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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s231 | supercontig | LSalAtl2s231:1229356..1237420 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004417 >EMLSAP00000004417 ID=EMLSAP00000004417|Name=EMLSAP00000004417|organism=Lepeophtheirus salmonis|type=polypeptide|length=816bp
MSDPRSPSPPVPGPPSGARGVENLAEVFRCFICMEKLRNAHLCPHCSKLC
CYLCIRRWLTEQRSQCPHCRASLHLHELVNCRWVEEVTNQLDSLVSSKGN
GIGGDGSSSEPDTLENCHVHPDEKLSVYCKTCSTCICHQCALWGGTSHSG
HTFKPLDEVYTHQALQLKVEVTMLRRRLLELLSFEQEAXRTVEAXRAAKD
DRXREIRNTVELMIARLDSQLKGKLLSIMGQKNSLSQETEQVQNLLSEID
CYLNSKNKSEFITKSSDLLALVTEISKKPVVRVCMNGFSNGGGEFISEIV
PQYSSAVFRLNNFSALQTKAHPVYSPPLNINGLSWRLKVYPNGNGVVRGN
YLSVFLELSAGLPESSKYEYRVEMIYQGSRDSSKNVVREFSSDFEVGECW
GYNRFFRLDLLASEGYLNVEADVLVLRFEVRPPTYFQQCRDQQWYIHQLQ
SLQAGYAAQIAELNDRLSLMMSRSRSPIFQSPVDFIPVTSSKPRTDRSTS
AIDSIISNVRKRCSMHPYASKNPSLTTSKVGVSSIASNGANRNLSPSANA
TLYNLGISSSELECGNLSSSSESEDSCEETEPVEEQSLEDVEAENDVDDE
TISVENDLDLNISHPSLLSDLDSLTDQVEGMGYLAAVASLGEHGGRSRSV
EVPSSGGEQAPRPSIGMTSNDIGSSPVRDQKDYQPYSILNIYPKPFFNYP
GLSTNSTSSSVLTNNPNNVESSSVGGLSNIHNPLLQNMDMAXXXQPBRLL
GNIFXCSSQTGSGHFNSDPSDQPSSDVVVARMPRLQSPNSSTNMDLSTCV
DKDDAIKPKDNGRPSS back to topmRNA from alignment at LSalAtl2s231:1229356..1237420+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004417-700264 ID=EMLSAT00000004417-700264|Name=EMLSAT00000004417|organism=Lepeophtheirus salmonis|type=mRNA|length=8065bp|location=Sequence derived from alignment at LSalAtl2s231:1229356..1237420+ (Lepeophtheirus salmonis)
AAAAAACAACAATACATATTCATGTTGCAACTACAAAAAGCCGCTCGCTA
CTCGATTATCATATTATTTTACTCCATGTATTCTTGGAGCAATATAACAA
TCTCCCTTTTGTATAATCTATGATTATTTAAGTTATTTATGAAGAAAAAT
GTACGAAATAACCGTTAGATGTCTCTTTAAATGTATATTTTGTTGAATTA
AAAGCCTGTCAAGAAGTAAGTAACTGAGTAGTCAGTCAAGTTTACCTAGT
CTTATAATTTAATATATTTTAATAAATAGTTAATACTATACGAATTGAAA
GGAGAGTAGAAGATTGAATATGTCAGATCCTCGAAGTCCATCTCCTCCAG
TTCCTGGTCCTCCTAGTGGAGCTAGAGGAGTTGAGAACTTGGCCGAAGTT
TTTCGTTGTTTTATATGTATGGAAAAACTTCGAAATGCACATTTGTGCCC
