|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s242 | supercontig | LSalAtl2s242:937047..943714 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004665 >EMLSAP00000004665 ID=EMLSAP00000004665|Name=EMLSAP00000004665|organism=Lepeophtheirus salmonis|type=polypeptide|length=638bp
MSATMNAQKFSHYFGGSPILYVHGRQYPVNVSHASISQSDWLTSTLSTVF
QLHEQAPPQHDFLVFLTGQEEIENLAHTIRALSKDLQGSVKIFVLPLYSA
QASIMQQKVFIDSPPGSRKIILSTNIAETSLTIPGIRYVIDSCRVKAKVH
MASTGLDMLKVVRISKAQASQRMGRAGRQSEGHCYRLLTKREFDLLDEET
VPEILRCNISNVLLQLVASGVRDIRKFEFLQRPPPNAIEGAIRQLSLLGA
FKSDESQELTDIGIRLSKFPLDPKFAKAIISANELGCSEEVLTIVALLSS
ENIILTPPSNREECLKSREKFSSSEGDHISLLNIFRAFKASDNKKDFCKN
HHLNLRNLNFSIQIRSQLMDLCRNEDINVQSCANQGHLVREALADGLFMN
VAKLTVEGHYLTLDSRQQVKIHPSSVLFRCKPELVIFTEMSFIGSCFSSI
VDCFNGGDWNISSVAKQNNSSNHLPSGYQPIPDVILDTTTMGKLVLCQEA
VVVKNGSRLCGTGSVRSSTPISQSKAYWEVQVQQSGQWSCGLCTPSCDLN
KSLGNDQHSWVIDWESNIKSRNEVEYTLEQPVQEGDIIGFTYDHVELNFY
LNGNNLNCPILGIKGTVFPVLYGEKAFFVLFYKFMSGG back to topmRNA from alignment at LSalAtl2s242:937047..943714+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004665-700512 ID=EMLSAT00000004665-700512|Name=EMLSAT00000004665|organism=Lepeophtheirus salmonis|type=mRNA|length=6668bp|location=Sequence derived from alignment at LSalAtl2s242:937047..943714+ (Lepeophtheirus salmonis)
TCCGTATTTTTTCAAATGTAAATAAAGACAAACTTTGATAGTCAACACGA
GGTTATGGATCCATCCCCAGGATTCAATGCAAAGAGATCATTTTCTCATT
TGAAAAAGGAGACAAAACCTTGGATTAATGGTAAGAAAAAAATGAAGCTA
ATCAAGGAAATAGATCCTATGCTGAAGCAAAGGCGAGCTCTTCCCATCTT
TGGTGCTAAACCAAGGTTTTTGGAAGAGGTACGAAGGTAAATAAATAATA
ATTAAAAAATATTAAGTAACGTCTTAACTTTATTGTTGCTCCATGATTTT
TATATGAATAAACATTCTTTCAGATCAAATACTGTTATTTTACTTGGAGA
AACAGGCTCTGGGAAGACGACGCAAATTCCCCAATTTCTGCATGAAGCTC
GATTGGACTCTGAAGGACTRATAGGTATTACCCAGCCCCGGCGTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGTTGCTGCAATATCTGTATCCAAACGTGTAGCTCAAG
AGATGAATGTCAGTCTAGGAACACTTGTTGGCTACAAAGTTCGCTTCGAA
CAAGTGGCGGYGSCTAACTCCKTTACTAAAATTCTGTTTCAAACGGATGG
AATGTTGCTACGAGAGGCAATGCTGGGMAATTTGCCGTTAAAATATTTAC
ATACATCTAAAATACCTTCACATTATATTCTTGATATTTTTTAGATCCCA
