EMLSAT00000004426, EMLSAT00000004426-700273 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004426
Unique NameEMLSAT00000004426-700273
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s231supercontigLSalAtl2s231:1456507..1459613 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004426 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004426EMLSAG00000004426-687192Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019274EMLSAE00000019274-728202Lepeophtheirus salmonisexon
EMLSAE00000019275EMLSAE00000019275-728203Lepeophtheirus salmonisexon
EMLSAE00000019276EMLSAE00000019276-728204Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780763auto780763Lepeophtheirus salmonispolypeptide
EMLSAP00000004426EMLSAP00000004426Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004426

>EMLSAP00000004426 ID=EMLSAP00000004426|Name=EMLSAP00000004426|organism=Lepeophtheirus salmonis|type=polypeptide|length=422bp
MSPIVKLKITYDNEQAVFFAGSKVTGHIQVIVEEKGGAKIRGVKIEWKGE
SSTHFRFKANKYSKYETILENEMYIMGSGDRSKPVIMLHEGTHAIPFSVL
LPPNIPGTFELERGKIFYQIYAKVNIPYSIFDPNTTRPFVVIKQNLILPA
ACNPLQGSIQEQVGMCCFSKGDVSAIVGLQRSGFVPGEDLHFSLHIENES
SKEISRSLVELCQYTYYFGIRRTNNRTYKRDQFNKRKQAVIGPAHKDLET
KKVWTELEFPSVKPGDTFTCADSALKLNSKLLLSNLFDCSTLMKTHYTLE
VTLVLGCLYSNKTTTIPIEIGSSYTSGAPIYNEPNIFIPAQTGPAVHLLQ
APYPYQPPTYPSGGPFPNYPSQFESQGPIMEAPQIHQPPSAPFFSPNIPX
APNLEFSPPPPYNPLPEQQKLP
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mRNA from alignment at LSalAtl2s231:1456507..1459613+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004426-700273 ID=EMLSAT00000004426-700273|Name=EMLSAT00000004426|organism=Lepeophtheirus salmonis|type=mRNA|length=3107bp|location=Sequence derived from alignment at LSalAtl2s231:1456507..1459613+ (Lepeophtheirus salmonis)
TTGAAGAATAAAAAATGATACAAACCCCCCAGTTGTTCGTCAATTCCAGA
GCCAATAAGTAATACACGAGGCATATGCTCCCCATTTCTTTTTCCTGCAG
CAAACCACAAAGCMCAGCCAATGGAATCATCTAAAACGGTCCCTGAAGGC
AATAATAGTTCATCAAGTTTTTCAATTTGACGTGTAGCAACTAATTCTTC
TTTGCTGATATTAATAGCTTCAAAAATAAAATTTCTTTGAGGACATACTT
TTTCTAATTCTTTTAAAGCCTTTCTCCCTGTAATGCGATCAGGTACATTT
TCAACAGCATCTCCAAATGCCACATTAAATAAAACAATGGACTCCTCAGG
AGAAAGAACGGAATGTAATATGTAAGCAAGATATGATGAATCTAGTCCTC
CACTAAATAAAATACCTATTTTTGAATGAGAGCATGGAGTTAGAGATGGA
AGACAATGACCACAAAAGGGAGGCTTATGCTCCACTCGTGTTAAAACAGA
GTCTCTAACAACCTGCTCAAATGTTTTAATGAGATCAGAATGTTTATGTA
TATATTGCAGAATGACTACGTCATCTCTCCATTTTTCTTCAATGGCATTA
GCGATCCACGGCAAAGAAGAGAGCTCGTTGGTTAATGAGAGTTTTATTAT
GGGGGACGATAACTTTGAATCACTTATTTCGAGAGGTAAATTACCAAAAG
GGGACGCTTCAGAAGAGACAGAAGCATCATTCCATGGAAACAGAGTCAGT
