EMLSAT00000004654, EMLSAT00000004654-700501 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004654
Unique NameEMLSAT00000004654-700501
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s242supercontigLSalAtl2s242:732330..738978 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004654 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004654EMLSAG00000004654-687420Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020312EMLSAE00000020312-729240Lepeophtheirus salmonisexon
EMLSAE00000020313EMLSAE00000020313-729241Lepeophtheirus salmonisexon
EMLSAE00000020314EMLSAE00000020314-729242Lepeophtheirus salmonisexon
EMLSAE00000020315EMLSAE00000020315-729243Lepeophtheirus salmonisexon
EMLSAE00000020316EMLSAE00000020316-729244Lepeophtheirus salmonisexon
EMLSAE00000020317EMLSAE00000020317-729245Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779519auto779519Lepeophtheirus salmonispolypeptide
EMLSAP00000004654EMLSAP00000004654Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004654

>EMLSAP00000004654 ID=EMLSAP00000004654|Name=EMLSAP00000004654|organism=Lepeophtheirus salmonis|type=polypeptide|length=391bp
MFQLFSQVYPHIRFRDHQIKKPSNYVFQLHYRITFGILLVCIILVSSYEY
IDSSGSAIQCFMDRGXDIPENVINRYCWIQSTFTLPTSYDPALILRNNPG
VGAIFDENSTQYHAYYQWVPLFLSMQAIFFYFPHWLWKVMEGGRLKSLVA
QLKEKKEENDKEALQECFSRISEYFAVHMKEQWEHRIWALKYLFCETLNL
FNVIFQMSLTNTFLRGEFKGYGGKVLDYIFQDPEYRDDPMSKVFPKVTKC
TFKKYGGSGTLQKLDAFCVLGMNIINEKVFVFLWFWFWILLILNIINLGM
RVIYYFYPQTRYTRPDTTDLKHWKMKPKFMGNMDVVKRMTFSDWIVFAEM
SRDIDKQDINIILDGIAREYLPSYSMEMSERQNETDTLKLK
back to top

mRNA from alignment at LSalAtl2s242:732330..738978+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004654-700501 ID=EMLSAT00000004654-700501|Name=EMLSAT00000004654|organism=Lepeophtheirus salmonis|type=mRNA|length=6649bp|location=Sequence derived from alignment at LSalAtl2s242:732330..738978+ (Lepeophtheirus salmonis)
