EMLSAT00000004684, EMLSAT00000004684-700531 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004684
Unique NameEMLSAT00000004684-700531
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s245supercontigLSalAtl2s245:255673..259068 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004684 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004684EMLSAG00000004684-687450Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020433EMLSAE00000020433-729361Lepeophtheirus salmonisexon
EMLSAE00000020434EMLSAE00000020434-729362Lepeophtheirus salmonisexon
EMLSAE00000020435EMLSAE00000020435-729363Lepeophtheirus salmonisexon
EMLSAE00000020436EMLSAE00000020436-729364Lepeophtheirus salmonisexon
EMLSAE00000020437EMLSAE00000020437-729365Lepeophtheirus salmonisexon
EMLSAE00000020438EMLSAE00000020438-729366Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775384auto775384Lepeophtheirus salmonispolypeptide
EMLSAP00000004684EMLSAP00000004684Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004684

>EMLSAP00000004684 ID=EMLSAP00000004684|Name=EMLSAP00000004684|organism=Lepeophtheirus salmonis|type=polypeptide|length=369bp
MGKEMSIRRKFGSTSAEMTARNEDDEIRGEEEMKLVIEKEKEPSKMGLFS
FIGLSIVLFQVICEVSKQISNYSIQYYNNGKYPVASTAMVVSTEFLKLIF
TIFRIDSSLPHFNFMTLKKSLKYMIPSILYAFNNNIYLYGLTLVPPPIWL
ILCSMRTLVTALIYRVFLKRAISTLQYLGIGGIVSSLVIAKVPDLMFHSI
NSIPLFAIGLAFLASCISAFAAIFTELLFKSSKSNDNSGHVDSFYIKQFW
LYLYGLVISFLIHLATNPSYTIFSYSSDIINMDRSVLIFYIAALSCGSIG
GITVASILKYLDNIVKEYTGSFGNVITAIISSCLFPDKFQFTIFVIISLA
FLIMGILLYETQKPKNIHK
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mRNA from alignment at LSalAtl2s245:255673..259068+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004684-700531 ID=EMLSAT00000004684-700531|Name=EMLSAT00000004684|organism=Lepeophtheirus salmonis|type=mRNA|length=3396bp|location=Sequence derived from alignment at LSalAtl2s245:255673..259068+ (Lepeophtheirus salmonis)
CGAATATGAAACCAGTACGCTAGCTACATCTTAGTGTTTATGGGAAAAGG
TAGTTATAAAATACCTTTTTCACATTTATCGTAGACATAATGAATTTTTT
CCACTACACTACTAATTATGCTTTTATTATAAGAAAAAAATAATTAATAA
TAGTACTCAGTGATGAAATGAAAATGGCATGCAATCAATCTGTCGACTAT
ATTATTAATAAATTAATCATCCTTCGATCCTCTCTCTTCCTTATGTATAT
GTTTAAGATTTACAATATGTATATAGTACATCCTGAGATGATTCCTAACT
TTAACGGATAAAATGTTTGATCTAAACTTCATTTTTTTAAATTTATTGTA
ATTGACTTAAAGAAAAATGTTAAAGGTAATATTTGTAGTAATCCTAGGTT
GAAACACTTTCTCTACGTAAGTTTTTTTTAATAAAAAAATTTTTAATTTT
AGTTCAAAATATTGTTTTCTTGGAAGATATATTAATTGCAGCACGTGACT
TGTCATAGATTTTCCGACGCTGATGAATTAAAAAGAGAGTAAAATTGTAC
AAAGTAAATTAGGTTTTGCCATTAGATTTTTTAAGCAGAAAAAATACACT
