EMLSAT00000004571, EMLSAT00000004571-700418 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004571
Unique NameEMLSAT00000004571-700418
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s238supercontigLSalAtl2s238:731450..732235 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004571 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004571EMLSAG00000004571-687337Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019897EMLSAE00000019897-728825Lepeophtheirus salmonisexon
EMLSAE00000019898EMLSAE00000019898-728826Lepeophtheirus salmonisexon
EMLSAE00000019899EMLSAE00000019899-728827Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779516auto779516Lepeophtheirus salmonispolypeptide
EMLSAP00000004571EMLSAP00000004571Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004571

>EMLSAP00000004571 ID=EMLSAP00000004571|Name=EMLSAP00000004571|organism=Lepeophtheirus salmonis|type=polypeptide|length=223bp
TKSNKQHVHLTNLSLESTGTYKCEVSAEAPNFRTKSAHQDMVVVVVPESA
EIVGTRPMYFVGDTVNVTCYSYKSRPSASLSWRINGQEVTPEFEKLGDYL
HYEKNVRNRDMILSGNPYYGSSENKNDKLATKLNAKLKEYRPKVEKNNLE
TSALGLTFKVGKQYLGIGLKLECTVAIGSVYWQSFNAEIPVELREQSSVS
NSWWISSSGERPTILGASSYTFM
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mRNA from alignment at LSalAtl2s238:731450..732235-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004571-700418 ID=EMLSAT00000004571-700418|Name=EMLSAT00000004571|organism=Lepeophtheirus salmonis|type=mRNA|length=786bp|location=Sequence derived from alignment at LSalAtl2s238:731450..732235- (Lepeophtheirus salmonis)
ACCAAATCCAATAAACAACACGTGCATTTAACAAATCTAAGCCTGGAATC
CACTGGGACCTATAAATGTGAAGTGAGTGCAGAAGCACCCAATTTCCGAA
CGAAATCTGCTCATCAGGACATGGTCGTTGTTGTTGTTCCAGAGAGTGCA
GAGATTGTTGGAACACGGCCCATGTATTTCGTTGGAGATACTGTCAATGT
GACTTGCTACTCATATAAGTAAGGGCAATTTGTGTATATATAAACATATG
TTGTTCTAATGTTTCTCTTTTTAGATCACGTCCATCTGCCTCCCTCTCCT
GGAGAATCAATGGACAAGAAGTGACTCCAGAGTTTGAGAAGTTGGGTGAT
TATTTACACTACGAAAAAAATGTTAGAAATCGAGACATGATACTCTCAGG
TAATCCCTACTATGGTTCGAGTGAAAATAAAAATGATAAACTAGCTACCA
AGGTATGTATCACTCTTGAGTAAAGCTAAAATATCTACATATTTTTTTTA
AATCCATCATTAGCTCAACGCCAAATTGAAAGAGTATCGACCAAAAGTAG
AGAAAAACAACTTAGAGACCTCCGCATTAGGACTCACTTTCAAAGTTGGA
AAACAATATCTGGGGATTGGGTTGAAACTTGAGTGCACTGTTGCAATTGG
CTCAGTATATTGGCAAAGCTTCAATGCAGAAATACCTGTGGAGCTTAGAG
AACAGTCTTCTGTATCTAACTCATGGTGGATATCCTCTTCAGGAGAAAGG
CCCACAATTCTAGGAGCCTCTAGCTATACATTTATG
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