ACCTAAAAAAGTATTCATGGATCATTTTGGATGAGGCTCATGAGCGTACC
ATCAATACAGATGTTCTTTTGGGCATAGTTAAAAGAGCCCAGGCACAAAG
GAAGTCTGCAGGAGAAAAACCTTTAAAAATAATTATTATGTCTGCGACAA
TGAATGCCCAAAAGTTTTCTCATTACTTTGGAGGTTCACCCATCCTTTAT
GTACATGGTCGACAATATCCAGTCAACGTAAGCCATGCCTCCATTTCCCA
AAGCGATTGGTTGACCTCTACATTAAGCACAGTATTCCAACTTCATGAAC
AGGCACCTCCTCAACATGATTTCCTTGTCTTTTTGACAGGTCAAGAAGAG
ATTGAAAATTTAGCACATACGATAAGAGCCTTGTCGAAGGATTTACAAGG
ATCTGTGAAAATATTTGTATTACCCTTATATTCTGCTCAAGCTTCTATAA
TGCAACAAAAAGTGTTTATTGACTCTCCTCCAGGATCTAGAAAAATTATA
CTATCAACTAATATTGCGGAAACTTCTCTAACAATCCCTGGAATTAGATA
TGTGATAGACTCTTGTCGAGTTAAAGCAAAAGTCCACATGGCAAGTACTG
GACTTGACATGCTAAAAGTTGTGAGGATTTCGAAAGCTCAAGCATCTCAA
AGAATGGGACGTGCAGGTCGACAAAGTGAAGGGCATTGTTACAGACTCCT
CACAAAGCGAGAATTCGATCTCTTGGATGAAGAAACAGTACCTGAGATTT
TGAGATGCAATATTAGTAATGTTCTTTTGCAACTTGTGGCGAGTGGTGTG
CGTGATATTCGAAAATTTGAATTCCTTCAAAGACCGCCACCTAATGCTAT
AGAAGGAGCTATTCGTCAACTCTCTCTCCTTGGTGCTTTTAAGTCTGATG
AATCGCAAGAACTAACAGATATTGGTATTCGTCTTTCCAAGTTTCCCCTT
GATCCCAAATTTGCCAAAGCTATCATATCTGCTAATGAGTTAGGGTGCTC
TGAAGAAGTATTGACGATTGTGGCCCTTTTATCAAGTGAAAATATTATTT
TAACTCCTCCATCCAATCGAGAAGAATGTCTTAAATCTAGGGAAAAGTTT
TCATCCTCTGAAGGAGATCATATCTCTTTGCTCAATATTTTTAGAGCATT
TAAAGCTAGTGACAATAAGAAAGATTTTTGCAAGAATCATCACCTAAACT
TAAGAAATCTCAACTTTTCCATCCAAATTCGAAGTCAACTTATGGACTTG
TGTCGGAATGAGGATATAAATGTTCAATCATGTGCCAATCAAGGTCATCT
GGTTAGAGAAGCTCTTGCCGATGGTCTTTTCATGAATGTTGCCAAATTAA
CAGTTGAAGGACATTACTTGACGGTGAGACTTGAGTTATTAGTCATTAAC
TTTACTTAAATTACTTATATTTTATTTTTTCATTTAGCTTGACAGTCGAC
AACAAGTCAAAATCCACCCTTCTTCAGTTTTGTTTCGCTGCAAGCCAGAA
CTAGTTATTTTTACGGAGTTAATAGCCACTCAAAAGTCTTATATTCGTGA
CTTATCACTTGTTGATGCCCAGTGGCTTTTGAAAAAGCAACCTGACTATT
TTAGAAAACATCACATAAAATTCTAATTATTTGCCATTACATGGCAGCTC
CTGATAATTAATTAATTAATAATGCTACTGCGATTATTATAAGTATTAAA
ACTTTTATATAGAGTTTTTGATTTTTTTAAGTTTATAAATCTAAGTAAAT
TAAGGTAAAAGTGTTAATAAAAATAATCTCGAATAGTGATAATACCAGTT
CAATTTGATATTTTTTTAATAGAACAGGTACAGTTCAAACTTTTGTTTTA
AGCTATTGTTGTTAATTACATTTTATGTAGATATATAATATATAAATGAA
ATCAAATGTCCTATATTAAAGTTATACATATGATAAAATTTTGATAAAAA
