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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s238 | supercontig | LSalAtl2s238:646687..652731 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004574 >EMLSAP00000004574 ID=EMLSAP00000004574|Name=EMLSAP00000004574|organism=Lepeophtheirus salmonis|type=polypeptide|length=46bp
MIPFMNTTSSDHLYTETRDALAGGTPMAINFVFPAKGEESLIEAHK back to topmRNA from alignment at LSalAtl2s238:646687..652731+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004574-700421 ID=EMLSAT00000004574-700421|Name=EMLSAT00000004574|organism=Lepeophtheirus salmonis|type=mRNA|length=6045bp|location=Sequence derived from alignment at LSalAtl2s238:646687..652731+ (Lepeophtheirus salmonis)
CTCTTCATCTAGAGAACTCTCAAAGTCGACTTATTATTAAAGGAGGTGAT
GTTGTCAATGAAGATGGAATATTCTGTGCGGATGTGTATATTGAGGATCG
GTAGGKAACATATGTCCATGGAAAATTAACATTTTTTATTTTTTTTCCTC
CAATTTATAAAAAATTTAGTAGGTCAAATACACTATTATTTGGAAGCTCA
AAAATTGAAATTTCATATCTGTAACTCAATCCAGCTTTGAGTGCTGATGA
ATTTGATCCCAAATTGTCTTGAATACCCCTATGTTTGTGATTCTAATTCG
TAAACTACTCATCTGATGTGTGCATATAAAACATTATTTGATAGCTATTG
AGTTATGCAACAAAATATTTGACACAATTTTTTTCATTTTGTTATAAAAA
AAGTATGGTTGACCTTGGACATATTTTATTATCTTAAAATATCAAACATA
ACTTATATTTATGGTTTAAAGCTATATAATATGTCTCGTTTGTTTGTGAG
AGGCATATTGGTTAGAAGKATTTTGTGTCTTTGGCGRTTTCTTGCTATTA
CAAACATGCATCAAAGAATTTGCATAAAATTTTGTGTAACAAATGAAATT
AAGTGCTCCAAAAGAGTTGAAATGTTGACAGTGGCATATGGTGAAACTGT
TCTGAGTAAAAAAAATAAAAATAAAGAAACTTATTATTGACGGCAAAAGT
ATAACAGAATCCAAATCAATTCTGAAACTATTTTATAATAATTTCCAGAA
TATCATTGGATGCCCCAGGGATTATTTTTCTTGATCTAAAAAAGTAGAGT
CTTACTCTGAGTTCTCGTATGAAAATATTTTACTTTACATAAACCATTTT
TATAAAGATAATAAAGCATCTGTCCCCGACAACATTAAATGAAAAAATTT
TACCCTATGTTCTAACACCAAAGTCATCTCTTAAAATTTGGAGAGGAGAT
TGAACTTAAAGGAAAACTTCCTCAAGCACTAACTCGTGGAAGAATTTCAT
TGATTCCAAAGAAGAATGATGGAACGAGCTTAGACCATTGGATACCTTTA
TTTATATTAAACAAAGCCTATCGAATAATGGCTGGKATCTTAGCTAGGCA
AAWAGAACTGATTTTAAATAAACGTTTATGTACGGAGCTAAACGGTTTTT
TAAGAGGGAGACGTATCTCAGATATTTCTAGGAATATTCAGACTGCAATA
GAGTCAACTAGGAAAAGGAAGAAGTTTGGAGCGATAATAGAAGTGGATAT
CTATAAAGCAGTTGACTCTATCCATCACAATTTTATCTTAAAAGCCGTTA
AGAAATATCTCCCAAGACGGTTATTTAACCCAATTCGAGGTCTTCTTTAT
AACGAGAGGAGGATCCACTCTTTCCATAGACAGACTTAATAGTAACCCCA
TATTGTTGAGGAAAAGTTACTGACAGGGATGCCCCGTTTCTCCATTACTT
TTTGTTGCTGCTATGGAGCAAATGAGCTGTGTACTGTTACGGAAGTATGG
