TCGCAAGTTCCGTCATGACAAGCGCGTCTATTTGGGTGCGCTCAAATATA
TTCCACACGCCGTTCTGAAACTGCTGGAGAATATGCCCATGCCCTGGGAA
CAAATCCGCGATGTGGATGTGCTCTATCACATCACGGGAGCCATTTCCTT
TGTCAATGAAATACCCTGGGTCATTGAGCCCGTTTACAGTGCACAATGGG
GCTCCATGTGGATTATGATGSGGCGAGAGAAAAGAGATCSCCGCCATTTC
AAACGGATGCGATTTCCTCCGTTCGACGATGAAGAACCCCCGCTGGACTA
TGCTGACAATGTCCTTGATGTGGAGCCCTTGGAAGCGATCCGAATTGATT
TAGATGAAAATGGCGAGGATGCAGCTATTTCCCAATGGTTCTATGAATCC
TCTCAACCCCTCATTGATAGTGTTCGAGTGAATGGATCCACATACCGGAA
ATGGAACTTGACACTACCTCAAATGGCATGTCTTTATCGAATAGCCAACC
AACTCCTCACAGATCTCGTGGATGATAATTATTTTTATTTATTTGACCTT
AAATCTTTTTTCACGGCAAAGGCACTTAATGTTGCAATACCGGGTGGTCC
CAAATATGAGCCTCTTATCAAAGATCCTACACAGTTGGACGATGACTGGA
ATGAGTTCAATGACATCAATAAAATCATCATTCGACAACCCATTCGAACA
GAGTATAGGATTGCATTTCCATATCTATACAACAACTTACCCCATTTTGT
ACATCTCTCTTGGTGAGTGTTCTCCCTTTTATATAACTTGGGAATATTGT
TTTTATTTAATGATGATTTGCGCGCAGGGGTATTGAACCTGGATCAACAT
GTAGATCAGCTCCTCTTTAGAAATAGTAATTAGTTGAGTCCGAGACTCCT
GTTATAATTATTAATGAGGAGTAAAAATATGCACTAACTGATTCATTGCA
AAACTTATATATATTCTTTGGTCATAGTTTCATTTTAAATGTATTCAAAG
TATCTCTTTTATTTATACTTAAGGTACCATACACCCAATGTTGTATTCAT
CAAAACCGAAGATCCGGATCTACCTGCTATTTTATTTTGATCCTCTCATC
AATCCCATTTCTCATAGACATTCTATTTCTAATCAAAATAAGCTTGAAAG
CTTGCTCCCCGAGGATGATGAAGAATTTGAGATCCCGGAAGAGTGTCAAC
CTTTTCTCTTAGATTGCCCTCTATACAGTGATAATACTGCTAACGGTGTC
TCACTACTTTGGGCCCCAAGACCCTTTGATACTCGATCTGGTAGAACTCG
CCGTGCTCTTGATATTCCTTTAGTCAAAAATTGGTATCGAGAGCATTGCC
CTCCTGGCCAACCCGTTAAAGTACGTGTAAGCTATCAAAAACTACTCAAG
TACTATGTTTTAAATGCACTTCACCATCGACCCCCAAAGCCTCAAAAGAA
GAGAAATTTGTTCCGTTCATTTAAAGCTACCAAATTTTTCCAATCAACAA
GTTTAGATTGGGTTGAAGTTGGGTTACAAGTCTGTCGACAAGGATACAAC
ATGCTCAATCTTTTAATTCATCGAAAGAACTTGAATTATCTTCATTTAGA
TTATAATTTTAATCTTAAGCCAGTTAAAACTCTTACCACTAAGGAGCGTA
AAAAATCGAGATTTGGAAATGCTTTCCATTTGTGTCGTGAGATTCTTCGA
TTGACCAAATTGATTGTTGACGCTCATGTGCAATATCGACTCAATAATGT
GGATGCTTTTCAACTTTCTGATGGTATTCAATATATTTTTGCTCACGTTG
