EMLSAT00000004586, EMLSAT00000004586-700433 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004586
Unique NameEMLSAT00000004586-700433
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s23supercontigLSalAtl2s23:244285..247693 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004586 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004586EMLSAG00000004586-687352Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019972EMLSAE00000019972-728900Lepeophtheirus salmonisexon
EMLSAE00000019973EMLSAE00000019973-728901Lepeophtheirus salmonisexon
EMLSAE00000019974EMLSAE00000019974-728902Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775185auto775185Lepeophtheirus salmonispolypeptide
EMLSAP00000004586EMLSAP00000004586Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004586

>EMLSAP00000004586 ID=EMLSAP00000004586|Name=EMLSAP00000004586|organism=Lepeophtheirus salmonis|type=polypeptide|length=226bp
MSTIRLSEFPGLTKNSDFHGMDEEVSTGTTLLAXEYKDGXMLAADCRTSR
GXLVVNRESNKLTPVSENILCCRSGSAADTQAIAKAVRYNLDMYNVMMGE
TAPVETVAYMFKSICYEYRDSLTAGILIGGWDKIKGGQVYSIPLGGMCVR
QPYTSGGSGSVYLHAFMSANYKKDMSKEECRDLLVKGIASAVEFDGSSGG
SXRWASITKDGIERDIVLYDELPKIR
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mRNA from alignment at LSalAtl2s23:244285..247693+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004586-700433 ID=EMLSAT00000004586-700433|Name=EMLSAT00000004586|organism=Lepeophtheirus salmonis|type=mRNA|length=3409bp|location=Sequence derived from alignment at LSalAtl2s23:244285..247693+ (Lepeophtheirus salmonis)
ATGTCCACAATCAGATTATCCGAGTTCCCTGGACTCACCAAAAACTCCGA
CTTTCATGGAATGGACGAAGAAGTGAGTACAGGAACGACTCTATTGGCCT
MCGAATACAAGGATGGAGMCATGTTGGCTGCGGATTGTCGAACCTCCCGT
GGAAGMCTTGTCGTGAACCGGGAGAGTAACAAACTCACTCCTGTGAGTGA
GAATATCCTTTGTTGTCGCTCTGGATCTGCTGCTGACACTCAGGTACTTC
ATGGATTCCTCATTTATTCATCATTTCAAAATACTTGCTTTTTTGACATT
GTTTAAATTCATTCAAAAAAATCCTTCAATTTTTGACATTTATTTTGTGT
GTTTCAGGCCATTGCCAAAGCCGTCCGTTACAATTTGGACATGTACAATG
TGATGATGGGAGAGACAGCCCCTGTTGAAACGGTGGCGTATATGTTCAAA
TCCATTTGCTACGAGTATCGTGATTCGCTCACCGCTGGAATCCTCATTGG
AGGGTACAAAAAATAGATGTTGTTAATCCTGCAGAGAAACAGCTTCTTTG
CTGTAAGGTCATTTTGTCGAATTTTATGAGTAAATAGGACTTGCATATAA
TAAGTTCTTGGTATCAGTGTTGCTTAAATATTACTTAATTGAAAAGTAAT
TTTGTTACATATATCGATTAAATATGTACCTATTTCATATTGTCCGTTTG
GAGCATTGTCTTTACAATATATAATGAGTCGAAGAGCAAGGTAGCTCAAT
AAACAACATGCTGAGGAGAAATTATTCTCTTAAACTCAATGTGCGTACTC
GGTAGCTTCTCAATAAATAAATATACATTATGTATGGCCTTCAAAAGACA
ATTCCTAGGTCAGATGGAGTGATTATTACAATACTGTAATGTTAACTTAT
AATTAATCAGTGCACCTCCATTTGAACAATTAAAGGAACATTTGAAAGGG
AAAAAAAAAAGAGTCAACTGCACATATTTATTGGTTACTGACATTTATGC