GGAATTGGGYATTTGCTTTGCTGGAAAGAAACACCTGTTGGATCTATATG
CTAACGACATACCTCTTATAATGGAAGGAAATTCAGTTGGGAAGATAAAT
AAGAGAATCCAGACTCTACTATCTTTTTTTAACAGATTCCATAAAATTTA
TGGAATGAAAATTAATTTCGAGTAAACGTCTATTTTGCCCTTAGGTCTTT
GGTGGTCTCCTTTGATTCCTTCAACTAAAATAAACAGTTGTAGCGTCGTG
GAGAGGATAAATATATTGGGCATTAAGTGGCAGAGTAATGAAGCTTCAGA
TATCAATTGGAACATTCTGCTCTGGCAAGCACGAAAATGGTGTAAAAACC
TGGAGAACTCTAAGGCTTCAGAATAGGGTAGACCTATACAATACTAAACT
AATCTCTCAAATGACATATGTCACAGCTGCACTCCCATCGATCGGAGAGA
GAGCTATCAAGGAAGAAGAAAACAGGCTTAACACTTTATTTAGTCGTAAA
TATCTTACAGCGCTGAAAAGACCTCGTTCGCAGTTAGTGGTTGTGTAGGA
TTGTCCTTATTAGAAAATATTTTACCTAGAATATACATAATTTTATATAT
ATATATATATTTACTAAACCTAGCGTGGAATGGAGGAATTTTATTTATGA
ATGGCATCATGATTTTGATTTGCTCAAAAGTAGCATAACTGGTTACAAAT
CATGGTTATATTGTTATGATATCAAAACCAAAGTCCAATCGTCCAAATGG
AAGAGCCCAGGTGAACCAAGACCAAAAAAAGTACAACAAGTACGATCAAA
TGTCAACATTTTGCTGACTGTTTTATTTAATGACTGATSTTATTATATAT
TCATACGGTCAATAAATAGTATTATCTTCAAGTTATGCTCCGCTTGAGAG
AACCAATACGAAGAAAACGTCTGGAATTGTGGAAAAACAATTAATGGCTT
TTGTATTATGATAATGCCGCTCCTCACTCATCTTTGCATGTGAGAGATTG
TTTGGCCAAAAACAACAGCACAAGCATGCCTCMCCCACCATATTCACTGG
ATTTGGCCCCTTGTTACTTTTTCCTGTTCCCAAAACTGAAGATATGTACC
TAAAAAGAACCCATGGGAAAAAATTGCCGAACAACCAAAATACTTTTAAT
CATTATGCATTTTACAAACAAACTATATAGCGTTAAACAACCATTATATG
TTCGTTTTTGAACGTACTAACATAAAATTCTAGTATAACAAATATATGTT
CCCCGCAAATTTTGAAAAGTCACCTTACTTTTCGAACACACCCCATATAT
ATAAAATTATATAATAAAATTTCACATATAATAGATATTAGAAGTGTAAT
GCTTACAAAGTTAACCAAATCTTATGAGTTGAATCCTATACACGTGGTTA
TTATTAGAAGTCCTTAATCATTTAAAGCTAACTTCTTAATTAAGCCATCG
GTTGTATTAATATTACAAAACCCAAAAATAATTAACCCCTTCGGCACAAT
ATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTATTTAATATAGTGTGAAA
CTTTCARGGTGATACGAAATTTTTTATTGATATATATATTTTTTTTAAAC
AAAGGGACGTGGGTGTCCCTATTATCCTGAAGTGTAAAATCCGTTAGGGG
TAACTAAATTTATTAATATAGTTATATTTTTCTTTGTCTCTTGAAACGCA
GTAGAAATTTTTGATTTTTCTTTATCTTTGGAAGCGTAGTAGAAATTTGT
GATATTATTAATATCATTAGTATTGTCAAACTAGCAAAGATGTCAAGGAG
TGTAGTAAAAACGATTGGAAAATAGTATATTTATATAGATGGTGAAAAAG
ACAGTGTAGAGTTATTTGCATTGATCGATCAAATTGACAGTAAAACAAAA
AGAGAAGTGCATAATCTTTTAGAAGATTCTTATACATAATATCTGGCGGC
AGAAGAACCTATTTCCTAGCTCTTTCGAATTATAACTGTCAACAAACAAA
CCTTTATTCTCTCCAAAATGGTAGAGAGTTTGTAACAAATGTAGAAGAAA
TCCGCCCCCATCTGGGAATTCATCTCATGATATCAGTGATGAAGCTTCCT
AATTTGAAGTCGTATTGGAACTTTGATAATTTTATATCATCTGAGGGTAT
CCAAAATGCCATGACCAGAACTCGATTTATGTTTTTTTCCAAAAACTTTC
