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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s238 | supercontig | LSalAtl2s238:621451..626841 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004563 >EMLSAP00000004563 ID=EMLSAP00000004563|Name=EMLSAP00000004563|organism=Lepeophtheirus salmonis|type=polypeptide|length=575bp
MGDKMQSIVDSLQKRAQYIKESLKRAPNQCESLSSLSSLGNSNSSCDRFN
SKNLVYEDFNSSRYASKSTIHLLGNEGTEGIIKYIKTKLSNFVDPRGYMN
IYWLSLQALIFLYNAWVIPLRAVFPVQVGAAVWWWIFFDYLGDFIHFLDL
VFYKRRVLYMENGFWVKNKKRITAHYVRKGSFKYDLLALLPTDLFYFWFG
TNFVILRLPRLFKAYAYWEFIERLDSVLAKPYFLRIFKTLNYMLYLIHLN
ACAYYLFSDYQGIGSKDNAFIYNGEGNAYIRRNVVSYQRKLDDISAFMND
NKVSRRMQGKVKTWMNYTWNTHKTFDENLILEFLPLKIRTDVAMRVHYKT
LSKVKLFRNCDLGLLKDLVVLLRPVTYLNGEYVCRKGDKGTEMFIIQSGQ
VHVMNKDKVLVVLKRGSVFGEIALLGIMDTMNRRTADVISIGFSTLFVLK
KIDLEKVLEDYPDAQRILNARAKKLIRENELRRGSYKIRRASIFDRKKDP
ALLSAVMRLRGKKLPRCHDAPVSRSNSLKQLHSHLSFKKHRRSKKAMILA
FFVGKMSSKLLLSNGNLSVFIKYTL back to topmRNA from alignment at LSalAtl2s238:621451..626841+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004563-700410 ID=EMLSAT00000004563-700410|Name=EMLSAT00000004563|organism=Lepeophtheirus salmonis|type=mRNA|length=5391bp|location=Sequence derived from alignment at LSalAtl2s238:621451..626841+ (Lepeophtheirus salmonis)
ATGGGGGATAAAATGCAAAGTATAGTGGACTCCTTGCAAAAAAGAGCTCA
GTACATCAAGGAGAGTTTAAAAAGAGCTCCAAATCAATGTGAAAGCCTAT
CTTCACTATCTTCATTAGGAAATTCAAACTCTAGTTGTGATCGATTCAAT
TCTAAAAACCTTGTCTACGAAGACTTTAATTCCTCACGCTATGCTTCAAA
ATCAACCATTCATCTATTGGGGAATGAAGGAACAGAAGGAATCATCAAAT
ATATAAAAACTAAATTGAGCAACTTTGTTGATCCTCGAGGTTACATGAAT
ATATACTGGCTTTCTTTACAAGCATTAATATTTTTGTATAACGCATGGGT
AATCCCATTACGAGCTGTCTTTCCTGTACAAGTGGGGGCTGCAGTTTGGT
GGTGGATCTTCTTCGACTATCTAGGGGATTTCATTCATTTTTTAGATTTA
GTGTTCTACAAGAGACGAGTCTTATATATGGAAAACGGATTTTGGGTGAA
GAATAAAAAACGAATCACGGCTCATTATGTTCGAAAGGGTAGCTTCAAAT
ATGACTTACTTGCTTTACTTCCCACGGATCTCTTTTATTTTTGGTTCGGA
ACCAATTTTGTTATTCTTAGACTTCCAAGACTTTTCAAGGCATATGCATA
CTGGGAATTTATTGAGCGGTTAGACTCAGTGCTTGCTAAGCCATATTTCT
TACGAATATTCAAAACACTCAACTACATGCTCTACCTAATACACTTAAAT
GCATGCGCCTACTATTTATTCTCGGATTATCAGGGAATTGGATCAAAGGA
CAATGCCTTCATTTACAACGGAGAGGGAAATGCCTACATTCGGTGCTTTT
ATTTTGCAACTAAAACTGCGACATCTATAGGTTACAAATTATACTCTTAA
TAATAGAAATTATTACCCATAGCAGTGATTCTCAAACTTTTTACATTGTG
CACCACTTGAGAAAATATCAAAACAATCCTTGGCATAATTTTGGATAATC
