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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s242 | supercontig | LSalAtl2s242:240970..246172 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004645 >EMLSAP00000004645 ID=EMLSAP00000004645|Name=EMLSAP00000004645|organism=Lepeophtheirus salmonis|type=polypeptide|length=179bp
MRILAEEALCRLPTIVKKEMRTPCGVIEGLVEDGDVKLCVVSIVRSGDIL
QEAVRQISPGVKLGKILIQRDENHVDKVPIFLYDKYPKDIDSCFVILTDP
MLATGGSATLAIKMLLDKGVKEANILFLNLICAPEGLEVLKNNFPKIQVV
TGAIDKCLNSEKFIVPGLGDYGDRYSGTG back to topmRNA from alignment at LSalAtl2s242:240970..246172+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004645-700492 ID=EMLSAT00000004645-700492|Name=EMLSAT00000004645|organism=Lepeophtheirus salmonis|type=mRNA|length=5203bp|location=Sequence derived from alignment at LSalAtl2s242:240970..246172+ (Lepeophtheirus salmonis)
CAGCACTCTCCTTCCTGAGCGTAGTGTGAAACATTCATTTCTGTGAGTGA
GAAGCCGTCATGGAGGTGACAGTAATTCAATCTCGTGCTTTGGAATATCT
TTTATGTAAATTAAGGGATGTTAATTTAGGTCAGCGTGAATTTGTTCATT
ATGGAGATCGGGCCATGCGAATCCTCGCAGAGGAAGCACTCTGTCGCCTC
CCAACAATTGTAAAAAAGGAAATGAGAACTCCATGCGGAGTGATTGAGGG
GCTGGTGGAAGACGGAGATGTCAAGCTTTGTGTTGTGTCAATTGTGAGGT
CAGGTATGAACTCTTAATAATAACTAGTAAGTCCTAACATCCGAGGCGTT
CCCAGGATTTTTTTAGATATAAATGCCAAATTTGACAAATAACTTATGTT
ATTTAAATTTGAACGAAAAATGAATTATAAAACTTTWTCAGGTTTTTTTT
TTTGGGGGGGGGGGGACSTCTKCAGCCTCTCCAGCCCGCTTGCGGAAGCC
CCTGAACATAATATTAAGTAACAGACATTAATCCATGATAAAAATTTCTT
AGGAGACATTCTTCAAGAGGCAGTTCGTCAAATTTCCCCAGGAGTTAAAC
TCGGCAAAATTTTAATTCAAAGAGATGAGAACCATGTGGACAAGGTTCCC
ATTTTTTTATATGACAAATACCCTAAAGATATTGACTCATGTTTCGTCAT
TCTGACGGATCCAATGTTGGCAACAGGAGGCTCAGCTACACTTGCAATTA
AGATGCTACTTGACAAAGGCGTCAAAGAGGCAAATATCCTTTTGTGAGTA
TTTATATTTTATTAATGAATATGATGTAAGTCTTGGAATAAAATAGTTTT
TTTTTGTATATTTGTAGCTTGAATCTAATTTGTGCCCCTGAGGGTCTTGA
AGTATTAAAAAACAATTTTCCAAAGATTCAAGTGGTAACAGGTGCCATTG
ACAAGTGCCTTAATTCAGAAAAGTTTATTGTACCAGGACTTGGAGACTAT
GGGGATAGATACTCAGGAACTGGATAACATGTACAGTATGGGCATTGCTG
TCATTTGTCACTCATATTATGTATATACATAAATTATATTCATTTATTGT
GCCAAACGATCATTTAAATAAATAATAAATAACTAATTAATAATATTTAC
AATACCTTTAGACTCTTCTAGTTCTTGCACTGATTCCAGAAGTTTCTCTA