ACATTGTTCCAAACTATGCTGTTACCTTTGTATTCGCCGATGGCTCACCG
AGCAAAGGTCTCAGTGTCCGCACTGCCGAGCTTCATTACATTTGCATGAA
TTAGTCAATTGTAGATGGGTTGAAGAAGTGACGAATCAATTGGATTCCCT
CGTTTCGTCAAAAGGGAATGGTATAGGAGGGGATGGGAGCTCAAGTGAGC
CTGATACACTAGAGAATTGTCATGTTCATCCAGATGAAAAGCTGAGTGTC
TATTGTAAGACGTGTAGTACATGCATATGTCATCAATGTGCATTGTGGGG
TGGGACATCCCACTCTGGACATACGTTTAAACCTCTAGATGAAGTCTACA
CTCATCAAGTAATTATACATTTTGATTCTCATGAGATAATTATCTTATTT
TTTCCCCTTACGGATAGGCACTTCAATTAAAAGTAGAGGTGACGATGCTA
CGTCGMCGACTTTTAGAACTCCTATCCTTTGAACAAGAGGCTGYCAGAAC
AGTGGAGGCTGMCAGAGCTGCTAAAGATGATCGAGMGAGGGAAATTCGAA
ATACAGTTGAGCTTATGATTGCTCGCTTAGACTCCCAGCTCAAGGGAAAG
CTTTTGTCTATTATGGGCCAAAAGAATTCTCTCTCTCAAGAAACGGAGCA
AGTCCAAAACTTATTAAGTGAAATCGATTGTTATTTGAATTCCAAAAACA
AATCAGAATTTATAACAAAGTCCTCTGATTTATTAGCTCTTGTCACAGAG
ATAAGTAAAAAGCCTGTAGTTCGGGTCTGTATGAATGGCTTTTCAAACGG
GGGTGGGGAGTTTATTTCTGAGATTGTTCCTCAGTACAGCTCTGCTGTTT
TTCGACTCAATAACTTTTCTGCTCTTCAAACTAAGGCACACCCTGTTTAT
AGTCCTCCCCTTAATATAAATGGTTTATCCTGGAGACTTAAAGTCTATCC
AAATGGAAATGGAGTCGTCAGAGGAAATTATTTAAGCGTGTTTCTTGAAT
TAAGTGCTGGACTTCCAGAATCATCCAAGTATGAATACAGAGTCGAAATG
ATTTATCAAGGTTCTCGAGATTCCTCAAAGAATGTTGTTAGAGAGTTTTC
TTCTGATTTTGAAGTTGGAGAGTGTTGGGGCTATAATAGATTTTTCCGGC
TGGATCTTTTAGCTAGTGAAGGATATCTCAATGTGGAAGCGGATGTCTTA
GTTCTCAGGTATATATAATCTGAAATTAATCAAAATGTGTGTAGGCCTTA
TGCTAATATTTTATTACACCAGATTTGAAGTTCGACCTCCTACATATTTC
CAACAATGCCGCGATCAGCAATGGTACATCCATCAGCTTCAATCTCTTCA
AGGTTAATTCAACAGCATCATTTATTCGATTTATATATAAAATAATTATT
ATTTTTAACTTTTATAGCTGGATATGCTGCTCAGATTGCTGAATTAAATG
ATCGATTGTCCCTCATGATGTCCCGTTCTAGGTCTCCAATTTTTCAATCT
CCTGTGGATTTTATACCAGTGACATCCAGTAAGCCTAGGACAGATCGCTC
TACCTCTGCAATAGACTCTATCATAAGTAACGTGCGAAAAAGGTGTTCCA
TGCATCCATATGCCTCTAAAAATCCTTCTTTAACAACTTCAAAAGTGGGG
GTTTCTTCTATTGCTTCAAATGGGGCTAATCGTAATCTGTCGCCTTCTGC
AAACGCAACTTTGTACAATCTTGGAATGTAAGATGAAATCCTTTTCATGA
ATTTATTGAAATTGATTATTTTAATTATTATTAGAAGTTCTTCTGAGTTA
GAATGTGGTAATTTAAGTAGCTCATCTGAAAGTGAAGATAGTTGCGAAGA
AACTGAACCAGTAGAAGAGCAATCTCTGGAAGATGTTGAAGCTGAGAATG