TCTCCCTACATGAGGTTAAGTTAATTCATTATCAGTTAATTTTGTTCAAT
ATATTTGTACAAGTTGTAATTCTTATCATAACTCATCATAAGTCATAACA
TCATTTACTTATGACTCATAAGTAAATTGTATGTCTCGCACGCTTAAAAA
TACCCGCATCTTCACTTTTTAAAGTCATATTTAAAATCTAGCATACTGCT
GGCTGCATGTAAATAAAATCTACCTTTAAAAAATAATGTGTGAGCAAGAG
AAGGGACTGAGCCGACCATCTGCCGAATTGCGTTGAAGAAGAATACTGAA
TGAATAAATTATATTAGAAAAATAAAGAAGGAAAAATATGACGTCATGAT
TAAAATAAATAACTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAGGTCATTCAATTTTATGTTGAATTGATCTCGTAGCA
KCATTATCTAACTCATAAAATASARAYKGAAATTATATGGGAGAATTGAT
CAATTAATGTTTAATTCTAATTATATATAATATATATTTTTATTTTGGAA
TAGAAATGTCTATTAGAAGAAAATTTGGATCAACATCTGCTGAAATGACA
GCAAGGTAAGTAACTCTTTATCTAATGCTGACAACGTGATGTATATTTTC
TTCACATGTTTCACTATCTAAACAGTATACATTGATAAATGAGAATTATA
TTATAATAATACGTCTATTCATAACTATCATTACTACTAGGAACGAGGAT
GATGAAATTAGAGGGGAGGAAGAAATGAAGCTGGTTATCGAGAAGGAAAA
AGAGCCTTCTAAAATGGGCCTCTTCTCTTTCATTGGCCTCTCCATTGTCT
TATTCCAAGTGATTTGTGAAGTGTCAAAGCAAATTTCCAATTATTCGATA
CAATATTACAATAATGGGAAATATCCCGTTGCCTCTACGGCCATGGTTGT
CTCAACAGAGTTCCTCAAGCTTATTTTCACCATTTTTAGAATCGACTCCA
GCTTACCTCATTTCAATTTCATGACATTAAAGAAATCACTCAAGTATATG
ATACCCAGCATTCTATATGCGTTTAATAACAATATCTACCTCTATGGACT
AACTCTTGTTCCACCTCCTATTTGGCTTATTCTCTGTTCTATGAGAACCC
TGGTCACTGCCTTGATATACAGAGTATTTGTCAAATATTCATTTCTTATA
ATTATTATGATCACTGTTTTATTATGTACACAGGTATTTTTGAAGCGTGC
GATAAGTACGTTGCAATATTTAGGTATTGGTGGCATCGTTTCTAGTCTTG
TTATAGCCAAAGTTCCGGATTTAATGTTTCACTCCATTAATAGCATCCCT
TTATTTGCTATAGGTCTAGCGTTTTTGGCCTCATGCATTTCTGGTAATTG
ACTAATTATTATATTATGAAAAATATATATTTTCTTGTATACTTTTATCT
TCCAATTATCATATTAACTACCTACATCTTATGTGTTTATATAATTTTGA
TTTTTTTACAGCCTTTGCAGCTATTTTCACTGAACTACTTTTCAAATCTT
CTAAAAGTAATGACAATAGCGGACACGTGGACTCATTTTATATCAAACAA
TTCTGGCTTTATTTATACGGATTAGTGATCTCTTTTTTAATTCATTTGGC
CACCAATCCATCTTACACAATCTTTTCATACTCCTCTGATATAATTAGTA
AGTGACATATTAGTTATATATTCATACAAATATTCGGTCATCTTATTTGT
TTTATCACAGATATGGATCGATCTGTTTTGATATTTTATATCGCAGCCTT
ATCATGTGGATCCATTGGTGGAATAACCGTTGCCAGTATATTGAAATATC
TCGATAATATAGTAAAAGAGTACACCGGGTCTTTTGGAAATGTGATAACT
GCTATCATAAGCAGTTGTCTCTTTCCTGATAAGTTCCAATTTACAATCTT
CGTTATTATTAGTTTAGCATTCTTAATTATGGGAATCTTATTGTATGAAA
CTCAAAAACCCAAAAATATACATAAATAACTGCAAACAAGTATAATTTAC
CTACGTCAATTAATTTTATAATCTATCTAACTAATTTGTAACTTAGAGCT
GAAACACTCAATTTTATTTTTACTTGTATTTTAGTCGATGAATCAATTAG
TAGCTAAGGGTGCTCAATACTGTCGACGTTTCGTAAAAATACATTAAAAG
CAACCCTAAAATAAAGATAGTGTACAATGAAATACAATTATAAATCAAAA
TACGACACAATCAGAAATATTAAAGGAGATTCTGATTCCTGTTTAAAATT
TCGTAAAACTGTAAAGCGAATAAAATTATGTTGGTTCTATAGAAAT
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