GAGGCATAGGAGAATGATCACGCATTGATTCATTTTGGCTAATAGCAGGA
GATTGTCTTGAGTTCATTCCACTTGTCTGCTCAACAGAACCTTCAGGAGC
TTCCCTTTCGAGCATGGGAGAACTATCTTTAGATTGAATGACAGAGGACG
AAGCAAGCAAATTTTGTTGCTCTTGTAAAGACAAATGTAGCATTATGTTC
TTGTTATCTAAGTCATCAATTTGCTTTTGAAGCTTAGAAATGTCCTCAAA
ATGTTTAGAGCCAATTTGCTGTATTTCATTCTATGCACACACGCACAAAA
GGGAATGGAATAAAATGAAATTAAGCTAAAAAAATAAAAAAATATTTGCT
GATGGTATTACCTCGTAATACTGAGCCTTTTCCTCGGCCTTTATCTTATG
CTGGATCGATAGTTCCTCAAGAGATGATTCAGTCTGATTAATTGTATTAA
CTAATTCTTCATGTTTATTGCGAGCAGCTWTTTCTTTASCAGCCATTTCT
TCTAGTAAGGATGAGTGCCTCTGCATTAATCTGTCGTGATCCTCTTGAAG
GTGATTTTTGTCCATGTCAGAAGATGCCAATTTATTTCTACAAAATTCAT
GTGAAAATATAAATAATTTATAATAATTATTATTATTAATATCAAACCTT
AGTGTTTCAATCTTTTCATTTAAATGTTGTATCGTTCTTTCATATTGACT
ATTTTCAATGGACTTATTCTCATTGCTTTGACTTTCCGAGTCCTTTGAGG
TAGTAGATTTAGACTGCCTTAAAACACTTTGAGCTCTCAATTTATAAGAC
GAAAATTCATTTTGCAAATCTTTGAGAGAAGCTTCCATTTCTTTGAAAGA
ATCATCTTTGCGCCTTACTTCCTCTTCAAGTGTGGAAACCTTTTTTTGCA
AGGAGTCATTCTTTAATCTCAATACTTGGGTCTCTTCGGCTGCTAGGAGT
GAATCGTTTTGAAGCTTGGATTGAAAAAAATCCCTCTCGGCGGTTAAATT
TTGCACCTTCTCCCTCAATTCTGACAATTCCGAGTTTTTTTCTGTGAGCT
GAAGCTCACAAGATGATAGCTGACGAGAACAATCACTGAGCTTTTTCTAT
ATAAAAAAATGAATTAAGGTCAAAAGGTTTACTGTCACATGGAATTCTAA
GAAAAAAACCCCTAAAATTAAGTGTTATATAGTAACAAATATTAAATAAT
GCTGTCATAAATAGGATCGTAAATTAATTAAATAACCTGTATCTCTTCAG
AATTGTCAGTCTCATCCTGAAGGGAGGATTCTAATGTTTTCAATTGGACT
TCTAAATGGTTTTTTGCTTTTGTTTTTTGCTCAAGCTCTGACTCTAAGAC
TTCAATCCTCTGCTCTTTTGTATCACTCAAGTCTCGAAGTTCTTTTAATT
CTTTCTTGTTAGTTTCTAATTCAGTGTCCAAAGATTTCGCATTCTCCAAA
ATCTCCTCTTTCTCATGGTAGGAATCAACCGTTTTTTTCAATTCCAAAAT
ATATCCTTGACTTGACTCATCCTTCTGCTTCAACTCAGAAAAATCTTTAT
TTAATTTAGTAAACATATTTTCAGTTTCGGACAAATTATTTTTCAATGCC
TGATTATTAGTATTCGCTAAATTTAAATCTTCTTGTAACTCTAATATTTT
CTGTTTAGAAAGAACGAGATCCTCCACGGATTTTTTCAAGTCAGACTCAA
CAACTTTGATAAAAGACTTTTTCGCTTGTACTTCTTCCCCTAATTCATCA
AATGCACTTTGGATGTTTGACATGTTATTGTTTGTTGCTAGAAGTTTGTC
TTTATCAGCCTTTCGTAAAGCCTCCAGCTCCGCAACTCTTTTCTTTAATT
TGACAGCTAAAATTTTCAATTTAGCATATCTTTCTTCAAAATAACCTTCG
CAATCAGCTAAACGATTTTGTTCGTCAGAGCGACTAATAGAGCATGTACT
TGCTACTTCACTAAAATTATCTGGGATCACACTGTCCTTACGTGAGTGCT