TTTTTTTTACAAAAGATAATTTTTGAAAATGTATGTATAATTTTAAAACA
AAATTTTAGTCTGGGGTGTTGTATTCCCCCTCTACTTAATCATCTGCATA
CCACAGTTTGAGAGCCACTAATCTTTACATGATAAACTATTAAATAAACC
TACCAATAGCATTGCTTATATCGTGTACAGACAGCCATCCAACAAAAAGA
TTGGGCAATCCAATGGGGCATAAGTAAACTGAAATAAATATATTCTCTGC
AAGTTGGAATGATAGTGTGTAGTTTTGGGGCGCAACATTAATAAATAAAG
AAGGTATTTTTTAAAAAATCCAAAATTTAAATTATTTGYAAAAAAAAATT
AAGATACAATTTAATAATTAAACAAAATAGAAAAAAAGGCCAGAAATCGT
CTGGTAGTTATCCAAATAAGGGGATNATTCCTGTCATTTTGGAAAGGGAC
CATAAGTTATGACTTTGTTTATTGATCAAAAAGACTATAACATGAAATAG
CCATGACGTATCTAGTGAGACTGGGGTATTGATAGCTGACAACAAAATAC
ATAATGTATTTTTGACCGACTAATTTAATAGCTGGATACTCAATAAGCAA
AGAGAAGGAGAGAGTCAACCGTCAGCTGATATTTATGTTATATCTATGTA
ATAAAACAGAACCAAGTAGTAGTAGTAGTATTTATGTAGTACTCAACAGC
TGAAAGACAAGTCGCTCCTTTTCTCCTTTTTATTCAATAGGCTGAGCCAA
CCGGTTAGCGAGATATGTCTCTTTTTAAAATCGTTACCACTAAGCTTTAA
TCACTGATTTTGATGGTCATACTTATGATTGAAGTATGATTTTGGTCACA
AATTATATGTTTTTGGGGGTGAGGAGCTTGAATTTGATGTGTTTTTTTTT
TTTTGAAGTGTAAGTTTAACTGCACACCTGGCATTTTTAAATATTTTTTT
CACATAATTCAACAAATTACATTTGTTGAAATATAATGGAAATACCCTTA
TGGAATTCTTCAGTTTTTATATAAGTATAGGATGATCCCACACAGTATTT
GGAGGGATTGATGTATAAATAACAAGTATTGCATCGGTCTAGTCCTTTCT
GATCTCACTCCCTTGGGACTGAGACTGTTCCTTAAGACCGTGGGTCTTTA
GGAATGTCAGTACTAGAACTGATTAAAAAAATGGTGAATAAAATTAAGTG
ACATCATCAAGGGCAGTACTTTATAAGTAGTTCAGGACGGAACTGGACCA
GATCGAGTATTCAATTCTAAATCAAGACCGACATAACATTACAAATAACT
GTATTTTCCATTGTTTTGGTCATCTAACTTTCGGGTTTAAAAAAAAAATC
CTTGTTCTTTGGGCAATGTAAACACTCCGTGTTTTTATAGTTATGATATA
TTAACGTAAATAATATTATTTTCTACTAGGTAAAAATAAGAAACCCAAGA
CTGTTCCAGAGATTTTGTTTATGACAGCTTCATGGCTCMTGGGTGTTTTC
ATATTTGCTATCCTAATTGGTGACATACGTGATATAGTTGGAACTGCTAG
AAGAAACGTTGTATCCTATCAGCGTAAACTTGACGACATCTCTGCCTTTA
TGAATGATAATAAAGTATCTCGTAGGATGCAAGGAAAAGTAAAAACGTGG
ATGAACTACACGTGGAATACTCACAAAACTTTTGATGAAAATCTAATTTT
AGAATTTCTGCCTCTAAAAATACGAACAGACGTTGCTATGCGTGTTCATT
ACAAGACATTAAGTAAAGTTAAGCTTTTCCGAAATTGTGACTTGGGGCTT
TTGAAAGATCTTGTGGTTCTTTTAAGACCCGTGACGTACCTGAACGGAGA
ATATGTCTGTCGCAAAGGAGATAAAGGTACAGAGATGTTCATTATTCAAT
CAGGCCAAGTACATGTAATGAACAAGGACAAAGTCCTTGTTGTCTTGAAA
AGAGGATCCGTTTTTGGGGAGATTGCACTTTTGGGTATTATGGATACAAT
GAATCGACGTACTGCGGATGTCATATCCATTGGGTTCTCAACTTTATTCG
TTCTTAAAAAAATTGATTTGGAGAAAGTATTGGAAGACTATCCGGATGCA
CAGAGAATTTTGAATGCTCGAGCAAAGAAATTAATTCGTGAGAACGAACT
GAGGAGAGGTTCATACAAAATCCGAAGAGCCTCAATATTTGATCGCAAGA
