EMLSAT00000004523, EMLSAT00000004523-700370 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004523
Unique NameEMLSAT00000004523-700370
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s236supercontigLSalAtl2s236:376127..378962 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004523 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004523EMLSAG00000004523-687289Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019683EMLSAE00000019683-728611Lepeophtheirus salmonisexon
EMLSAE00000019684EMLSAE00000019684-728612Lepeophtheirus salmonisexon
EMLSAE00000019685EMLSAE00000019685-728613Lepeophtheirus salmonisexon
EMLSAE00000019686EMLSAE00000019686-728614Lepeophtheirus salmonisexon
EMLSAE00000019687EMLSAE00000019687-728615Lepeophtheirus salmonisexon
EMLSAE00000019688EMLSAE00000019688-728616Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777025auto777025Lepeophtheirus salmonispolypeptide
EMLSAP00000004523EMLSAP00000004523Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004523

>EMLSAP00000004523 ID=EMLSAP00000004523|Name=EMLSAP00000004523|organism=Lepeophtheirus salmonis|type=polypeptide|length=411bp
MSLEDRSNSIDNSSGGGSQFDNAAPDSSSDRARESDAVDSTTFESPLATE
GRLDNQGRVLQTLRDPSHYEELNVIGNGAYGTVYRARNKTDDTIVALKKM
RFSLTEDGVPMAILREISLLKQLEKFEHPNIVRLLDICHGHRRDREMSLY
LVFEHVHQDLASYLENCPSPGLGSDRIKDIFFQILNGIDFLHSHRIVHRD
LKPQNLLITRDLTVKLTDFGLAXIYEFYTLLTSVVVTLWYRSPEVLMGLS
YATPVDMWSCGXIFAELFLRKPLFPGQNEMGQLAKIFEVIGTPGESEWSE
SSAVTRSNFNNFRTRDWTEVVPEIDAQGRDLIERLLCFSTNRRLTAAEAL
QHPYFTDYGFEPITLSPSSSSSRSMRTSEGTVSDRSLDSSSLSFSSHDDS
FGNMSGTSDKP
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mRNA from alignment at LSalAtl2s236:376127..378962-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004523-700370 ID=EMLSAT00000004523-700370|Name=EMLSAT00000004523|organism=Lepeophtheirus salmonis|type=mRNA|length=2836bp|location=Sequence derived from alignment at LSalAtl2s236:376127..378962- (Lepeophtheirus salmonis)
ATGAGTCTGGAGGATCGTAGTAACAGCATTGATAATAGCAGCGGCGGNGG KAGTCAATTCGATAATGCAGCTCCMGACTCTTCCTCGGATAGGGCAAGGG AAAGTGATGCGGTGGACTCTACGACTTTTGAATCTCCATTGGCAACAGAA GGACGGTTGGATAATCAAGGGAGAGTTCTTCAGACGCTGAGGGATCCCTC GCACTATGAAGAGTTGAATGTGATTGGGAATGGTAGGGAATTTGCCGCGA ATTATTAATATTTTTATATTTAAATGCTTCCGATGTGATCATGCCGAGCA TTTGGGATCCTTGTTTGTCTCTTGTCATATTCGGGAGTGCTTGCAGCTTA AAAGAACTGACAAAAGATAAACATTGCATCTCCGATCTTCTTATCTTCAA CGAAACCTTTTATTTTATGCTGTATCTCTTAATATCCATGGAATTTTAGA CCCATGGCATCCTCTATCATCTTGCTGGAGGACATTTTAAAAATCGTATT