EMLSAT00000004610, EMLSAT00000004610-700457 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004610
Unique NameEMLSAT00000004610-700457
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s240supercontigLSalAtl2s240:271303..274435 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004610 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004610EMLSAG00000004610-687376Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020106EMLSAE00000020106-729034Lepeophtheirus salmonisexon
EMLSAE00000020107EMLSAE00000020107-729035Lepeophtheirus salmonisexon
EMLSAE00000020108EMLSAE00000020108-729036Lepeophtheirus salmonisexon
EMLSAE00000020109EMLSAE00000020109-729037Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775651auto775651Lepeophtheirus salmonispolypeptide
EMLSAP00000004610EMLSAP00000004610Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004610

>EMLSAP00000004610 ID=EMLSAP00000004610|Name=EMLSAP00000004610|organism=Lepeophtheirus salmonis|type=polypeptide|length=931bp
EDYPYKELLDLLANRFFASRTNAFTETDHTCYTVFTAGXSGFLQILPIYX
DHVLYPLLRDGDFLTEVHHINGDGEDAGVVYSEMQGIENLRSSLIYYPSL
DALYPGNCSYEVTTGGKLKNLRDSTSMESIRDFHNKFYVSSNVYITITGS
VSPQQVFEVLKPMEDKIVRKLKEKKGKINTFKRPFSNSIPPFTENKEMEI
NFPSDDEKLGYVILGWRLPAPINEKFYEVNGWEIISTYLTSNSASPLIEE
FVEIEKPLATNVDYELFDFKEPVIFMEFSSVPVEKMPQTEELFRKVLLKI
VDAGPEGFDMNSMKTLIKRVLQRRLIKLENGPQTLIFDPTSNDQMYGEKK
EDLRTFLSKGDSQWGSYFDSKNADFWIDIIKNMMNLLQKKLQELKLKKKD
LGEESLKEAKKSIEDAISQQTLPPESLLKSFPLGNVDSIKFRNLNYYNLS
NGSPPSFNISAVPFKAHLDDVKSDVIRIYFVIDFSTITNPEDRALVPLLY
ELWTQLPITLENGTYLDLSELVRYRTETAIRFRNYFGNKGSTFRPGSQSE
NILFYIETLPEKYNASIQLLKDTLFRPKFTSERFKSVIQQILNGIPVKKS
SPSKVLDAILDNIYFKDNTYIHHASFLRLQKTAVSLLNDLQKDETKILQK
FKSLKDQVLHPKNIFLYVASNLEKNLDSGHLPWINFFGKGEEPPSSEFLS
HRYQTPSENAFKKEKPDFRHAIASVSSSESCYLKQSIYYDNTDWEDNEIA
ALRIALKYLTDRMYNDIRGKGYTYSIGIFLSVTEGKITVKFSRSSLLPEG
FKEFRNVVEKHLNASTWSEYLVDSARGSQIYSSSGSEETVSNLISSSFSS
ILRGAWDPLFNRRFVQRVGKVTFDEIRDSAIKYLPRFLDPNQTFTAIVCH
SNDVDRVVQTLKEFNIEVKKIVDIENSLLSD
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mRNA from alignment at LSalAtl2s240:271303..274435-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004610-700457 ID=EMLSAT00000004610-700457|Name=EMLSAT00000004610|organism=Lepeophtheirus salmonis|type=mRNA|length=3133bp|location=Sequence derived from alignment at LSalAtl2s240:271303..274435- (Lepeophtheirus salmonis)
GAGGATTATCCTTATAAGGAATTGTTGGATTTACTAGCAAATCGATTCTT TGCATCTAGGACCAATGCCTTTACGGAAACGGATCATACTTGTTACACTG TATTTACAGCGGGTAGMTCAGGCTTTCTTCAAATATTGCCCATTTATTTN GATCATGTATTGTATCCATTATTGAGGGATGGTGATTTTTTAACTGAGGT TCATCATATCAACGGGGATGGAGAAGATGCTGGAGTTGTTTACTCGGAAA TGCAGGTGACTAATAGCTGAAGATCATAGATATGTATGTAGAACTACATA TCAATATGTATACACATGGTCCTACATACATTTAATTTCTTCATCCGGAA GTAAGATTCTATGCGGGAACTCATTAGAGCTTATTTCTAAAGAAATTAAT TAATATAATGTAAAAGTAGTGTTCCATGATTATCAAGTATTTTAAGTCAC