GTCAACTGACGGGAATGTATCGGTACAAATATAAGCTAATGAAGCAAATT
CGGATGTGCAAGGACTTGAAGCATGTTATATATTATCGTTTCAATACTGT
AAGTTTATTTCCCCTTTTATTTTTTAATTGATTGATGTATTTCAATATTT
TTGTCCTTGTTAGGGACCTGTAGGTAAAGGACCTGGATGTGGTTTTTGGG
CTCCTGGATGGAGAGTATGGCTATTCTTCATGAGAGGMGTCACGCCTCTT
CTTGAGAGATGGTTAGGAAATTTACTTTCTCGTCAATTTGAAGGTCGTCA
TTCCAAGGGAGTTGCTAAAACTGTTACAAAACAAAGAGTAGAGTCTCACT
TTGATCTCGAACTTCGTGCCTCGGTCATGCACGACATCATTGATATGATG
CCTGAAGGAATTAAGCAAAATAAAGCAAGAACCATTCTTCAACATTTATC
TGAAGCATGGAGATGCTGGAAGGCTAACATTCCTTGGAAAGTACCAGGCC
TACCTACCCCTATTGAAAATATGATCTTAAGATACATTAAAATGAAGGCT
GATTGGTGGACAAATACGGCACATTATAATAGAGAACGTATACGCCGTGG
AGCGACAGTTGACAAGACAGTATGTAAAAAAAATCTTGGTCGTCTTACTA
GGCTTTACTTGAAAGCAGAACAAGAACGGCAACATAATTATTTGAAGGAT
GGTCCTTACATTTCTCCCGAGGAAGCCGTTGCGATATATACAACTACTGT
TCATTGGCTCSKGTCTCGGGCATTTGCTCCKATACCCTTTCCTCCTCTTT
CTTATAAACACGACACAAAACTTCTTATCCTTGCATTGGAGCAATTGAAA
GAAGCTTATTCGGTCAAGTCAAGACTTAACCAAAGTCAAAGAGAGGAGTT
GGGTCTTATAGAACAGGCCTATGACAATCCGCATGAAGCATTATCTCGTA
TTAAGCGTCATTTGTTAACGCAAAGAGCCTTTAAGGAAGTGGGGATTGAA
TTTATGGACTTGTATTCTCATTTAATTCCTGTATATGATGTTGAACCACT
AGAAAAGATCACGGATGCATATTTAGATCAATATCTTTGGTATGAATCCG
ATAAACGAAGACTATTCCCACCGTGGATCAAACCCGCTGACACCGAGCCA
CCTCCATTGCTTACCTACAAATGGTGTCAAGGCATCAATAATCTTCAAGA
TGTTTGGGAGTCCGCGGATGGTGAGTGTAACGTTATGATGGAATGCAAAC
TCGAGAAACTTTATGAAAAAATTGATTTGACTCTTCTCAATCGACTTCTT
CGTTTAATTGTGGATCACAACATTGCTGACTACATGACGGCTAAAAATAA
CGTAGTTGTTAATTATAAGGATATGAATCACACCAACTCCTATGGTATTA
TCCGAGGTCTTCAATTTGCCTCCTTTGTTGTACAATATTTTGGTCTTGTC
AATGATTTATTGATATTAGGTCTTAATCGTGCAGCAGAAATGGCTGGACC
TCCTAAAATGCCAAACGAATTTCTCACATTTCAAAATATTGAAACTGAGT
CTTCTCATCCAATTAGGCTATTTTCTAGATATGTCGACAAAATTCACATG
TTCTTCCGCTTTTCATCAGAGGAGGCTCGGGATTTAATTCAGAGATATTT
AACAGAACATCCGGATCCCAACAATGAAAACATAGTTGGATATAATAACA
AAAAATGTTGGCCCAGAGACTCAAGAATGAGATTAATGAAACACGACGTA
AATCTTGGGCGTGCTGTATTTTGGGATATCAAGAATCGTCTCCCTCGAAG