TTCAAGTGCCTCATGAGGAGTATTATTTATTTTCCTCTTTTTATATTTCA TTTTAATAAGAAGTATGTTTCAATTATTCTCACAAGTGTATCCTCACATA AGGTTTCGTGATCATCAGATAAAAAAACCAAGCAACTATGTTTTTCAACT CCATTATCGCGTACGTAATTATCATTAATCTTAAGATTTAAGTAGTATTA CTACTACTCCAAGTACTTCCTTTAAAAAAATACAAAACGCTAGATGTATA GTCACAAACCTAGCCACATTTTACTAAGGATGAAAATTACTAAGAGTCGT TACATTGGGCCAATATGCGTTTGTGTCATTGTTGGTTTAAGTCACTTGTT TCCTTATTTTTGCTGCATTAAAGTACAGATGGCCGGGACTGACTTTAGTC TAAGCAGGCAAAGATATATGTTCGGGCACTATTCTTTACTTTTTTATATT TAAATTTTATTGTTTATATAATTTAGAATCTTCATTTTTAATACAATGCC CGGCCCTTTTTATAAGGGGTGTACCAAAAATCAATTTGACCGATTACTGG TTCATTGACAGTTGTTTATCGGCAGYTTATTGATTAATTTTCTAGTAAAT ACTAAACAGAGTTGAGATAAGGCCAGTGATCTTATTGTAAAAATCTCACA GGTAACAATGCATTCCCCTCTCACTAGTTACTTTCAAACCGTTGGAAGAC GAGGATACTGTATGTCACTGCAATGACCTTTTTTACAAATGATTTATTAA TTTCAGAAAACTATACTCTTTGCAATGTCTCTATTATTTATTTATAATCA AGTGCGGGGCCGGCTCAAATGACCTTATGTCAGAATTGTACTTTTGTGTA ATATGCGGAAAATTTTGAAGAGCCACAATTTTCACTTTTGTCTCATTTAT ATATGTTTATTAGAGTGACCATATTTTGATTTCCAAAAAAAGATGACACG TGGTTGAGTCGTTATTGTTTTTAGGATTATTATTTTTTTTTGAATATTTT GTATCTCCCTTTGTTTATTATTAAAAACTTTTTGAATTTTAATCTTATTT GTTTCTAATATTACATTTAACTATTTGTCTCCTTTAAACCTTCCATGAAT GTATTAAAAATGTTCCGGGAGCATATAAAAAGAGGATATGTCCGGAGAAA GAAGATGTTTGGTCATTCTAATTTATATTAAATAACAGGACTTAGGTAAA TACGTTTGAGTGATGCAGTCAGTCTTCTACAACGTCTTGGGATACAGAAA CGAATTCATTTGTGAAGGGTGGATCAGTTATTCAAAAAAGGCTGCCTTAT ATTCATGACATCCTCATTCTACAACTTTTAATTGGTATTATTTCTCAATA AGTTAAAGCCAGTTAAAGGCTTATGTTGTTGTTTTTTTAATTTAAAAATT TCATAATTTTCGAGAAAAACAAAATTTAAATATGTCTTCAATAAAAGAAA AAGTTATTTGACAAAACTTGTCAAAAAAGACCTACCCACACCCCTTAATT GCAAATACATATACATTCTAGCGCCGGTGAGACAATYCCTGTCTATCCTT CTTCTGTTCCTGTGTCTATAATCAGGGGTGTAAAAAATATGTAATTTGAA GATCGTGACCTTTTTGAGATTGCCTGCTGAGAAGATTTTTTATCTACCAA ATCTGCCATCATTATTTTTTATTCTTGAAAAGGCACAGAGTAACTTTGTT GCAAAGTTAAAATTTGCAAGTCCTTGTTGGACTCAGAGTAGAATTGAGGA TCGACATCGTTGCCATTCTTGCCTATAGCATATCTAGATACGGAGTGGGG CTTCTAATGCATGAAACGTCATGACAGCTGAATTGTTCTCCTCCAAAACA TTCTTCAAACTGTCAGAGTAAACTTTGAACCTTTATCTATGACTAGGTCC ACCTTACACATTATTCATGTTAAAAGRATTCATGCAAAAAAAGTATAATA TTGACTCTATTGGCGTCACTCAATTTTTACTTAAGCCGGCAAAGATAATA AATGATTACATTGGCGTGGAGCATGTCTCCTTCATGGATACTGCAAACAT TATACAAACATACTCACGACTAAATTTTTTATTCTCTCTCAACCTCAACT ATCAAAAAGGAATCCAGTATTCTGGATATCCCTTTTTTTGTACCTGAAAA AAACGAAATTGTAATTTTCACTGATTTATTTTTTTACCCATAACTTTTTT GATTTTGAATAAATTCAGAAAACGTCATATTTTTTTTTTTCTTCATCGAA TTTTGAATAGGTCGTGTTAAAATTAGCCGTTTTTGGGGGGATTCGATATT TACTTAATGTATAATTTAACAACGATCTATTTTAGATTACATTTGGGATT TTACTCGTGTGTATCATTCTCGTGTCCAGTTATGAGTACATTGATAGCTC