EMLSAT00000004647, EMLSAT00000004647-700494 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004647
Unique NameEMLSAT00000004647-700494
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s242supercontigLSalAtl2s242:261320..264212 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004647 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004647EMLSAG00000004647-687413Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020263EMLSAE00000020263-729191Lepeophtheirus salmonisexon
EMLSAE00000020264EMLSAE00000020264-729192Lepeophtheirus salmonisexon
EMLSAE00000020265EMLSAE00000020265-729193Lepeophtheirus salmonisexon
EMLSAE00000020266EMLSAE00000020266-729194Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775480auto775480Lepeophtheirus salmonispolypeptide
EMLSAP00000004647EMLSAP00000004647Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004647

>EMLSAP00000004647 ID=EMLSAP00000004647|Name=EMLSAP00000004647|organism=Lepeophtheirus salmonis|type=polypeptide|length=322bp
MSSXAYDTSVFNPSDPIFTDWQMNSAASGGGYYGMHPHXPTQAPPFFRYM
RHPSSAPTIKQEMTCLWIEQDCLLKKPCNKVFGSLHEIVTHITVEHVGGP
EISNHACYWENCAREGRPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFA
RSENLKIHKRIHTGEKPFRCDFEGCDRRFANSSDRKKHSHVHTSDKPYNC
KVRGCDKSYTHPSSLRKHLKVHGKDAVFVSEYDSDXSASQSQADTTSSSL
DVGVSSSHVQPSHILGGTGGNNNDMSLPENPPTPCAPLGSGGLSTEVDPL
AINQHHFMSYHPHQSSVIYLMT
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mRNA from alignment at LSalAtl2s242:261320..264212-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004647-700494 ID=EMLSAT00000004647-700494|Name=EMLSAT00000004647|organism=Lepeophtheirus salmonis|type=mRNA|length=2893bp|location=Sequence derived from alignment at LSalAtl2s242:261320..264212- (Lepeophtheirus salmonis)
ATGTCTTCGRCAGCCTACGACACCTCTGTCTTCAACCCCTCAGATCCAAT
CTTTACGGATTGGCAAATGAACAGTGCAGCTTCTGGAGGAGGCTACTATG
GAATGCATCCTCATCKCCCCACTCAAGCCCCTCCATTCTTTCGCTATATG
CGACATCCCTCAAGTGCTCCCACCATCAAACAAGAAATGACCTGTCTCTG
GATCGAGCAGGACTGTCTCCTCAAAAAACCCTGTAATAAAGTCTTTGGAT
CTCTTCACGAAATTGTCACACACATCACAGTGGAACATGTGGGTGGACCC
GAGATCTCGAATCATGCCTGCTATTGGGAGAATTGTGCTCGAGAGGGAAG
ACCTTTCAAGGCCAAATATAAACTCGTGAATCATATTCGGGTGCATACGG
GAGAGAAACCCTTTCCCTGTCCCTTTCCCGGCTGTGGAAAAGTATTTGCT
CGCTCCGAGAATCTCAAAATCCACAAAAGAATTCATACAGGTAAGACAAA
CAAATCCATAAGACAACAAATAGATAGACAATAAGGCAGCTATAATAAAG
TACGCTTTTCATAAATAAATAGAAAATTTGTCAAAAACGGTTATAAAACA
ATTGAAGGAACACACTGAGTTTTTGACATTTACTCCTCGCGTGACCATTA
TTACCTTTGTGAACTTTTATTATTTGTTTTTACGTTTGTTCGTTCGTTCA
TTCTTTCTTTAATTTACGCCTTTCCGGCTACTATTTTTATGGCTCCCCCC
CATGCTTTGTTTCTTCAAGACAAWGGCMCAGAAAATTGTGGCTTCAAATA
GCTGGGTCATAAATCCAAAAACACCCTCAAAAATTGTCAACTGATTGGCG
CGTGTGTTCAACTCTACTATTGTTATTATTGTCATTAAACCCACGTTATA
ATTAAAGCCTTGTGTTGTAATAGGGCTACTGCTCAAGCAACCCTGGCTCA
TGTCCCTATTTCGTTGTTCTATAATGAAATACATAACATGGTGCCCCCCA
GAGTGTTTCACTTCTCATTTCTTATTTTTTTGATATAATAAATTTACTTT
TTCATAAAAAAAATATTTTTCTTTTTCTAATGGCTGYTGAGCCAAGTTAT
AACCCTCAAAAGAGGGGGAAATATGTAAAGCACTGATAGTAGTTAGGTAG
GAAGGTAGAAGTCACTAGGTGTCCAGAATGGAATGCCATTCCTTGAAGGA
TCTTCCATTTCTGGAGAGGTATTATTTCTTATTTTTTTTTTTTTTTTCAT
TTCAACTATCTTTAATAATGTAGAATTATAATTTATAAGATCATTTTTGT
CTCAATATAGAAAATTAGAAGTGAATAATGGCGTGTAGATACATATTTTT
GGGGGTATAATTATCTCACTATATATATATATATATATTGAATCTCATTA
AGAGTATTTANTATATTGAAATCTCATTAAGAGATTTATTTATAGAAAAT
CTTATTATTTTTAAATTTTCTCTATTTCTTTACTTTTCTCAGGTGAAAAG
CCATTTCGATGTGATTTTGAAGGTTGTGATAGACGATTTGCGAACTCCTC
TGATCGGAAGAAGCATTCTCATGTCCATACATCTGATAAACCTTACAATT
GCAAAGTACGAGGCTGTGACAAATCATACACTCATCCATCGAGTTTACGT
AAACATCTCAAGGTAAGCAGCCCTTTTTACAATTAACTTTGTTAGACAAC
CATGGTTCATTCTGGCTTTTGTTTGTATGTAGGTTCATGGTAAGGACGCT
GTCTTTGTCTCGGAATACGATAGTGATGMCTCTGCGAGCCAAAGTCAGGC
TGACACGACAAGTAGCTCCCTGGACGTAGGCGTCTCGTCATCTCATGTTC
AACCATCTCACATCCTGGGAGGAACTGGTGGAAATAATAATGACATGAGT
CTACCAGAGAACCCCCCAACCCCTTGTGCTCCTCTTGGTTCTGGCGGACT
TTCCACTGAGGTGGATCCTCTTGCTATTAATCAGCATCACTTTATGAGCT
ACCATCCTCACCAATCCTCTGGTGGTGGCGCCAATMCCCCTCCACAACMC
CCCCATTTCCAGCATCMCTTCCAYCMCGCCMCCGCCTCTCCTCACCAAAG
CCACCCCGGAGTTCATGCCCCGGCTCATCACCATTATTCCACCGTTCCAT
CCCCCAATCTAGACTTTAAGCCCGCTCATATCTCGGATTGGTMCTCTCAT
CACCACTCCGTTGCAGCTGTTTCACATCATCATCMCCACCATATGATGGC
CTCCTCTGGAAGGGCGGCCTTTGGGGGATATGAAACGACGAAACAGGGAT
CTCATCAAGNCTCTGCTGCCCTYCCTMCMCCYCCCYCCACAGGCCATTCY
CCACTTGGTCATCACCATCCTCATCATCATTACCCCTCACATCATCACCC
TACTCACATACCCCTACTCCCATCCTCANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTATACATAAATAAAGTGTGATGTTATTA
TTTTTTATAYAAATCTTTATATTATTATTCTCTTTATTTCTATATCATTG
ATCTCTTCATTTGTCTTATTATTTTCTAGCCCCCTTTCTTAATTATTATT
ATTATCATCATTATTATATTTAGTGATTTATTTAATGACATGA
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