TTCTAGAATTCCATGGAACATAAAAGTTAATCAGTCGGTTTATCATTATT ATTTTTTTTACTGTATAGGTGCATATGGTACTGTGTATCGGGCTCGTAAT AAGACTGATGATACGATTGTCGCATTGAAAAAGATGCGTTTCTCCCTTAC AGAGGATGGTGTTCCCATGGCTATTCTCCGGGAGATTTCTCTCCTCAAAC AATTGGAGAAGTTTGAGCATCCAAACATTGTTCGGTAATATAATTTAAAT CAAAGTACTCTCACTCMCCCTGCCATTGTATAGTACTCCAAACTTTATAC ATATTTGAAATCTGAGACAGAATTTAATTTGTTTCATCTTTTAACACTTC TCCCATGCTTAATCTGTTTTGGTAAATAATGGTTGATAATGATCTAAAAG TAAAATGAATTTTCTTTGGTATATAAGGTAATATTGGAAATGAGTGGATT TTGTTGTGTATCGTTCAAATTCAAATACTGTTTGGATTTGAATTATTTGC CAAATTTTAAAGTAGTTATAAGGAAATGTTAAAAAAATGATTTAAAACAG TACTAAGGAGATGTGTAGACACACTTCGTACCCTCGCTGAACTTATTGAT ACACTTTAGTTGTATAATCCAACTTCTAGCTTGAAGCAGAGTAATTTATG CCTTTTAGAGAAGTATCTATTAGCTTATTTTAACTTTAATCCTCATCTTC CGATGTTATTTATCTTTTTATTCTCTAAACTCTCGCAAATACAGATTTAT TTTTTTGTGCTACGCATATGGTCATTATCATACTTTTCTTTCTGGTCCAT GGATCGATTTATTCCCTATACTAGTAGTAATTATAGCTTTCTGCCTCGTC ATTAACATTCTTACTTTTATTGAAAAGTCCAGGCTTGCAGAATGTTGTAA CACGCAGGGCTTCCTCCCTCCCTCCCTCCTTGATAGTGGCTTATACTGCT ATCCTTTTCCAGTCTTGTTGATTCTTCCAACATTCTTGACCCCCTGAAGC ATTCAACTTCTTAAGACAATGGTGTTTTTTTTGTTTTTTTCTTCAAAGAA TAGATTAGATTGGTATCTGTCCCTAAGAGATACTCGTAAAGTTTGCTATA AAATAAGAAAATTGACACTTATTACCTCATTGGAGGTGGAAAAAGGTTGG TTATCCCTTTCTTTTTCTAGACGAGGATCTTAACCATTATTTTTTTTCTT AAAAAAAAACAAGTCTTTAGTGTGAGATTTTATTGCACCGTATTTGAAGG GGTGAAGAGGGTACCACTCTCTTTTATCAACTCTAAGTTAAACTTTTTTT AATTTAAATCATTCCATTTAGTCTGTTAGACATATGCCATGGACACCGAA GAGATCGAGAAATGTCTCTTTACTTAGTTTTTGAACATGTTCATCAAGAT CTTGCCTCATATCTCGAGAATTGTCCTTCTCCTGGACTAGGATCTGATCG AATCAAGGTACTGTTAGTACTTCACCATGAAGTTATTTTTTTTAAATTCA CAATTTAATTATAGGATATATTTTTTCAAATTCTGAATGGTATTGACTTT TTGCATAGTCATCGCATAGTACATAGGGACCTGAAACCCCAGAATTTATT GATAACTCGTGATTTGACTGTTAAGTTGACTGATTTTGGATTGGCTCSTA TATACGAGTTCTACACACTTCTCACGTCTGTGGTGAGTTTTTCTATATCG AAGATTTACTAGAGTTTGTACTGATTCATTTAATTATTAGGTGGTAACAC TTTGGTACAGGAGTCCTGAAGTTCTGATGGGGCTGTCTTACGCAACTCCA GTTGATATGTGGAGTTGTGGCTGKATATTTGCTGAACTTTTTCTTAGAAA ACCCTTATTCCCCGGTCAAAACGAGATGGGACAACTTGCAAAGATTTTTG AAGTGATTGGTACTCCGGGTGAATCTGAATGGTCTGAATCATCTGCCGTT ACTCGATCCAACTTTAACAATTTTAGAACGAGAGATTGGACTGAAGTTGT GCCAGAGATAGATGCTCAAGGAAGGGATTTGATAGAGGTCAGTGTTTATA CTAGTCGTTCATTGGTTAAGGATAAATTTAATAAATATTTTTCTTGCAGA GACTTTTATGCTTTTCAACAAATCGCCGCCTCACTGCCGCTGAGGCTCTA CAGCACCCTTATTTCACTGATTATGGTTTTGAGCCAATTACGCTGTCTCC TTCTTCGTCCTCTTCAAGGTCAATGCGTACATCGGAGGGAACTGTGTCTG ACAGATCGCTGGACTCGTCGTCTTTATCGTTCTCAAGCCATGATGATTCG TTTGGTAACATGAGTGGAACTAGTGACAAACCGTAA
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