TGTAACTACGATTGAATGGGAATCTTCGTTTGTCTCCGTATACTCAAAGG
ACAATCCTAATTTGTTGTTCTCAATGTCAGGCTTTGAATGTCGAATTTTA
CCCAAGATTCGGACATCTCATGAAGAATTTACTCATCGTGATGGTGTGTG
GAATCTTCAAAACGAGGTCACGAAAGAAAGGACGGCCCAATGTTTCCTTC
GAGTTGATAATGATGCAATGGCTAAATTTCACAACCGTGTACGACAAATC
CTCATGGCATCTGGTTCTACTACATTTACCAAAATTGTTAATAAATGGAA
TACTGCTTTAATTGGATTGATGACTTATTTCAGAGAGGCAGTTGTGAATA
CACAAGAGTTATTAGACTTGCTCGTCAAATGTGAAAACAAGATTCAAACT
CGTATCAAAATTGGTCTCAACTCTAAAATGCCCTCAAGGTTTCCTCCTGT
TGTGTTTTATACGCCTAAGGAATTGGGTGGCTTAGGAATGTTGTCCATGG
GTCACGTTCTTATTCCTCAGTCAGATTTGAGATGGTCAAAACAAACTGAT
GTTGGAATCACGCATTTCCGTTCAGGTATGAGCCACGAAGAGGATCAACT
TATTCCTAATTTGTATCGTTATATACAACCTTGGGAGGCTGAGTTCATAG
ATTCTCAGAGAGTTTGGGCAGAATATGCATTAAAACGACAGGAAGCTGCA
GCTCAGAATAGAAAAATAACGCTCGAGGATCTTGAAGACTCTTGGGATCG
TGGTATTCCACGTATTAGTACCTTGTTCCAAAAAGATCGACATACTCTAG
CTTATGATAAAGGATGGAGAGTAAGGACTGAGTTTAAGGCATATCAGGTT
CTTAAACAAAATCCTTTTTGGTGGACTCATCAACGGCATGATGGTAAACT
ATGGAATTTAAACAACTATCGTACGGATATGATTCAAGCTCTTGGAGGTG
TTGAAGGTATTTTGGAGCATACACTTTTCAAGGGAACTTATTTCCCTACA
TGGGAAGGTCTTTTCTGGGAAAAAGCGTCAGGATTTGAGGAATCAATGAA
GTACAAGAAACTTACCAATGCACAAAGATCTGGTTTGAATCAAATTCCAA
ATCGTCGATTTACTCTCTGGTGGTCTCCCACTATAAACAGAGCTAATGTC
TACGTTGGTTTCCAAGTACAATTGGATTTAACTGGCATTTTTATGCACGG
CAAAATTCCTACATTGAAAATATCCTTGATTCAAATTTTCAGGGCTCATT
TATGGCAAAAAGTACATGAGTCTGTCGTTATGGATCTGTGTCAGGTTTTT
GATCAGGAATTGGATGCACTTGAAATTGAAACAGTTCAAAAGGAAACCAT
TCACCCTCGTAAGTCATACAAAATGAATTCCTCATGTGCAGATATATTAT
TATTTGCTGCATATAAATGGAATGTTTCTAAGCCTTCTTTATTGGCGGYT
ACAAAAYATACAATGGATTRCACGACGACTCAAAAGTTTTGGCTTGATGT
GCAATTACGTTGGGGAGACTACGATTCTCATGATGTTGAGCGATACGCTC
GAGCCAAATTCTTGGATTACACTACAGATAACATGTCAATATATCCCTCA
CCTACTGGAGTATTGATCTCTATTGATTTGGCTTATAATTTACACTCTGC
TTTTGGAAATTGGTTCCCAGGTTGTAAACCTCTAATACAACAGGCAATGG
CTAAAATTATGAAGGCTAATCCTGCCTTATATGTGTTGAGAGAGCGTATT
AGAAAAGGTCTTCAGCTCTACTCATCCGAACCAACTGAGCCTTACCTTTC