TATTGATTCATTAATAATTACTGTTATTAATCATTATGAATCCAATATAT
AATATAATATATGCAAATGCATTTAAAAAAGGAAAATAAATATACATTGG
CGAACTATAACAATATTTAAGAATTAGTATTAACATGGTTTCCAGATAGA
CAAACCATTAGGTTTATTTAAGGTTCAGTTTGAAATAATATCGTATTTAA
TTACAACTATGAAGAAAATCTTTTGAACATATTGATGATTGTAAGTATAT
ATTTAATGTTTTCTAAAAATAGAGCTTAATGTGTAAGTTATGATCCTGAA
ATCTAAACCGATGTGCTTCATCCCATCACAAAAATATTTGAGGAAACGTC
ATAATAAATACGTAGTGAAGGAAGTATAAAATAGTTAGAAAACGAATTCT
CTAAAGAGAGAGAGAAAAATAGGGGAAGAGATTGTTTTGTTGTTGTCATT
AACAGAATGTCATTCATCGGCTCTTGCTTTTCGTCTATCGTGGACTGCTT
CAATGGAGGAGATTGGAATATYTCGAGTGTAGCAAAGCAAAACAACTCTT
CCAATCACCTTCCTTCTGGATATCAGCCCATTCCAGATGTTATTTTGGAT
ACGACGACGATGGGMAAGTTAGTTTTGTGTTACGTTATTGTCACGTGGTT
TATTTCAAATTTTTATAGAATAAAGATTGTTGCATGACGCAGATTTTCAA
ATAATTATCTACAATTGAATTTATGCATAAGTTCTTGTTCATAATTAATA
TTCCTTAAAAGTTCTCTCATTTTTTATTTTATTTTTGCCATTTACGCCTC
TTTCATTTTCCATATTTTTAATTTACATTACTTGCATTCGTCTCAGGACG
GATCACTTAGCTCATGGATTTATGCTGGCTCAAATGTTTTACTCATAAAA
TCAGTCTTGATTTTACTGTATTATTTAATGATCTAATTCTCAATTAATGT
TAAAACTTCTTCATACATCGGAAATGTACACGTGGAAGCAATATTTCAAT
GCAATTAGGAAATCTGTTCATCAAATCATTGAATGATATGATTCATTCAA
TATTAAAAGTCAATAGGTGGATTGTTTATTTTCTTCTGTGATTGGATGTT
TGAGAATTAATCGATGTACAGCAATTAGATCGCTGAGTTAGTTCTAAACA
CGATACTCTCTTATTAATATTCTTCTATGTTATGACGTGAGAGTTTTTTT
ACTAAGATAATTGGTGCATCATTCTTCAATATTAAAACTATTTTTCCTTT
GAAGGGGATATTTTTGAGTGTCTCCCAGTGAGCAATCAATTAAATGAGTA
ATATTTCTTTATATACGCACTTCAAAAATTAAATACAGTAATGAAAATAT
ATTTTGCGAAATCAAAATATTAGATTCTGTTGGAGAAAAGGTGCTCGTAT
AATTTAAGAATCCCCGATAACATCAGACAATACTAATTGAACACAAATAC
CCCTTGCTCCATCTGTAGAGCGCATTCCCAAATTATCAATGAAACATTTT
ATTTTGATGAATGATAATACATTTTCTTGTGCAATGTTAGAAGGTGATCA
CTGATCATGATACTGTCAACTTAGGGTTAAGAGGAGTTGAATTTCATAAA
ATATTTGAAAAAATGGTCAATCCATCCAAAGCAATGAATACTTTATATAT
TTATAAACAAGGAAAATTTTACATGAACTATTTAGATATATCCTATAATG
AAGTCGGAGTTCACTAAATCGTGATCACGACTTCACAATATTTTTTTATG
AAATAAAATATATTGAATTTGTATGGTAGCCAAAAATTACAATCTAATTT
GAATTTAGATTAATTTTTTACTACTCAAAAATATATTTCAGTACAACCAA
AATAGATTATACAGAAAACAAGGACTAAATAAAAGGCAAATCACAAGATT
TAAAAAAAAATCACGATTTGGTTATATCATATTAAATAGTTTAATTATAG
GTATATGAATATTCAATCATTTATTCCTCTTTATTTCTTTTTAAGGCCAA