AAGATCCTGCCCTTTTATCAGCTGTGATGAGACTTCGAGGGAAAAAGTTA
CCTCGGTGTCATGATGCTCCTGTTAGTCGTTCGAATTCCCTCAAGCAATT
ACACTCTCATCTTTCTTTCAAAAAACATCGGAGATCAAAAAGTGCAGATG
AAAGACTTTTNNGAGTTTAAACTGAGACATTGCTCCTATTTCTCTGATGG
TTCAACTCCCTATTCACTTCTCAGTCGCCAAAATTCAGAAGATGAACAAG
TTTTCTTTCAATAATGATGAGATGTCTATGTCTGAGTTTCTCTTATATAT
AAAATGCAAAAAAAAAGACCAAAAAAATTATGATTTCCTTATTATGATCA
TTAATCTCATGTATGAATTACTCATTTTTTATCATTATTTTTGTAAAAAA
GTATGTCAGTTTGTAGACTTTTTTTATTCAAATAAATAAAATAATTGGTG
AGGAATTATTAGGAAGCCTCAAATTTGGTCACGTAATTTTCATCATTTAT
TTTTTACTTTAAAAGAGGCCATGATATTAGCATTTTTTGTTGGCAAAATG
TCCTCTAAGCTCTTACTTTCTAACGGAAACCTCTCTGTAAGTACCTTTAT
GACATTTTTGTTTTTTGTTGTAAAAGTATCCAATGTTTTTTGCGGAAATG
GTATTGTAAAATAGTACTAGGTATGGTGGGCTCAAATGGGTGTAATTCTA
GTTTTCTGTTCATAACTCTTCATTTTCAAAAGCTAAATGAAAATCCCTTT
AAACACTTAAGTGAAGTCCATACTATGGGCTAGGGGTATTCTCTCTGTTC
CATCTATTTTCAAAAAATTACGGGATGTGATTGGGCCTTGTTTTGGTCTT
GAGAATTAACCTTTAGAACAACTTTTCAAAATTTGGCGAGGATTGAATAA
TATCTTGTGTTGGCACATTTGCATTAAATATATTGGATTTTTTATTGATG
TATTACATAAACAATACAGCTATTGACACCACAGATCTAAATAATTTCTA
TGTTCTTTCAATATAGGTTTTAATCACATAGAGTTACATACAATCATTTA
TTATACGATTGATTTTTTCACTTGTTTGGTAAACGACCATGACAATTATC
GATAACAAATAATATGTTTTGAAAGCTTTTCTCGTTTTTGGATATGAGTA
CATAGTCATTGCAAAGCCTAACTCCCTTCTGTGTGGTATCATTTACAACA
GATAGGTTTTTATATTTTAGGACAGTATCACCTTTAATATATTACAGAAG
TAGAAGTTACAGATTTGGCAGTTATCGACCAAGTAATATACAAAGAAATG
TACATATAGTTTTGTTTTTTTGTAATTGTACAGGGGAAAAACTGGTCTTT
GGAGATATGAATTTATTTGAACTGATAGTACATAGTATCATTTTAATTAA
TTTGAGTATCGTATTTTTGCCATGCCCCCACCATTGTGAAAAGGTCTAGG
TTATGATTTTTTTGAGGTGATTCGCCAAGATAAATGAGTGTAAAACGGCA
TCATTCTGAACATTTGAGAAACTTGAAAAATTCAAGCCTTCCCATTTTCT
GCTTCATCATATCAATTTTACCAAGAAAGGTGGCCCGAAGCACATCAAAG
ATAAAATAGGCATTTTGTTAAACGTTATAAAGAGTTATGGATAAATATAC
GGAATATTAATTTTTTATTAAAATTATGAACGCAAAGTTAGCGTTTTTTG
TAATTGCGTGACATGCCTAAATATGTAGACCCCTGAATTTTTACTTGGCT
AACTTAGACCACTCTAGGAACCAGAGCTTTAAATTAAGATAATTTATAAC
ATTTTTTATTAAGTTTTGATTAGTTCAAATTGGTGCACCTGACCTTCTAC
TTTGATTAAAGTTTCCATAATTTTATTTCTTTCAAAATTAACATATTTGA
AAAGTTCGACCAATTTCTTGGGACAATCCTCTAAATCCAAAATTTCACCT
TTTTGACCTCACTTTGCCAAATGTATCTAACTTTATCTGGATGTGTTGTT
GCTATAATTGTATGTGAATTGGAGATTTAGATTTGATGAAAAGAAGTTGG
CAAAAAAGGTTTTACTAATTAATCATAATTTTCTTAGTATAGAGAAAGAT
ATTTACTTTCACTTTAACATATAAATATTCATTTGTTTACATTTATTATT
CATTTAATGTTTGTTAGGTATTCATTAAGTATACTCTATAA back to top
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