EMLSAT00000004682, EMLSAT00000004682-700529 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004682
Unique NameEMLSAT00000004682-700529
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s245supercontigLSalAtl2s245:228085..228937 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004682 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004682EMLSAG00000004682-687448Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020427EMLSAE00000020427-729355Lepeophtheirus salmonisexon
EMLSAE00000020428EMLSAE00000020428-729356Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774898auto774898Lepeophtheirus salmonispolypeptide
EMLSAP00000004682EMLSAP00000004682Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004682

>EMLSAP00000004682 ID=EMLSAP00000004682|Name=EMLSAP00000004682|organism=Lepeophtheirus salmonis|type=polypeptide|length=198bp
MSSLKLQKRLAASVMKCGKNKVWLDPNEINEIANANSRYNIRKLIKDGLV
IKKPVAVHSRSRVRENTKARRKGRHTGYGKRRGTKDARTPQKMLWMKRMR
VLRRLLRRYREAKKIDSHLYHELYLKAKGNVFKNKRVLMEFIHKKKAEKA
RSKMLLDQAEARRSKVKEARKRREERILNKKKEMLQAYQXEEAAAAKK
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mRNA from alignment at LSalAtl2s245:228085..228937-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004682-700529 ID=EMLSAT00000004682-700529|Name=EMLSAT00000004682|organism=Lepeophtheirus salmonis|type=mRNA|length=853bp|location=Sequence derived from alignment at LSalAtl2s245:228085..228937- (Lepeophtheirus salmonis)
ATGAGTTCTCTCAAGTTACAAAAGAGGCTCGCAGCCTCGGTAATGAAATG
CGGCAAAAACAAGGTTTGGTTGGATCCTAATGAAATCAATGAGATTGCCA
ACGCCAATTCCAGATATAACATCCGGAAGTTGATCAAGGACGGTTTGGTT
ATCAAGAAGCCCGTTGCTGTCCACTCCAGGTGATAATTAGATTTTGTATA
TAGCTTAATGAGTCAATTACCCATTGATCTGGGCAAGACACCGCTGTCTT
TTCCATCAGCGATGTAGTCTAATCTTCTTTGGGTTATAATAAAATGGGTC
GTGTTAATCCCGGACCGCATGACTTATATGCGGCCCGATTCAATCTCCCC
AACAATTCTAAAACTATTTTGATTAAGCGCCTCCTAATTGTGCTTTGATA
ATGAGACTCAACTAATTATTGTCCTAATTGAATAGATCCCGTGTGCGTGA
GAATACCAAGGCCCGCAGGAAAGGTCGTCACACCGGTTATGGTAAGCGAC
GTGGTACGAAGGATGCCCGTACTCCTCAGAAGATGCTTTGGATGAAACGT
ATGAGAGTTCTGCGTCGATTGCTCCGTCGCTACAGAGAGGCTAAGAAGAT
CGACTCTCATCTCTACCACGAGCTGTATTTGAAGGCTAAGGGTAATGTTT
TCAAGAACAAGCGCGTCTTGATGGAATTTATCCACAAGAAGAAGGCCGAG
AAGGCTAGATCCAAGATGTTGCTCGATCAAGCTGAGGCTCGTCGTAGCAA
GGTTAAGGAGGCACGTAAGCGACGTGAGGAAAGAATCCTTAACAAGAAGA
AGGAGATGCTTCAAGCTTATCAAGASGAGGAAGCAGCCGCCGCTAAAAAA
TAA
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