EMLSAT00000004626, EMLSAT00000004626-700473 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004626
Unique NameEMLSAT00000004626-700473
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s240supercontigLSalAtl2s240:74838..75950 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004626 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004626EMLSAG00000004626-687392Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020181EMLSAE00000020181-729109Lepeophtheirus salmonisexon
EMLSAE00000020182EMLSAE00000020182-729110Lepeophtheirus salmonisexon
EMLSAE00000020183EMLSAE00000020183-729111Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771447auto771447Lepeophtheirus salmonispolypeptide
EMLSAP00000004626EMLSAP00000004626Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004626

>EMLSAP00000004626 ID=EMLSAP00000004626|Name=EMLSAP00000004626|organism=Lepeophtheirus salmonis|type=polypeptide|length=294bp
MIPIEIYDVSRKKLSVNDTTCSFNAFKRGPDQKVIGFTFYEPNPENTNKL
NREYFEGISENLRLISKFYPGFVMRLYYQARESDTIKKLCNISCSNSHLD
LCDITEXPMLGNSSVLYPLLWRFLPVLDKQVSLFLSRDLDSRISQREVSA
VETFLESDEYSFHVMRDXPAHAXTIMGGTWAVKVDRHRKEFKSSFKKLFK
DTSGLAYINRTLGGYDQVALSKYVWPWAKWRALSHDSYLCKKYPRTSPFP
TKRVEGIGNYVGSVVSLNATIGFTSASECPFKCRPRDHKDWIFC
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mRNA from alignment at LSalAtl2s240:74838..75950-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004626-700473 ID=EMLSAT00000004626-700473|Name=EMLSAT00000004626|organism=Lepeophtheirus salmonis|type=mRNA|length=1113bp|location=Sequence derived from alignment at LSalAtl2s240:74838..75950- (Lepeophtheirus salmonis)
AAATAGATCCCTCATTTGTCGAGCTTTTCAATCCTCCTTGTGATTGCTCC
AGAATAATAAAAAGGAAAATGATTCCTATTGAAATATATGATGTCTCCCG
TAAAAAGTTGAGTGTAAATGATACAACATGTAGCTTCAATGCTTTCAAAA
GAGGCCCAGATCAAAAAGTAATTGGTTTTACCTTCTATGAACCCAATCCT
GAGAATACGAATAAGCTTAATCGAGAATATTTTGAGGGTATTTCTGAGAA
TTTGAGATTGATATCCAAATTTTATCCCGGATTTGTAATGAGGCTCTATT
ATCAAGGTGAGTTAAGAAAGGCATCAATGATGATGAATCATAAACATTCA
CTTGTTAATAATGATTACATCATAAAAATATTACCCAATATAGCAAGAGA
GTCGGACACAATTAAGAAGCTGTGTAATATATCCTGTTCAAATTCACATT
TGGATCTGTGTGATATTACTGAAAMCCCAATGTTGGGAAACTCGTCTGTT
CTCTATCCATTACTTTGGCGTTTCCTTCCAGTTTTGGATAAGCAAGTCAG
TTTATTTTTATCTAGAGATCTGGACTCTCGTATTAGTCAACGGGAAGTAT
CAGCTGTAGAGACGTTTTTGGAAAGTGATGAGTATTCATTTCACGTTATG
CGAGATCKCCCCGCCCATGCAKCCACCATTATGGGAGGAACATGGGCTGT
CAAAGTCGACCGTCATAGAAAAGAATTTAAATCATCCTTTAAGAAGTTAT
TCAAAGTAAGACAACTTACTTTTATTTCGAATATTTCTAACAGTAAAACT
TATTAAAATATGATATATTTATTCCTCGTAGGACACATCGGGCCTTGCAT
ATATAAATCGAACTTTAGGAGGATATGATCAAGTAGCTTTATCCAAGTAT
GTATGGCCCTGGGCCAAATGGAGAGCTCTATCGCATGATTCTTATTTGTG
TAAAAAATATCCTCGAACATCTCCATTTCCAACTAAAAGAGTCGAGGGCA
TTGGAAATTATGTTGGAAGTGTAGTGAGCTTGAATGCCACAATAGGCTTT
ACTTCAGCAAGTGAATGCCCTTTCAAATGCAGACCAAGAGATCATAAGGA
TTGGATTTTTTGT
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