EMLSAT00000004400, EMLSAT00000004400-700247 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004400
Unique NameEMLSAT00000004400-700247
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s231supercontigLSalAtl2s231:1022896..1025235 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004400 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004400EMLSAG00000004400-687166Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019191EMLSAE00000019191-728119Lepeophtheirus salmonisexon
EMLSAE00000019192EMLSAE00000019192-728120Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780273auto780273Lepeophtheirus salmonispolypeptide
EMLSAP00000004400EMLSAP00000004400Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004400

>EMLSAP00000004400 ID=EMLSAP00000004400|Name=EMLSAP00000004400|organism=Lepeophtheirus salmonis|type=polypeptide|length=493bp
MGEVAGYYEDKSIFITGATGFMGKVLLCKLLRCCSDLSRIYVLIRPKRGL
DPHQRLAKLMDAHIFKDLSEQNKSKVVLVEGDVTQPRLGLCQEDIDTILL
NVNVFFHSAATVKFDEDLTLSVQMNVAGTLSALELASKIKDLKAFVHVST
AYCNPHVNHLEEKVYHKDMPYSPREIIDLLMNGWPXSYTFTKAIAEKAIL
QYSHILPVAXMRPSIVAASWKDPIPGWIDNLNGPTGVLVGASTGILQSMY
IDVDCIADVVPVDICINLLTVIPYYLSKLNNINNNSAISGGETTNSYPLP
VFNCTTGTLNPINWKTIESLCHKYAKKYPYQKRFWYITGSFKTNKVYDRI
CQVLFHHIPSFIGDGIRVIFGYKPIFRPLICRMTAAFPSLEYFACKSWLF
SSTEIERILSELSTEDKAVFGFDVKDVIWEEFLSNYVLGARHFVMKEDPS
TLDESRVKLKYFKYMHIFFKILFWFFAFQLIAYIFVSFYGMIF
back to top

mRNA from alignment at LSalAtl2s231:1022896..1025235+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004400-700247 ID=EMLSAT00000004400-700247|Name=EMLSAT00000004400|organism=Lepeophtheirus salmonis|type=mRNA|length=2340bp|location=Sequence derived from alignment at LSalAtl2s231:1022896..1025235+ (Lepeophtheirus salmonis)
TCCAAGCTCTTAGGAAGATCAAGAATGGGTGAAGTAGCTGGTTATTACGA
GGACAAAAGTATATTCATCACAGGAGCCACGGGTTTTATGGGAAAAGTTC
TTTTGTGCAAACTTTTGAGATGTTGTTCGGACCTGAGCCGAATTTATGTT
CTTATTCGACCCAAACGAGGTTTAGATCCACATCAACGCCTTGCTAAACT
CATGGATGCTCACATTTTTAAGGATTTAAGCGAACAAAATAAAAGTAAGG
TTGTTCTGGTGGAGGGAGATGTCACTCAGCCAAGACTTGGATTGTGTCAA
GAGGATATCGACACCATTCTCTTAAATGTGAATGTTTTCTTTCATTCTGC
TGCAACTGTTAAGTTTGATGAGGATTTGACGCTCTCTGTACAAATGAACG
TTGCAGGAACACTTTCTGCTCTGGAGTTGGCTTCTAAAATCAAAGACCTA
AAGGCATTCGTCCACGTTTCCACGGCGTACTGCAATCCGCATGTGAACCA
TTTGGAGGAAAAGGTCTATCATAAGGACATGCCTTATTCTCCTAGGGAGA
TCATCGATTTAGTGAGGGAGAAAGGAGATGTTTTGAATGAGAAGAATATT
ACTAAGGAGGTAAGAAGAGTTTTGTTCTATTATCTATTCATTTGTAACTA
AATTATACAATCGAAAGAGAACTACATAGAGGTGACAAGATACACACATG
ATTGAGCAAGGATGTCAACTGACACAAACATCAAAAAAATATTTTTCGGA
TTTCAAGACCATTTTTTTTTCTTACACTATCAGGCTAAGAACTTCATTAA
TATGATAATTAAAGATAGTTTTGATATTCAATTCTGACAGACGGATTATG
TAATACAAAGTTAATCAATCAATTTTTTTTAAGTTGACGTTTAAGTTCTA
AATTATAATAATACCTAGAGATAAAATATATTACTATTTTACCAGTATAA
TTATACACACAAGTTTAATTCGTTCCTGTACTGAATTCTTTAGTCAAAAC
AAGTTAACACCACCAATTTTCTCTCCTTTGATTTGATTTAGTTTTTAATG
TTGCTATTATTCCATTGAATGTCTTAACATTTTGAACCTTTTATATATTC
CAGCTCATGAATGGCTGGCCAAAWAGTTATACATTTACTAAAGCTATTGC
TGAAAAGGCTATTCTCCAATATTCCCATATTCTTCCAGTGGCTAWTATGA
GACCCTCTATCGTTGCTGCGTCTTGGAAAGATCCTATTCCAGGATGGATA
GACAATTTAAATGGACCCACAGGCGTGCTTGTAGGAGCCTCCACTGGCAT
CCTTCAATCCATGTATATTGATGTGGACTGTATAGCTGACGTTGTCCCTG
TGGACATCTGTATCAATCTATTAACAGTTATACCATATTATTTATCTAAA
TTAAATAACATCAACAATAATTCCGCAATAAGTGGAGGTGAGACGACGAA
TTCATATCCTCTTCCTGTTTTTAATTGCACCACAGGAACGTTAAATCCGA
TCAATTGGAAAACTATTGAATCCCTTTGTCACAAATATGCCAAGAAATAC
CCTTACCAAAAAAGATTTTGGTATATTACAGGTAGTTTTAAAACAAATAA
AGTATACGATCGCATCTGTCAAGTTCTCTTTCATCACATTCCGTCCTTTA
TTGGAGATGGAATAAGAGTTATTTTTGGTTACAAACCTATTTTTCGACCA
TTGATCTGTCGAATGACAGCTGCATTTCCTTCCCTCGAGTATTTTGCATG
TAAGAGCTGGTTATTTTCTAGCACTGAGATCGAGAGAATTCTAAGCGAAC
TAAGTACTGAGGACAAAGCTGTTTTTGGATTCGATGTAAAAGATGTCATT
TGGGAGGAATTTTTGTCCAACTACGTTCTGGGTGCAAGACATTTTGTTAT
GAAGGAGGATCCATCTACTTTAGACGAGTCTCGAGTGAAACTCAAATATT
TTAAATACATGCATATATTTTTCAAAATTTTATTTTGGTTTTTTGCTTTT
CAATTAATTGCCTATATATTTGTATCCTTTTATGGTATGATTTTTTAGTT
CTTAGATAACGAATTTATATATAACAACACATGTATACTCTTGACATTTG
AGAATCTTTTAAGTATGCTTTAATTATCTCATATATTTATGGGTTTTTTC
ATTTTAGTACAGATGATGAATTGAATATCCAGTTTGATATATTTAATTTT
ATAAACAAATAGTCCAATATGGTCTGTTTTTTTCTAGTTCGAAGTAATTA
GTGATTTCTTTTTTTTTTAATTCTCAATTATTTTTATTTATTTATATTTT
GTAAGATATTTCAAAACGAAATAAATCCATTGATATCATG
back to top
Add to Basket