GAAGCAGTTGTAGTAAAAAACGGTTCTCGATTATGTGGTACGGGCTCAGT
TCGGTCTTCTACTCCTATTTCTCAAAGTAAAGCCTATTGGGAAGTCCAAG
TACAGCAATCGGGCCAATGGAGTTGTGGTGTACGTATAGAAAAATACCCA
TTAATATTCTTATCTCTGAATGAAACCTAGGTTAATAGAAATTTCTATTA
ACCTTGGTGTGACTCATACACGATTTATTTATTAGTGTTGAGTCTTAGTC
TGAGACAGATTTTTTTCAGTTTCGGTCTTAAGTCTTTTTTTTCTAGACCG
ATTTGAATTGAAATTTAAATACAGCCAGCGATTTGAAACCGTGGAACAGA
ATTTAAAACGTAGACCGATAAATTTAAAAAAAGTCATTTTTTTGTGTGTG
GAATCGGATCAAGATTTTTTTTTTTTGTAGACAGAATTTTATTACGAGAC
CAAAATAGGATCGAATTAGTTAAAGTTAGTCTCAAACCGATCTAGGATTT
ATACCGAAACCTAACTCTAATATTTATTTGTATTAAAAAGTACAATTTAT
GTGGACATAAGATGGAATAAGCCCTTGCATTATCTCTTGTTAACACTTGG
TATGCCTTGTCATCAATAAAAAATAGCAAAATGTTATTGATTTTTTGTAG
CAAGAGTTATCAGGGTTCCTAAGGGTTGAATAACACTATGTATCAACTTT
TGTCCTCATTTTGTTGTTCTTATTTAAGTCGTAGAACACAAAAATAACCA
TTGAAACATTCAATATATATATATATATCAAGTTTTGAAGGTATAATTGC
GATTCAGAACCATATTTAGACGTCAAATAACTATTAATATGAAAATCAAA
GTTAATAATTTATTATTAAAATTTAATTATTTATTACTTTATCATAATTA
CAATTCCTAAAAAAAGTGTTTAATGATTAATAAAATTGAGTAAAATTGAT
GATCTTATTTGGAGGCCATTATTATTATTTTTTTTAAATACTTATTATTA
TAGATAAAATTAAAGAATAAACCTAAAAAAGCTCGAATATGATAGATTTA
GTCAATTAATTTTCTGATGGAGTATTTAATCAATAAGCAATGTAATGTAG
GTTTGAGACTACGGACATCCCAAGCAGGGTTGGTTTTGCGTGAGTGAGGC
CCTTTTCTGTTAAAAAATTGGAAATTTGAAAAAATATTATCACTTTATTA
AAAAAGCGCCATTTTTTTACAAGATGAAAATATTCGAGCTGCCTTTTATA
ATAAAATTATCCTTCTTATTGTTTTGTCAATAGATTGTTTCGTATTTTAT
TTAATAACTTTTTTTAGAAAAAACATTTTCATGTCTATTTTCGTCTGGGC
GTGTATATTAAATTTTTACTACATTCTATTCAGCGTGAGAACTGGGGTAA
TTTCCCTTCAGTGCCCCTTAAAATCGGCCCTGATTCCAAGGCCTGAATTT
TTTTACATAGTGTAATTATTGTAATCATATTGTATAAAATATTTTTGCAC
TTTCATTGATTATTATAGCTCTGTACTCCTTCCTGTGATTTGAACAAAAG
TTTGGGTAATGATCAGCATAGTTGGGTCATAGACTGGGAAAGTAATATAA
AATCTCGTAATGAAGTTGAATATACTCTCGAACAGCCGGTTCAAGAAGGA
GACATTATTGTGAGTTTCATAGGGTTATCCTCTTTATAACTTCTATAATG
GTACATTTATATTTGTATAGGGTTTTACATATGATCATGTGGAGCTCAAT
TTCTACCTCAATGGTAATAATTTGAATTGTCCCATATTGGGTATCAAAGG
AACCGTTTTTCCAGTTTTATATGGTGAGAAAGCGTTTTTTGTATTATTTT
ATAAATTCATGTCTGGGGGTTAATTTCAGTATTTTCAGACATTTCATTTT
GATATAATTTCTTCATTAGTTCATTAAAGTGTACATTTGTAAAAGTGTAG
CACAAATACACTAAACTG back to top
|
