EMLSAT00000004666, EMLSAT00000004666-700513 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004666
Unique NameEMLSAT00000004666-700513
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s242supercontigLSalAtl2s242:969444..971852 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004666 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004666EMLSAG00000004666-687432Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020372EMLSAE00000020372-729300Lepeophtheirus salmonisexon
EMLSAE00000020373EMLSAE00000020373-729301Lepeophtheirus salmonisexon
EMLSAE00000020374EMLSAE00000020374-729302Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780194auto780194Lepeophtheirus salmonispolypeptide
EMLSAP00000004666EMLSAP00000004666Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004666

>EMLSAP00000004666 ID=EMLSAP00000004666|Name=EMLSAP00000004666|organism=Lepeophtheirus salmonis|type=polypeptide|length=316bp
MVDSRDIVVRYTTQSIAKAGFGVEANCFDLSVKEPLFMEMVNIITGRKGK
KWRQVYMFLCFLTFPNWFTKHSPISLLDPGSKSFFINMVKSSIENRKKSK
VSRGDFVDLLLAEFYKNTSIKQDEIQNGEEAPQFEFDAKINIQDTKVTFD
EQELELVLVANVLILLMAGFDTTSSMMTVMFVYLANHPIVQEKLFEEISG
VIHEKNNDTLFLFPNDAFNLCKDHYEEPEVFNPNNFTEENKIKRSTYSFL
AFGQGPRNCIGMRFAMLQMKTCLYRLVYKYKFLRNEKTVDEILVAPNELS
PDITGGSWVTLKKRRA
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mRNA from alignment at LSalAtl2s242:969444..971852+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004666-700513 ID=EMLSAT00000004666-700513|Name=EMLSAT00000004666|organism=Lepeophtheirus salmonis|type=mRNA|length=2409bp|location=Sequence derived from alignment at LSalAtl2s242:969444..971852+ (Lepeophtheirus salmonis)
ATGGTCGATTCTCGAGATATTGTAGTTAGATATACTACTCAAAGTATTGC
AAAGGCTGGGTTCGGTGTAGAAGCGAATTGCTTCGATTTAAGTGTGAAAG
AACCATTATTCATGGAAATGGTCAACATCATTACTGGTAGAAAAGGGAAA
AAGTGGAGACAAGTCTACATGTTCCTCTGCTTTCTTACCTTCCCCAATTG
GTTTACCAAACATTCACCTATATCATTATTGGATCCAGGGAGTAAGAGTT
TTTTTATCAACATGGTAAAGTCATCCATTGAAAATCGAAAGAAGAGCAAA
GTCTCGCGAGGAGACTTTGTGGATCTCTTACTCGCAGAGTTTTATAAAAA
CACAAGCATCAAACAAGATGAAATACAAAATGGAGAGGAGGCACCACAAT
TTGAATTTGATGCAAAGATCAATATCCAAGACACAAAAGTAACGTTTGAT
GAACAAGAGCTGGAACTTGTTTTGGTTGCAAATGTTCTTATACTTTTAAT
GGCTGGSTTTGATACGACTTCTTCCATGATGACCGTCATGTTTGTATATC
TAGCAAATCATCCCATTGTGCAAGAGAAATTGTTTGAGGAGATAAGTGGA
GTCATTCATGAGAAAAACAATGGTGATGAAAAGTTAAACTATATGGACAT
TAGAAGCTTGAAGTACCTGGATATGTTTATTCATGAAGTTCTTCGACATT
TCCCCTTTATAAATTTGGAGAGGACTTGCATAAAGAAATATAAAATGCCA
GGAACGGATTTGGACATTGAAAAAAGTAAGCAAACATAATAGATATGTAA
GGAAGATCGGCGCACTTTCTTCCAACATTAAGAAATCACAATCACAAAAT
TTATATTACAATTGTAGAAGTAATTAGAGCGTAAAAGTATGACGATATTT
GGCGTGTGATAATCTTTTAAGTTGGGCAATCAAAATAGTGTTTTTTTACT
TTTGAATGCGTTTATGGTTATTATTTTATATTTGTAGAGGGAACATCTAT
TAGATAAAATAATCACAAATGCGTGACACACGAAGAGAAACACTTAGGAT
TTCTTTCAAATGCAAGTTCTTCTAGGATTAAAAGTAGAATTGAAGATACA
CATTGGGGTAATTACTGCAAAGGCCTTAGCCCAATAGTGAGTACGATTTG
TCTTTTTTTTTTCTTCATCTCATAGCTGCTCTTAATTATTTCAATAAAAT
GTCATGGAAGCTCAGTGTCTATCTTCGAATTTCAGTTGATTTAAAAAAAA
TTAAAACAAACAAAAAACATTGAAAATTAATACAAAATTACAATAATACA
AGTTGTTTTGTGCAATGACAAGGCAACAAGCATGCAAACAATMCCTCCGC
CACTTCACAAAGCATTAAGGCCAAAAACTTAAAACTGAACCCCAGACCCA
GGAGTTGATTAAGGCTACTTCGAAGGCACCAAGCAGGCTAAAAATCATGG
GCCTAGAGGTTAATTTTGAAGCATTAGCAAGGGAATTAAATGCTTTGTCT
TCACAAAGCATGTTGGCGGKGGTTTTTAACCTGTATGGTGTTACTGAAGT
ATTTTTAAATGACTCATGGGCTTTGAAAGTTTGAAAGAGCCTAATTGTTT
TGAGAAGTGGCATCATTAGTTTTTAACCTGCTTGATGGCTCTGCCATGGC
ACAAAACAAATTTTAGGGAACCTGTATTCCGATTATGTTAGTAAATAATG
GAAAAATTTCCTTTGGGAATTTTCCACACTACCAATTTTCTCCTGCTCAA
TTTTTTTCAATGAGAATTGTCTTTATTGTAATTTTCTTTATGTCAACTTT
GCATTTACTATTATCTCCATGCTAATTTTCCGTGTACTCGAATATAGTGT
TAAATTTTGACGGGTCTAGTAATTGAGGCAAAAAGTAAAACTGTTTCAAC
TCATTCCGATATCTCTTTTCACTTCGATTCTATCCATATCTGTTTTTCCA
GATACGCTCTTTTTATTTCCAAACGATGCTTTTAACCTTTGTAAAGACCA
CTATGAAGAGCCTGAGGTATTCAATCCAAACAACTTTACGGAGGAAAATA
AAATAAAAAGGAGTACGTATTCCTTCTTAGCATTTGGACAAGGACCAAGG
AACTGCATAGGAATGAGATTTGCAATGCTTCAAATGAAAACATGCCTATA
CAGGTATTTGATAATCTCATCTTCTGATGATTATGTTATGATTATTCATT
TTTCAGACTTGTGTACAAATATAAGTTTTTAAGAAATGAAAAAACAGTGG
ATGAAATCCTGGTTGCTCCAAATGAACTAAGTCCAGATATAACTGGAGGA
TCTTGGGTTACATTAAAAAAACGAAGAGCTTAAGATTTAAAAAAATATAT
TATTTTTTTCTAGATTACATATTTTATTCGTTTTAAATCATTATTCCCGG
GGTTTCCCA
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