TGGGTCTGCGATTCAATGCTTCATGGATAGAGGAGMTGATATTCCAGAAA ATGTGATAAATAGATATTGTTGGATCCAATCCACATTTACACTCCCAACG GTAAGATATGATTTGAGCACAAATAACTTAATTCAAAGAGTCTAAGAAAA GAGACGACAACGCAGTTTAAATTGAGATGAAACAAAAAATTATGAAAGCA AATAATGTTCAACCATTACCGCAACTTCAATAGAGAAACATTGACTAGAG TGGTACTTTTGTAGAGTGCAAGGATAATATGACATTCACTTTTCTCTGCA AAAGTCCCATCTGTAACAAACAAAAGAGGAACTTAGCGCAGAAAAAAAGT TTAGACTTATCATAATTCAAGGTGATCATTTTTTTACCTATTTATCGTCT CTTCCCTTAGAATCTCTTTAGCTGAATCAACCAACTGAGTGTCCCTCTCT TTCTATTGTCAATCCTTTAGAGTTATGATCCGGCTTTGATTTTAAGAAAC AACCCAGGGGTTGGAGCAATTTTTGATGAAAACTCTACCCAATATCACGC ATACTATCAGTGGGTTCCCTTATTTCTTTCCATGCAGGCGATATTTTTCT ACTTTCCACATTGGTTATGGAAAGTAATGGAGGGAGGACGACTCAAAGTA AGGCCTGTTGATCTCCCTCGTATCCTAAGCCTCTACTATCTTTTGTTTAT TTCAGAGTTTAGTGGCCCAACTGAAAGAGAAAAAAGAAGAAAATGACAAA GAGGCACTCCAAGAGTGTTTTTCCCGTATATCTGAGTATTTCGCTGTTCA CATGAAAGAACAATGGGAGCATAGGATTTGGGCCCTGAAGTACTTGTTTT GTGAAACATTAAATCTTTTCAATGTCATTTTTCAAATGAGTCTTACAAAC ACTTTTCTTAGAGGAGAGTTCAAGGGATATGGAGGCAAAGTAATGTTATT TTAGTCATTGAATACTTTACCCAATCATTAATATTTCATAATTTCCTGAT TAATTCCAATTGAGAATGCCTAACTATCTAAATACTTTAACTATGTAATC TGAGTTTTGTGCAAAATGGGTAAAAACTTTGAATATTTAAAAAAAAAATT CCTGACTGTTACATGAAATGACAATTTTTTAAATAAAATAAGAGACCTTT CATTTTAAATAAAAGTCCTTTCTTAAATAAAAATTTAGGTTATATTAATC CAATTACCTTTTTATTCGAAAATAATGTTTTATTTAAGTTTTGAATGACT TTTTTTCAATTTTTAAAACCGACATCCCATTTTTTGCGACTTTAATAGTC CATGCAGGATTGTCTCCCACCTATAGCATTGACTCTGCTCGTAACTTAAG TATGAAAAAATTATTCGTGTTTCGGTCACATGTCGCTAGTTGGCGTATTG TTTAGTGGGTTTTAAAGCGTTRAAAYACAGTGATCAAAGCTTTTCCTGTT ATTTTTTTTGTGCGGTTTCATGYACTGTTTTTGACACTTAAAATGTGTTC CAATAAAGAAAGAAGAAAATACAATTTTCGAGCTAAACCTTGATAGTTAA GAAGGAATTTTTAGTATTTTTTTCTTTTGTTTTTTGTGGTAAAAATTTCA GAGAAACATCAATTTTTATGTGTCAAATTTATACGTAAACGTGGATCAAA TAAGTGTCATGTTCCAAGGGGTTCTACTGTATCTAAATAAATAAATACAT ATTTCTCATCTTTTAGAGAAGCGATGGTAAATCAAACTTTATACCTATGT ATAATTAAAGCTCCATTCTTTAGGTCTTGGACTACATTTTTCAAGACCCA GAATATCGAGATGATCCCATGAGTAAAGTATTTCCGAAAGTAACGAAATG TACGTTTAAAAAATACGGTGGATCTGGAACACTTCAAAAATTGGATGCAT TCTGTGTTCTTGGAATGAATATCATTAATGAAAAAGTATTCGTTTTCCTA TGGTTCTGGTTTTGGATACTACTCATTTTAAACATTATTAATTTAGGAAT GAGGGTTATCTACTATTTCTATCCACAAACACGTTACACGTAAGTACATA TTCAAGATATAGATTTAATGGCAATCAACAAATTGGAAGGGGTTCAGAAA GTATGTGAGGATCATGCTCCCCGTCCCAGGGGCGTCTATAGGATCATGTG