ATGTCGACGATGAGACAATATCTGTAGAAAATGATTTGGATCTTAATATC
AGTCATCCATCCTTACTTTCAGACCTAGACTCATTAACAGATCAAGTAGA
AGGTATGGGCTATCTTGCAGCAGTGGCTTCACTAGGAGAACATGGAGGAA
GAAGTAGAAGCGTTGAAGTACCATCTTCGGGTGGAGAGCAAGGTATTTTA
CAGAGACTGCATGATATGCATGTTACTCGAGATGGAAGTTGTGGAAGTAG
TAAAAGAGATGATTCTCATCCCTCTCGAGAAGAAATTGATGTCCCATCTG
TATCAAGCCGGGAGAGACTCATAGGATCTCTTCAAACTGAACCTAGATGC
GGGTTATCGTCAAATCGTCGTTTGGGAGCTTCCTCCAAGTCACAGATATT
CGCTTCTCCTCTTCTACTTAGTTCTCATTCTGGTATAGCTCCAAGACCAA
GCATTGGAATGACATCAAACGATATTGGGTCATCCCCAGTTAGAGACCAA
AAAGATTATCAACCATATAGTATTTTAAACATTTATCCCAAGCCCTTTTT
TAATTATCCTGGTCTATCTACGAACTCAACTTCTTCATCAGTTCTCACTA
ATAATCCAAATAATGTTGAGAGCTCTTCAGTAGGAGGCTTATCCAATATT
CACAATCCCTTACTTCAGGTATAGCTCTTGTTTTAGATTATAAATAGAAT
TGTTAATTTCTTTCCAAGAATATGGATATGGCTGYAGMGGYTCAGCCCRA
TAGATTACTGGGGAACATATTTRCTTGTTCAAGTCAAACTGGATCTGGAC
ACTTTAATTCTGATCCAAGTGATCAGCCTTCAAGTGACGTTGTGGTTGCA
CGTATGCCACGACTTCAATCCCCTAATTCATCTACTAACATGGATCTCTC
TACTTGTGTCGACAAAGGTTCGTATGTTCAGTTAAAAAATTGAAGAATAA
TATAATTTGCTATGCATTTTAGATGATGCAATCAAACCGAAGGATAATGG
AAGGCCTTCGTCATAAAATACAAGAACCATTCTCGAATCTCTATCTTTTT
AATTTATTACATAATACATAGGGATAATTTATTATTAAATACATCTGACT
ATACTTAAATAAAGTTATACAATAAAGGTATAATAATATTTTTTAGATTC
CTAATACTTTGTTTACATTACATATAAGAGATGAGTTCAGTTTTAGATGC
ACTTTGCTCCTATTAAAGAGATCTTCAATGGACTCTGTGACTCCAGCATT
CCTAAGCGTGCCCTTTGCTTTCAGACTATTGTGGCATATAGACCAGACTA
TTTGAAAGCAAATCTCAAGGAGCTTTGAATCATTAAGCGTTGAGGCGTTT
AGAAATATGTCCCGAAGAATTAAGAGAAAATTTTTGCAGAATAACATTCT
CGCACGATTGGAGGAATGAAAGGATATGTTTCTTAAAATAGCTATCGATA
CAATATCATTCCTATTTCTCACTAATGAAAGCAGAAGGTAGTCCATTACT
CCTTGACACTTTGAAGGTACATAGATTTGACCATCTTGAAAGCTAGTTAC
CGTGAGAAGAAGGTCCAATGTAAGAATAAGGTATTTACTTCGTTTTTTCT
TAAATCCCTTCGGATCGAGGGCCTCAAAAAGTATAGGGGAACTCTTCGAA
TTTTCCCCGGTTAAAAAGTTACTTTTGTAAATCATAGAACGAATCTCTGA
ACTATTAGCAGCAATGATTATTAATATCTTTAGTGCATATATCCCTTCTT
CTGATCTATACTTAGAAGCTATGTTTACAATTCCATTAAAAAGTTGTCCA
TTAATAATTATAGAAGGATCTGTACCGGAGCAAAGAGTAATGATCAAACG
AAGAGTGTCCAAATAGCTTAAATATTTCATCAAAATGTTGGATATATTTT
CTCCTTTAAAAACAAGAATCTTTGATTCCTGACTTTGGTGGCTAAGGTTA