TTCGCAAAATTATGGTGAACTATTCTCTAATCAAATTATTTGGTTTGTTG
ACGATACCAATGTATATCGTGTCACAATTCACAAAACATTTGAAGGCAAT
CTCACAACTAAACCTATTAATGGCGCTATCTTTATTTTTAATCCTAGAAC
AGGGCAACTATACTTAAAAATCATTCATACTTCCGTATGGGCTGGTCAAA
AGCGTTTAGGTCAGCTCGCCAAGTGGAAAACTGCAGAAGAAGTTGCTGCA
TTGATTCGATCTCTACCCGTCGAGGAACAACCAAAACAAATCATTGTCAC
GCGTAAGGGAATGTTGGATCCCTTGGAGGTCCATTTATTGGATTTCCCTA
ACATTGTCATTAAAGGCTCCGAATTACAATTGCCATTCCAAGCCTGTCTT
AAAGTAGAAAAATTTGGTGATTTGATTCTTAAGGCTACTGAACCCCAAAT
GGTACTTTTTAATCTGTATGATGATTGGCTTAGAACCATATCTTCTTATA
CTGCATTCTCTCGTCTTATATTAATACTTCGAGCCCTCCATGTAAATAAT
GATAGAACCAAAATTATCATTAAACCTGATAAAACCACTATTACTGAAGC
TCACCACATCTGGCCATCTCTTTCAGATGATGAATGGATCAAAGTAGAAG
TTGCATTGAAGGACTTAATTCTCGCTGATTACGGAAAGAAAAATAATGTT
AACGTAGCTAGTCTTACTCAATCCGAAATCCGGGATATTATTTTGGGTAT
GGAGATCTCTGCACCCTCGGCACAGCGTCAACAAATCGCTGAAATTGAAA
AACAAACAAAGGAGCAGTCACAACTCACTGCTACCACAACTCGTACAGTT
AACAAACACGGAGATGAAATTATAACTTCTACCACTTCGAATTACGAGAC
AAATACGTTTAGTTCCAAGACAGAATGGAGGGTGAGAGCAATCTCTGCGA
CAAATCTTCATCTGAGAACAAATCATATCTATGTATCATCAGACGATATC
AAGGAAACGGGTTATACTTATATTCTACCGAAGAATGTCTTGAAGAAATT
TGTAATGATTTCTGATTTGAGAACTCAGATTAGTGCATATCTATACGGAA
TATCCCCTCCCGATAATCCTCAAGTCAAAGAAATTCGATGCTTGGTTCTT
GCTCCTCAATGGGGTACACATCAAACCGTGCATTTACCCTCTATGCTTCC
TCAGCATGAGTATTTGAAGGAACTTGAGCCATTAGGATGGATTCACACCC
AGCCTAACGAATTGCCGCAATTATCACCACAAGATATATCTACTCATTCT
CGTGTTATGAGTGAGCACACTTCTTGGGATGGTGAAAAGACAATTGTCAT
TACTTGCTCATTCACCCCTGGATCATGCTCTCTAACTGCTTACAAATTAA
CACCGAGTGGGTTTGAATGGGGTAAAAATAATACTGACAAAGGAAACAAM
CCTAAGGGTTATTTACCGAGTCATTATGAAAAGGTTCAAATGCTGTTATC
CGATCGGTCCTTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAACTTTATGGG
CGTTTCGACATGAGCCTTTCTATGAAATCGAACTTAGTCTTGCAAATCCA
AAAGAGTTCTATCATGAAGTTCACCGGCCATCTCATTTTATGAACTTTGC
ATCCTTCGAAGAGGGAGTAGATTGGAACGGTGCAGACAGAGAAGATATGT
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