TATATATATGTCGTTGGTTTTTGGAATTTTTTTTGAAAAAGACCCAAAAA TTAAATTTTCTGAAAAAAAATTCAAAAAATCCACAACTATTCACAAAAAA ATTCGAATATCAAATTTAAAAAAAAAAATTAAAAATTACATTTTTTCAAA AAAAATTCTAAAATATTTCATTATTCAAAAAAAATTAAATATTTTCCAAA GAAAATTTGAAAATCAATGGTTATTATCAAAAAAAATTTTTTTTTTTTTG TAATTTCAAAAATTCATAGCTATTCACAAAAGGTAAATTTGAATGTAAAA AATTTAAAAATTCCAAAAAAAATTTCCAAAAAAAATTCTAAAATTAAATT TGTAATATAATATTTTCTAAATACAATAAATTCAGATATCAAATGTTTAA GAGAAAAGTTTCAAAAATCCATATTAATAAATAGAAAATTATTTTTTTTT TGGAAAAAATTTAAAAACTAAATTTTCAAGTAAAATCAACAATTCTTTAA TTTGTTGGGCATCCATCCCTTCTGGCCCACCTCAGTAGACGCACCTCCAT CTCCAAGGTCAACTGTGTCTARGTCACCTCATACCCCGTATTCATGGTTT CTCTACTTTCAAATTCTTTCATATAGTCCCAAAAATTGTATTGTGAACAA ATGAAGAAATATAATGTKAAGCCATATTTATCAACGTCTAGAGGTTACAC ATCACCTATAAAGTTTTTAAATTTCACATTGCATATTTATTTAAAATTTA TAACATTTTAAAAAAATATGCGCTTCTTCAGTTGCAAAAACTGCTAGGTT TGTAAATTCCAAGCACATCTTAACATGTAAGATTTTTTAGAGTTGGCAAC CGGAACAAAAGTTTTTATATTCTTCAGCTGTTACCATTATTCTGTATTTC TTGAAGAGAGAATAAATAAGTAGGGATGTAAATATTGGCTAAAAAGAATG TCATAAAAATGTGGTAATTATGGGAGATGATATTGACAAAGATCACAGTA TAGCCTAAAGTGAACCTTGCCCATTGATACGTAGGAATTTTAAAAATAAA GAGTAATAACAGGGTTTTTTTCTTGAAAATTTAATATTTGAAGTTTGTTG TAAAAAAAAAWATTGAAGTTTATTTTGAACAGTTTTGGATTTTTCKAATT TTTTRCCCAAATTTTATTTSAATAAAATTGAATATTTGAAATTTTTTTCC CAAAAATTTAATATTTYAAATTTATTTNCTATRAAATTRAATATTTSAAA AAMAATRTATACACGATTCTGCGGACGCACCTGACAAATAGAAAGSTAGT TTCTTAATCTAGGAAAACTATTTTTTTTAAACTTYTCTATTTTGACTAAT TTTTACTATTTTAAGGGAAGAATGTCATAAAGAACATAAAAAGTACGTGG TGTTCACGGTACAACAATATTGTATTATTCATTTCTTCATTAAAAATACT CCTTTTATAGAAAACTTGAATTAAAACTTTTGAAAGATTGTTTCTTAATC TAGGAAAGCTATTTTTTAAACTTTTATATTTTGACTGATATTTACCATTT TATGGGAAGAATGTTTTTCATTTATTGTAAAATTTAGAAACTTCACAAGG GATGCCCAACCTTTTATCAACAGGACTCTGCTTCTCCCAAAATTGCGGGC GGGGGGAGAAATACTAACTAATTTAAAACCCACTTGAAAAGTATTAATAT ATATGTATATCTTACAGACGACCTGACACGACCGATTTAAAGCATTGGAA AATGAAGCCTAAGTTCATGGGAAACATGGATGTTGTTAAAAGAATGACTT TTTCAGATTGGATCGTTTTTGCAGAGATGTCACGTGATATCGATAAGCAA GATATCAATATTATTTTGGATGGTATTGCACGAGAGTATCTCCCATCTTA TTCTATGGAGATGTCGGAACGTCAGAATGAGACAGATACACTCAAACTCA AATAACTCATCAATCACATTCAGTATTTAATGCATCTATATATTCGTATA GAACATGAGCTTTAATTTGTGTTTCTTTTTCATTATGTGTGTCCAAATTA TGTATCAAATTGTTTGTAATAGTCTGCTGTATTTCAATAACACTTTATT
back to top
Add to Basket