TTCAAGAGACGAATGAGGCTCTTGATCTCTAAACGACCCTCCTTTATCTT
GGTAAGATACCTTAAAATAGATGTAACCCATCTTTTTCTTATTTGAGAAC
CAATAGAAATGGGATGAAGACAAATTGAGGCTAGAGAATAATTGACAATT
AGAGTCAATTTTTCAGTTCTTAAAATTACGTTTTGATCCATCATATGGAA
TATAGTTATGACATTATTCAATATATCTCTTTTCAAATGAGAATACGGAT
CGTGATCGATTTCTTCATTGTTCATCATATGTGTAAAATTCATATAGACA
GTTATCCAAGATAATACATCACAGAGTACATCTTCTGACTTATGAGCAAG
CATTTGTAGCGTTGCTTCTAATAGCCCCTCTTCATATTTCTTGAAAATAT
TTGCAAGTTTATGTACAGATTCCGTATCCTTAGTATTTCTTAGAATTGTG
AGGTACCAATTGAAGCAGTTTCGTGTAAGATGGTCCACTTCTTCACCCGC
AACTTTTCTTCGAATAAACAAAGTAGACGCCAAGTGAGAATTAGCAATAA
AAAGGTATTCAACAGAAAGTGTTTGAACAGGATGTTTGATATATATGCAA
ATAAGGGAATCCAGATAGTATACGTAATCCATCAATGGGAAATTACTTGT
AATAGATTCTAAAGCTCTATCAGATAAGTCAATTGCTGTGAATGTATCTA
GTGTCTTCAATAAATTACCATCGTTGAGAGAAATACTAAGGAGAAATAGA
TTCAATCCTCCCATAAAAAGAGGAGTCATATCCAAGTCAAAAGAATGATT
TTCTAGTCTATTACTACGACTTACGCCACAACTATCCTCCACCTCTTCAC
ATTTTATTCTATGAATAGCCCCAAATGATTTCAAAAGACCAACCACAAAT
TCTTCAAAATTTGCTCTTTGTAAAAATGATGTAAGAGCAGATTCTCCATG
AATAAGAACACCAGAAACATTTTCCTTTATTGTTGGACCATAGTACATGT
TATGTCCCGTATAAAGGAGGTTTGTTAGAGTCTTGAGGGAACCATCCCGA
ACTATAAGTGCCTCTTTTTCATTCATTAATGCACTCAAACAAATTTCCCA
AATGGATACAACATCAGACAGCCTCCTTGTCAAAGAATCTGCTCCAAGTT
CAGAAAATGCGATCAAAGAGATTAATTGGAAGGTTAAGGAACGAACAATG
AAATTCTTATGAGTAAATAGAAGAATGAACCATTCCATACGGCCAAATAT
TTCAATACTTTCAAAATCTCCCTCATCCAAGGTTTTCTCGGCAATTCTTT
GAAGAGTTTTGAGCATGACAATAAGTTGTCCGGATTTAAAGTATCCCTTT
TCAGTGTGAGATTTGATACATACTTGAATATACTTGGCAACATCACAGCA
CTCTAACAAATTAAGATGATGAACTTGATTTTCGATAAGGTAAAATATCC
ATTTTAAGCTAGGACAATGTATCAACGGTTTCTCATTTATAATTCCTCGA
ATGACTAATGTAAACTTATGTTTGTGTCCAAACAACTTTAAAAAGTGAGA
AATAACTACGATCGTAGTCATAGATATATAATCCGGATTTTCTTTGACAC
TCTCCCTTAAAAGTAGTTTAAAAATAGTTTGATCCGTTTTTAAAAGCTGA
TCAATCCATGAGGAAACGTTCGAGTCAATATTATTATAATCTTGTATGAA
ATGATTCAAAATCTTCACATATATCTTAAGATCTGTTCTACTATTGGGTA
CAAGAGTAAGAAATTTTTTAAAAATACGATCATAATCTGTTGAGATAAGC
TCTTCATTGTCGTCTATAAGTTTTTGGGAGTTCATGAAATCTACTTCCTT
AAGAAATGCAACTGGAGTTTGAGAATAAATTAACTTTGATGGATTTGACA