GCTTCGCTATTTGAGACTTAAGTTCCCAAATTTCCTTCCCTTTCTCTTCA
GCAAGCTCTGTCAACTTCTTCTCCATATCCTGTTTAATTTCATTGATCTT
GTCATCATCATTTTCAACTTTTTTTGAGATCAATTCCGTAGTCTGGATCT
CATATGCTTCAACACTTTGTTTCAAAGACTCAATTTCAGTCTCGTACTCG
TACAATTTTTCAGATACACGATGGAAATTTTCAAAGTGTTGACTTAAACT
AAGAAGCATATCATCGGTTTTTAAATCATTACTCATCAACACCTTTTTCA
AGCCCTCTCTCACCTGACTTAAACTATATGCTTCATTTTTGTATTCTGAC
ATTTGTGCATCATGATCCTTTTTACATGCTTCCAATTGACTTTGAATTGC
ACTTGTTTCTGACAATAAATTTTGAACTTTTTCTTCTAAAACTGATTTTT
CTTCACGTAGTTTGGAATTATTCTCTTTGAATGAGGCGGTTTCCTTCAAT
TTGAGCTTTTCAAGCTCTAACTTTTCTTTTCTCAATTCATTGTGGCTTTG
AGTCAAATTTTCTAAATCTGTCCGAACAGATCCCAATGTGGACTGTAATT
CATCCTTTTCATTCAGTATTGTTGTTAGCTGAGAGGCAAAATCTTCTTTG
AGCAAATCTTCTTGCTTTTTTAATGCATCTTTTTGATTAATATCGTATTC
CAACTTGAGATGAATGAGCTTTTCTTCACTCTGAGTCAATTCCTTCTTTA
CATTTGACTCCAACTCTGACTTGTAACCTTGGTACTTTTTAACAAGATCG
TCAAAATCCTTTTTAGATCTTGAAAGTTGATCGTGAAGGCTCGTTAATTT
TTCCTCCTTTAAATCAGCGTTCTTTTTAAGATCTGAAAGAGCTTCATCAC
GCATCTTTTGATCATTCTCTGATTTTTTTTCAAGCTCATCCTTGGTAGTA
TTGTACAAATTTTGAAGTTCATTTTTCTCATTCTTTAATTCCTGTATTAC
TTTTTCTAAATTTTGCTTTATTTCTCGCTCTGAGCTCAATTGCTTGTTCA
ACTCCTCAACGGAATTGTTTTTCTCAGAAACCACAGTTTCAATGGCATTT
TTGAGAACAGTGGCAGTTTCTTTATGAACCAATAATTCAGCCTCCATTTC
TTTTATACTTCCTTCACTAGCACGACTGGTTTGAGAGTCTTCAAGTTCCT
TGGTAATTTTTTTGACGTCTTGTTTAACGCTATAGAGTTCGGATATGAGC
TTCCCTAGTTTATAATTCTTTTGAGAAGTAGTAATTTTTAACTCATTCTT
TAATTCCTCAATAGCTCTACTATGGATGACTCGCTCTGCATCCAGCTCTT
TCATCCATTTCGATTTTTCTTGCTCAAACGCTAAACGTGTATCATAGAGG
GCACTACTTATAAAGTCTCTTTGAGGATATTTATCTCTAAAACAAAAGAA
TTAAAACTATTCAGGAAGGATTCATTTAATGAAATACGTACATGGGACTT
ACGAATAAAAAGGCCGAAAGAACCAATCAAGGGGTACTTCCATATCATAA
AAATAATTGAATTGCTTTTTATTATTAAAAAAATTGTTTTACTGTGCCTT
AAAATATTAGTTGAACAACATAATATATTAAAGTATTCTTTTACTTAACA
GGGCGTTCTATTGCAGGAGCAAGTGTACACGTTTTCATTAAATTTTTACA
ACTGATAAAGTGTTAAAAAAGGCCTCTCACGGCAAGGAATAATTAATTTT
CTCTTAACTCTGATGGAACTACGCATATACTACATGCATAAGTAATATGT
ATGTAAATTATCGGCATCAGAGTGAACAACATAGGTATATCAATTCCGAT
GGGTACACTACAAGTTGAAATGCAATGCCTTTAACTCTTGTTTCTCCCCT
AACAAAACACCTTCAATATAATAATCGAAATTTATATTTAACTTTGAATA
GGGAATAGACGTAGTTAGTGGTATGTTGAAAAATAATTACTTTACCTGAA
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