ACTTTGGTAGTAACTTAGAGGCAAATAAATCGGACAAATGCTGACAAAAT
TAGAGGTTATCGACCATTTAAATGAAGCATTTTAATCTGCCATGTCCGAT
GCGCCAGAACAGTCGATTGATGAACACATGACTAAATTCAATGGAAAAAT
GTGCTGCAAACAATATATGAAGAATAAACCTATAAAATGGGGATTCAAAT
GGTGGTATAGGTGTTGCAGCAAAACAGGATATAGGTATTTATGAGTTTAA
TTTATACTTTGGGAAGAAAGAAAATAATGAATATTGTCTTGGAGAAAGTG
TTGTGCTTGGACTGTCTCAAAAGCTCAAGAATGTACAATATATTTCAATA
ATTCCTTCAATTCTCCCTAATTAGTTAATAAATTACAAGAAAATGGATTA
TACTGTATCGGAACTGTAAGAAAAGATAGAAAAAAATACAACTCTGGTAT
GGGAGGTGTTAATATTCTGGATCAAAAGACTACTACTTATATGTTGGGTC
GAAAATCATCGGGGGGGGGTCGTTATTTTTGAGGCTTGTTTTTTATCTCT
TGGATATTTGTGTAGTTCATTCGCACATTGTTTACAAAAAAAAATAATCC
AAAAGGAATGGAATTATTGGATTTTAAAATTATCCTTCATCAATCTATTC
CACTCCACCTACCAACAATTATATCGACGAGAGGGAAATGTAGAAATTGT
AATAGGTAATAAAAAAAATAGAGAATAAAACTCATATTCAATGTAATACA
TACAAAGTATTTTTATTTATTGTTTCTGGACAAAAATCAAGAAATTGTTT
TTTTGATTATCATTGAATTGCTTATGAGTTTATAACTAACCATTTTTTAT
TTTTTTTGTTATTAATAATTTAAATGTGATGGGATTAAAACATGTTTATG
GATCCTTCATATTCAAATTAATTTATTTGTTTGGCTTTATCTCTCTAAAA
AGGGGGGGGGGGGGGTTAAATCAAATTCAATTTTAGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAAACCATCACATTTTGAACTATAATTT
GGGTGTAGACGTTTACCCTGGTGCCATGATTATAAACCTTTATCCTTATT
TTTGAGCATTCTACTCAAAATATGTGTGTGAGACAAAAAGTCTTGCTTGA
AATTTCATTTGAGGGATTGGATTTTATTCAAATTTATTTAGGAGTGACAT
GACATCTATTTAATAGAATATTTGCTATGATTTGCAACATCCAAAAAACG
TTTTATATTATAAATAGCTCAAACACTAAATATCATAAACTTTTGGCGGC
ACAGTGGCCATAGCGTCATTAGAGTTTGAAAAAGTATCATTGAAAGTGTA
AACGTGTTCAAAACGTTTTAAAACATACACGTTTGAAAACGTTTCAAATG
ACACCCAAGATGATACTGTAAAACCCAAGATCCGGAGGGAGGGACGCTGC
CTTATTTACTCTCCTAGAAACTATTATATGTGAGGGGGGAAAATGTTAAC
TATTATACTCCCCATATTGTTTATAAAGTACTTACAATTTCCAAACTATT
ATACATAAATTTGTTAGTTATTCAGATGGTAGCTTTAGTTTTATTATTTA
TGCGTTTGTAGTATTAATACAAGCAACTGTTTTGTTAAACTATTGGATTT
AGTTGATAAATAAATTTTAATAATATCCCTATACATATAGTAATGCAATA
AGGGTTGAAGTAATGTTTCTTCTGTTCTTATAGCCTTATTGCCTAAGTTG
GCCAGAATTTAGAAATACCTGAAGACACGTAGGTAATTGATGCGACTGGA
CGACTAATAATACCTGGAGGGATTGACACCAATACCTACTATTTCATGAT
TCCGTTCATGAATACAACATCAAGTGATCATTTATACACTGAAACTAGGG
ATGCATTGGCTGGTGGAACACCCATGGCGATAAACTTTGTCTTTCCTGCC
AAAGGTAAAACAATTAGAGGTACATAAAATGTATTANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGTACT
AAAATAATATTTTCTAATAGGTGAAGAATCACTAATTGAGGCTCATAAAT
AGAGAAGAACAAAAGCTGATGGACGTGTATGCTGTGATTATAGTT back to top
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