AGTTTTCTTTTGAGAATGAAGCTGCTATCATGGTTCTTTCATCTTCTTGA
AGGACTAATCGATTATCAAAGTTTTCACTAAATTTTGTCTGTGAGGATGA
GCACATGAAGCTCAATCCCTCATAACATAAATTCCAATATACTTTCATGA
GTTTGAATCCCTTCATATTTTCGGGGGATTCTTCAAACTCATTTGTTCCA
TCATCCATGGCTTCATAATCAAATGGTAGTGTAAACTTTTTACCAATTAA
ATGATCGAGGGTAATATATTCTGCGTTCTCCACGGTATAAACATGTTTAA
AAAGCAAAAGAGCGGCAATCGTAGATAAATCTAACTGGGTTTGATCTAAT
TGAGAGAATCGTGGGGAATGTAATATAAACATACTTCTGATAATCTTAAA
CAATAACTTTGAACAATAGCTTGTTCTCAGAGAGTTATTTTTTACGAGTA
GGACTTTCATAACTTTAAGCACTATAGGAAGTAGTTCCCCTCCATATTCC
AGATTATCTTCCTTTAAAATGTTTTCCCAAATTTCGACTATTTTTTTAAA
TCCTCCACTCTCTATAAATTTAATATGAATTAAATTATCTTCAAGCAAAA
CTATCAAATGACTCAAAGATCTTTCAATCTCTAAAGAGCAAGTATCATCT
GATAGGAAAAGTGTCTCCATTACTTTGATAAACTCTCCTATACTTTTTTG
ATTTGACTCAACAATATTTCTGAAGTTAAGAATATCTTTGGTTCGTTTTA
TGAATGAATCACTGATATCACTTTCAAATATATCTGCAAATCTGGGAAGC
TTTAGGCAGGAATTTTCTTCCTGTGCAACAAAAACTTTAATGTTCGCTTG
GACAGCCTGTCTCAAATTAAGCGAATTATGAAACAATAAACGAAAATTAG
ATTCCAGAAGCTGATTTTTGTTGAGTCCTGAAAAAGTTCTCAAGTCCGAG
TCTGGATTAAGAGCATTGAGTATCATTTTTCCTAATCTTGTATCCGGATT
AGATAAGCACTCTAAATATACTATGTTAGGGACAAGTACCGTTGTAACTA
TTTGGTGCCATATCTTTTTTAATATATGCTCTGACTTTAGCAAGTAAAGT
AATATTTCTTCACATGCGATTTTAAGAGAAGAAGAAGAATCCTCATTCAT
AATGGTCTTGCAAACTTGTTCAATGACTTTGTGGCTGCTTAATAAGAAAT
ATATTTTTTTGCATGGATCAAACTTATTAAGAGCATGTGATATCCCCATA
ATATTTTGCACTAGAGAATGTAGACACAGATATATTTGAGTTTTTAAATG
GGAATTTTTAATCTTAAGGAGTTGAATGATGGGATGATGAAGCTCAGGAT
TTCCCGTATCTGAACAAAATTGAAAAAACTTAATTAGATAAAGGTGACTT
TCATGAAGAGGATAGGAAATCACAGAATGGCGGGSTGAATTGATAATATC
ATTTTGATTTAATGAACCTTTTAAGAAAGTGACGGCATGATGAATAGACC
TCAACATAGGCTTTACTTCTATATCAAAATCCTTTCTGGAATCATCATCC
AGTTGCAACAAAACATCACTGTGAAACTTAGGTTGGCTCAAGTATAATGT
AGGATCATAGATACATTCCTTTAAAATATGTTTTAATTTATTGTGAACTT
TTAAGTCAAGTGAGCTTGAGAAAATCCACCATTTAAGGCATAATCGAAGT
AGGAGAAGGTAAGCTACTCTATGAAAGCGAAAATTCATTTTGGAACTATG
ATACGTATAAATATTTGAGATTGTTCTTGAAATTTCGTTTATCCTTCCAC
CATCTTTTTTGTGGATATCGACATTTAAGAACTCTAGAAGCTTGATGAGT
TGGATTTCAAGAGTA back to top
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