TTAAAAAAAGAATCAACAAAACAAAACGTCTATGCCACTCAGATTAAATA
TCTTACTGTGTATATTTTTTTTATATTTTACAAACTAATATCCCTATATG
ACTGTTTACTACATATCAGTAATATATTACTACTTAACACTGCTTGGTAC
TAACTATTTGTCAAATTCTTTTTTTTTTTTAGTAAAAATAATATTTTACA
CCATGAATGACTGCTTAAGATCGATAACATTGATCCTTATAAGAGTATCT
TTTAGGTGTTCTCATGTATGTATTCAAAAAATATCTCATACTGAAACCAT
ATTTACATTTTTTAGAAGCTAAAAGACGACGAAAAAGTCATTGTGAGCAA
TATACTTCAATAAGAATTGAAATTATGGGGAAAAGTTCCCTTTAAAAAAA
AGGCCACAATTGGATAAAGTTAATGTATATATAAAATTCAATTAGAATTA
GAAATACTTAGTACTCATGTATACGTCTTATTTATAAATAAAATTTCGCA
AAATATCTTTGTGTAAATAAGTTTGTGGCGAGATTAACAAACAAACAAAA
AAAATAAGACTTCAAATTCATGACTTTTTTTCTTTTTTAGATGGGACAAA
ATTAAGGGAGGTCAAGTCTACTCCATCCCCCTTGGCGGTATGTGTGTAAG
ACAACCCTACACTTCTGGAGGCTCCGGCTCTGTCTATCTCCATGCTTTCA
TGAGTGCTAATTACAAAAAAGATATGAGTAAGGAAGAGTGTAGGGACCTA
CTTGTAAAAGGTATTGCATCTGCTGTTGAATTTGACGGATCCAGTGGTGG
STCCRGTCGATGGGCTTCAATTACTAAAGACGGAATTGAAAGGGATATCG
TACTCTATGACGAACTCCCCAAGATTCGATAATTTAATGTATTTTAATAT
TATTATATTTACATCTTCTTATAATTACTAATTAATCACACTATTTGTAG
ATGATGAAAATAAAAATGTACTTTTTTTAAAAGGAAATCAGAATAATTGT
TATTATTTCTTCTCTGATGACTTAAAAAGACGTAAAATTATAATATAAGC
AAAGAAGTAATTAATCATAGAACACACATTAGGTAAAAAATCAACGATAC
ATCTGGATCATTCAAATAAAAGACGTGATACTAATTTTTATAAATAAAAT
AAAATGGAATAAAACAATGAAAAATGCAATTAAATTGTGGTAACAACAAC
GTTTAAAAAAAACTAAAATATTTAAAATAAAAACTGAGTGATGATGAACC
CCTCCCACTAAAAAAAAAAGTTTCACAAATTATAAAAAAACGATAAATTA
TTTTCTAGCCTTGAATTTTTTATTACTCAATTCATATTTAAGACTATTTA
TTTCGTCCGTTTGAGAAGATAGTTTATCATTCATATTAGCTAAATGTTCT
GACATCGTGGACAGTTGGAATTTATAACTAGAGGACGTTGTGTCCATCTC
CTCACACAACTTCTCCTTCTCTTCACGGATACTATATATTTCACACTCCA
TACGCTTTTTGTAGTTTTCCAAACATTTTAAACGCTTTACAAGAGTGAGA
CTCTCCAAATAAAAGGAGGTTGCCTTGGAGTCTGCCAGAATTTTCTCTGA
GAGGAGCTCATCTAATTTACATTTGTATAAGGATTTAATATCCTTGACTT
CATCAGAGGACTCCTCCAATATCTCCCCCTCGCATTTGTATATAGGGGAG
GAGGCCTCTTCTGATTGCTTAAACTTATTAAATTTCATTTCTAGAAGCTC
ATACTCCAATTTCCAATGTTCCTTGCTCTGTTGATTCTTTTTGAGCTCTT
TTTCTAGTCGATCAGCAAGTTCGTTGACATTTTTTATTTTTCCTTTAGAT
TTTCCACTTCGGAGGGCGTCGTGGGCTCGTCTTGAACTTGAATCAAATTA
CCTTCAACATTTTTTGATCCCTCTTTCACTAAAATCCCTATCCGTGTCAG
GTTATCAGACAAAATCCTCGAAAGAGAGTTAAGAACGTTTGACAAGTTGG
ATAAGGCAGCGGCGATGAGTAAGTTATTATTCTTATTCGTATCCGGAGCA
CCCTGTCTTTCAGAATCCATTAAACATACAAAGGAGTTTGAAAGTTCCAG
AACCTCTCGATGCAGATTTGATACACTTACGGATAGATTTTCTAATCCAG
GGCCTGATCGTATATTGGAGGATAATTCATTGAGTCGAAGTGAAGTATCT
ACAAGACAAGATCCGTAGGATCTCAAATGTCGAGACACTCTATATTTTTC
CTCCGAAGAAGTACTTTCCTCAAGCTGGAAAGTAAGTAAAGACTCTAATT
TCCTATAATACTTGACATAGTCATGAAAAGCCGTAGCTAATATGAGGATG
TTCTCAGTCCCTTCTTTATCCAATACATCTTTGAGAAGAGTTTGAAATGA
TAATTCCAA
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