CTCTTGTAAATAATAGAGTATCGGTAAATCCCTTTGGTTGGAACTTGTAA
CCAAGGATGGGAGTCGTCTCCTACTGAAGATAAGGCAAGTAGCCCTTCTT
CATTCTGAAAAAATAACAAACTGTGTCTCCCAAAATAGTCTCTGCCAAAC
CAAATGAACTCGCCCTGAGTATACGAAAAAGCAAAAGGGCCTCGTATCTG
ATCAAAGAATTCCTGGGGTTCTAGTTTTTCCAATGTCCTGGAAATGGTTT
GTGTATCAGAATCACCATTTCTCATCTCCTCCAAACCTCCATAAGCATCC
CCATTCCATAGTAAATAGCCCCCAACATCATTACTATGAGGCTGAGGTGT
TATTTGAGAGCCTTGAAGCCAGAGAMCTCCCACCACAAGAATGATTCCAT
TGTCCAAAGAATGTATTTTAAAGAAATCCGGTCCACGACGTCGAATCCTC
TCCAGAATGGAACCATACTCATCATGGACATCCCTATAAGACTCTACTAT
CAAAAGAATACCGCACATGATGCGAGATTTTTTTATTATTCTTCAACGTC
ATTGAACTATGACGTAAGATGACGTCATGATTTATTTGTTAAAGAGCGAA
CTCTTATTAAATGCAAGCAATGTTACATCAGGGTATCCAAATTACGAACT
CTGATAGGCTGTCTGTACTACTGCTCGTATGTACTTATTTGAGGAAGAAG
AGGGGGTTCCTAATTGCAAATTCTACCTTTTATAAAGTTAGCATATAGGC
TATTATAAGTGAATGAGGTTTTGTGAGATTTACAATTTTTTATAAAAAAT
AGATATTATTACTAATAATATCTAGAGTGAGGCAATGTTTTGCATTTAGC
TTTAAAATATAATGTAAATTTATAGGCTTACAGACTCTGAAGAGAGGGAG
GAAAGTCCGAGACGCACCCAAAATTAATTTTCTAGCATTTTAGTACCCAT
CAGATTCAGTGTAGCAATGTCACCAATTGTTAAGTTAAAAATCACATACG
ATAATGAACAAGCCGTCTTCTTCGCAGGAAGCAAGGTTACGGGTCATATC
CAAGTTATTGTTGAGGAGAAAGGTGGTGCCAAGATCAGAGGTTAACAAAT
ACAATCATTTTCTCTTCTCTTGTATTCTTTTGATTTAGTCATTTATTATT
CAAATCCCTTTTAGGAGTCAAAATCGAATGGAAAGGGGAATCCTCAACAC
ATTTTAGATTTAAAGCGAATAAATACTCAAAATATGAAACAATTCTTGAA
AATGAAATGTATATTATGGGATCGGGAGACAGATCAAAGCCTGTTATAAT
GCTTCACGAAGGAACTCATGCCATTCCATTCTCAGTTTTACTACCTCCTA
ACATTCCTGGTACCTTTGAACTTGAAAGAGGAAAGATATTTTATCAAATC
TACGCTAAAGTCAATATCCCCTATTCTATATTTGACCCAAATACAACTCG
TCCATTTGTCGTTATTAAGCAAAATCTTATCTTACCAGCTGCTTGTGTAA
GTTTTAACTCACTCAAAAGTTGATTTCACTTATACTTCTTTCAGAATCCT
TTACAAGGATCTATACAAGAACAAGTTGGAATGTGTTGTTTTAGTAAGGG
AGATGTCTCTGCAATTGTTGGACTTCAACGTTCAGGATTTGTGCCCGGAG
AGGATCTGCACTTTTCACTCCATATAGAAAATGAGTCTAGCAAGGAAATA
TCAAGATCCCTTGTTGAACTATGTCAATACACTTATTACTTTGGAATAAG
ACGTACAAATAACCGAACGTATAAACGAGATCAGTTTAATAAACGGAAGC
AAGCTGTGATTGGTCCTGCTCACAAAGATCTCGAAACCAAAAAAGTATGG
ACGGAGCTTGAGTTCCCATCTGTAAAACCCGGAGATACTTTTACTTGTGC
AGATAGTGCACTAAAGTTAAATTCAAAGTTATTGCTCTCTAATTTATTTG
ATTGTTCCACCCTAATGAAAACTCATTACACACTAGAAGTTACTCTAGTC
CTTGGTTGCCTTTATTCTAACAAAACAACAACAATTCCTATTGAAATAGG
ATCCTCTTACACTTCTGGAGCACCCATTTATAATGAACCTAACATTTTTA
TTCCGGCTCAAACAGGCCCAGCCGTCCATCTTCTTCAAGCTCCTTATCCC
TATCAACCACCTACTTATCCCTCTGGAGGGCCTTTTCCTAACTATCCATC
TCAATTTGAATCACAAGGACCCATTATGGAAGCTCCTCAAATTCAYCAGC
CACCCAGTGCTCCTTTTTTTAGTCCAAATATTCCTMCAGCCCCTAATTTG
GAATTTTCTCCTCCGCCACCATATAACCCCTTGCCTGAACAGCAAAAACT
CCCCTAA
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