EMLSAT00000004668, EMLSAT00000004668-700515 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004668
Unique NameEMLSAT00000004668-700515
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2430supercontigLSalAtl2s2430:6603..7564 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004668 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004668EMLSAG00000004668-687434Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020376EMLSAE00000020376-729304Lepeophtheirus salmonisexon
EMLSAE00000020377EMLSAE00000020377-729305Lepeophtheirus salmonisexon
EMLSAE00000020378EMLSAE00000020378-729306Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768638auto768638Lepeophtheirus salmonispolypeptide
EMLSAP00000004668EMLSAP00000004668Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004668

>EMLSAP00000004668 ID=EMLSAP00000004668|Name=EMLSAP00000004668|organism=Lepeophtheirus salmonis|type=polypeptide|length=171bp
MVENRTGLIVNISSGGGLKYLFNVPYGIGKAACDRMAADCAVELKNKNVT
MVSIWPGPVKTEEIINRVLENPEARNSVKRXFESGESTEFTGMAIVKLAS
DPNKIQCTGKILLTSFLARKYDIKDLNGLITGDMFSIKNILQVRGHNWIS
SLIPSFITIPTIFIHYLSNKF
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mRNA from alignment at LSalAtl2s2430:6603..7564+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004668-700515 ID=EMLSAT00000004668-700515|Name=EMLSAT00000004668|organism=Lepeophtheirus salmonis|type=mRNA|length=962bp|location=Sequence derived from alignment at LSalAtl2s2430:6603..7564+ (Lepeophtheirus salmonis)
TCTTTGTACTGTATATGCTTCAACGTAGGTCTATATTTTTAGAAAAATTA
TCTCATTCTCAAAAAATTGGATCATACTGATTTATGACTGAGTGTATTTA
AAGGATCATGGTAGAAAATAGAACTGGCCTAATTGTGAACATCAGCTCTG
GTGGTGGACTCAAGTATTTATTCAACGTACCCTACGGAATTGGTAAGGCA
GCATGTGATCGAATGGCTGCTGATTGTGCTGTAGAACTTAAAAATAAGAA
TGTTACAATGGTTTCTATTTGGCCAGGTCCGGTGAAAACTGAGGAAATAA
TAAATAGGGTTTTGGGTTCGTATACACGCAAGTTACATCAAAGATGCATT
TAGTTTACTAATGATATGTTCAACACTCTAGAAAATCCTGAGGCACGGAA
TAGTGTCAAAAGAARGTTTGAATCAGGAGAATCAACAGAGTTCACGGGGA
TGGCGATCGTCAAATTAGCATCAGATCCTAATAAAATTCAATGTACAGGG
AAAATTCTATTAACAAGTTTTTTGGCAAGGAAATATGATATAAAGGACTT
GAACGGTTTAATAACAGGAGATATGTTTTCAATTAAAAATATTTTACAAG
TACGTGGCCATAATTGGATTTCATCCCTGATACCATCCTTCATAACCATT
CCTACGATTTTCATTCATTATCTATCCAATAAATTTTGAAAAGTGTATCA
GAGAGAATCAGTGCAATTTACTTCCTTTTATATGTATAATGAATTAAATA
CAAATAATAGTCCTAAATCCATGATTTTTGTTTCTTGGTCCAAAATGTTA
TTTTGTTATCAAAAATTTTAAGTAACTCTATTTTGCAAATAAAGTTATAA
ATTACAAAAATTAGACTAGTTATGTTTGTCCCCCGTTTGAAGAACGTGTA
GTAAAGAATCTCTATATACAGGCAGTTAAAATGTAGCATACAATATGTGC
ACTCACCCCATG
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