EMLSAT00000004498, EMLSAT00000004498-700345 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004498
Unique NameEMLSAT00000004498-700345
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2352supercontigLSalAtl2s2352:78..904 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004498 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004498EMLSAG00000004498-687264Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019572EMLSAE00000019572-728500Lepeophtheirus salmonisexon
EMLSAE00000019573EMLSAE00000019573-728501Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767780auto767780Lepeophtheirus salmonispolypeptide
EMLSAP00000004498EMLSAP00000004498Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004498

>EMLSAP00000004498 ID=EMLSAP00000004498|Name=EMLSAP00000004498|organism=Lepeophtheirus salmonis|type=polypeptide|length=243bp
MVDNEAIYDICRRNIDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL
TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNACFEPANQM
VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFK
VGINYQPLLLFLEETWLRYPELYASIAEAWARLDHKFDLXYAKRAFVHWY
VGEGMEEGEFSEAREDLAALEKDYEEXGMDSLEGEEEEDGQEY
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mRNA from alignment at LSalAtl2s2352:78..904+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004498-700345 ID=EMLSAT00000004498-700345|Name=EMLSAT00000004498|organism=Lepeophtheirus salmonis|type=mRNA|length=827bp|location=Sequence derived from alignment at LSalAtl2s2352:78..904+ (Lepeophtheirus salmonis)
GTTGCCACTGCAGTTGTTGAACCCTACAATTCTATCCTAACCACCCATAC
AACACTTGAGCATTCCGATTGTTCATTTATGGTAGACAATGAAGCTATTT
ATGACATCTGCCGCAGAAATATCGACATTGAACGCCCCACCTACACCAAT
TTGAACAGGCTCATTGGACAAATTGTCTCCTCCATTACGGCTTCCCTTCG
TTTTGATGGAGCTCTTAATGTAGATCTCACTGAGTTCCAAACTAATCTTG
TTCCTTACCCAAGAATTCATTTCCCATTGGTGACCTATGCCCCAGTCATC
TCTGCTGAAAAGGCATATCACGAGCAACTCTCCGTTTCAGAGATCACTAA
CGCTTGCTTTGAGCCTGCAAATCAAATGGTCAAATGTGATCCTAGACATG
GAAAATACATGGCATGTTGCATGCTTTACCGTGGTGACGTCGTACCTAAG
GACGTCAATGCTGCTATTGCCACCATTAAAACTAAGAGGTCCATTCAATT
TGTGGATTGGTGCCCCACTGGCTTCAAGGTTGGTATCAACTATCAACCCC
TACTGTTGTTCCTGGAGGAGACTTGGCTAAGGTACCCAGAGCTGTATGCA
TGTTGTCAAACWCTACAGCCATTGCTGAGGCTTGGGCCCGTCTTGACCAT
AAGTTTGATCTTWTGTACGCTAAGAGAGCTTTTGTACATTGGTATGTTGG
AGAAGGTATGGAAGAAGGAGAATTCTCTGAGGCTAGAGAGGATCTGGCTG
CCCTCGAGAAAGACTACGAAGAGGMAGGAATGGACTCTTTGGAGGGTGAA
GAAGAAGAAGATGGTCAAGAGTACTAA
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