TTATCTGTGGTTCTAATTATATATTATTTGTAGGGTATAGAAAATTTGCG CAGTTCGCTGATTTATTATCCAAGCTTGGATGCCTTGTACCCTGGAAATT GTAGTTATGAAGTAACTACCGGTGGAAAGTTAAAAAATTTAAGAGATTCT ACGTCCATGGAATCTATTAGAGACTTTCATAACAAGTTTTACGTTTCTAG TAATGTTTATATAACCATAACTGGATCAGTATCTCCTCAACAAGTTTTTG AGGTCTTAAAACCTATGGAGGACAAGATAGTAAGAAAATTGAAGGAGAAA AAAGGCAAAATAAATACTTTTAAACGACCATTCTCTAACTCCATTCCTCC ATTTACGGAAAATAAGGAAATGGAAATAAATTTCCCAAGTGATGACGAAA AACTAGGCTATGTTATTTTAGGGTGGAGACTTCCTGCGCCAATTAATGAA AAATTTTATGAGGTAAATGGATGGGAGATCATTTCTACTTATTTAACCAG TAATTCAGCAAGTCCTTTGATTGAAGAATTTGTGGAAATAGAGAAACCCT TGGCAACTAATGTTGACTATGAATTATTTGATTTCAAAGAACCTGTAATT TTTATGGAATTTTCATCTGTTCCAGTAGAAAAGATGCCCCAGACTGAAGA ATTGTTCAGAAAAGTACTTCTCAAAATCGTTGATGCTGGACCAGAGGGGT TTGACATGAATTCTATGAAGACATTAAGTAAATTCTTTTATTTTTCTATT AAATTGTAATTAAGTTAGTATTTTTCCATTCCAGTTAAACGTGTACTACA ACGTCGTTTAATAAAGTTAGAAAATGGTCCTCAAACCCTAATATTTGATC CAACTTCAAACGATCAAATGTATGGAGAAAAGAAGGAAGACCTTCGAACA TTTTTATCGAAAGGAGATTCTCAATGGGGTAGTTATTTTGACTCTAAAAA TGCTGATTTTTGGATTGATATCATCAAAAATATGTTGAACGCTCCCAGAC TTCTAGTTTATGGACGTCCATTATCTACTTATAAGGATGAACTTGCTGCA AAAGAAACTGCAAGAATTAAAACTCAAAAAAAAAGATCTCGGAGAAGAAA GTCTTAAAGAGGCTAAAAAAAGTATTGAGGATGCAATTAGTCAACAAACA TTACCTCCAGAATCTTTGTTGAAATCATTTCCTTTGGGAAATGTTGATTC CATCAAGTTTAGAAATCTTAATTATTATAATTTGTCTAATGGTAGTCCTC CAAGTTTCAATATTTCGGCAGTTCCCTTTAAAGCTCATTTGGATGATGTC AAAAGTGATGTTATCAGAATATATTTTGTAATAGACTTTTCAACTATAAC AAATCCTGAAGATCGTGCCTTAGTTCCACTTTTATATGAGTTATGGACGC AATTACCAATTACTTTGGAAAATGGAACATATCTTGATCTAAGCGAATTA GTACGTTATCGCACCGAGACAGCAATTAGATTTAGAAATTATTTTGGAAA TAAGGGAAGCACATTCCGTCCAGGAAGTCAATCTGAAAATATTTTGTTTT ACATCGAAACCTTGCCAGAAAAATATAATGCTTCAATTCAACTTTTAAAA GATACATTGTTTAGACCTAAATTTACATCGGAAAGATTTAAATCTGTGAT TCAACAAATTTTGAATGGTATTCCTGTGAAGAAATCATCACCCTCTAAAG TTCTTGACGCAATATTAGATAATATCTACTTTAAGGATAATACTTATATC CATCACGCGAGCTTCCTTCGATTACAAAAAACAGCAGTTAGTCTTTTGAA CGATCTTCAAAAAGATGAGACTAAGATATTGCAAAAGTTTAAGTCCCTAA AAGACCAAGTACTCCACCCTAAAAATATATTTTTGTATGTAGCCTCAAAT CTTGAAAAAAATTTGGACAGTGGTCATCTTCCTTGGATCAATTTTTTCGG GAAAGGAGAGGAGCCTCCATCATCAGAGTTTTTATCTCATCGCTACCAAA CCCCATCAGAAAACGCATTTAAAAAAGAAAAACCAGACTTTCGACATGCC ATAGCTTCTGTTTCATCAAGTGAGTCCTGCTATCTCAAACAATCTATTTA TTATGATAATACTGATTGGGAAGATAACGAAATCGCAGCCTTGAGAATTG CTCTTAAATATCTAACAGATAGGATGTACAACGATATTAGAGGCAAAGGA TATACCTACAGCATTGGAATATTTCTTAGTGTTACAGAAGGGAAAATTAC TGTTAAATTTTCGAGGTCGTCTCTTCTTCCTGAAGGGTTTAAAGAATTTA GGAATGTCGTGGAAAAACATTTAAACGCTTCCACTTGGTCTGAGTATCTT GTTGACTCAGCTAGAGGTTCTCAAATATATAGTTCTAGTGGTTCTGAGGA AACGGTTTCGAATCTAATTAGTTCTTCTTTCTCATCAATATTGAGGGGAG CTTGGGATCCACTCTTTAATCGACGCTTTGTTCAAAGGGTTGGAAAAGTT ACTTTTGACGAAATTAGAGATTCTGCTATTAAATATTTGCCTCGCTTCTT AGACCCAAATCAAACATTTACGGCTATAGTTTGTCATTCAAATGATGTGG ACAGAGTTGTTCAAACTCTTAAGGAATTCAATATCGAAGTTAAAAAGATA GTTGACATTGAAAATAGCTTACTTTCAGACTAA
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