EMLSAT00000004688, EMLSAT00000004688-700535 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004688
Unique NameEMLSAT00000004688-700535
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s245supercontigLSalAtl2s245:535864..537578 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004688 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004688EMLSAG00000004688-687454Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020453EMLSAE00000020453-729381Lepeophtheirus salmonisexon
EMLSAE00000020454EMLSAE00000020454-729382Lepeophtheirus salmonisexon
EMLSAE00000020455EMLSAE00000020455-729383Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778450auto778450Lepeophtheirus salmonispolypeptide
EMLSAP00000004688EMLSAP00000004688Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004688

>EMLSAP00000004688 ID=EMLSAP00000004688|Name=EMLSAP00000004688|organism=Lepeophtheirus salmonis|type=polypeptide|length=527bp
MALLTKILSGEIQHLIVLIAFLTLLYILKHLKKSFKDLPPGPIGYPIVGI
IPLIKKEFHLLLFDYAMKFGKIVSLKMGGETVVVLSDYQTIKKAFSCKYF
SARPKTELSQLLGGYGIVNSEGPLWKTQRKYLLNQKLGMKHWKSGAGSLE
QIESVVSREVQSFLYTLENDYSNTFVNLTPLFNCAVSNVICSIIXSRRFR
YQDPKFQRFMFLFDEGFRLFTMTGAMTFLPFLKVLPGISDTCTKLRQNRE
EMIAFVREIISEHRQELDPQNPKDLIDSYLVQESTPDQFFEDYDPEQQLE
QIILDLFSASVETTRTSLLWAIVFMLHNPKILSKVRDELNSVVGEDNLPQ
LSDMIKLPYTRATLYEIMRRSSVVPMGTTHATDREVQFEGFVLPQNSHVI
PLIHAVHMNPKNWENPEEFRPERFINKEGVLFKPEHFMPFGVGQRKCLGD
RLAEQEFFLFFTSLVHVFDLGNNPEQTMPSLRGTAGVTVTPSEFSVHIKL
RNKTALDFSNKESSSYCTKLSSDRIYG
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mRNA from alignment at LSalAtl2s245:535864..537578-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004688-700535 ID=EMLSAT00000004688-700535|Name=EMLSAT00000004688|organism=Lepeophtheirus salmonis|type=mRNA|length=1715bp|location=Sequence derived from alignment at LSalAtl2s245:535864..537578- (Lepeophtheirus salmonis)
ATGGCTTTACTTACAAAAATATTAAGCGGTGAAATACAACATCTGATTGT CCTCATTGCCTTCCTCACTCTTCTCTATATCCTCAAGCATTTAAAAAAGA GCTTTAAGGATTTACCTCCTGGACCCATAGGCTATCCCATCGTCGGAATA ATTCCTCTCATTAAGAAAGAATTCCATCTTCTCTTATTTGACTACGCCAT GAAGTTTGGAAAAATTGTTTCACTCAAAATGGGAGGTGAAACCGTCGTAG TTCTCTCAGACTATCAAACTATTAAAAAGGCCTTTTCTTGCAAATACTTT TCTGCACGTCCAAAAACAGAGTTATCCCAGCTTCTGGGGGGCTATGGTAA GTCAATATATTTAATTAATAACATAATTCAACTCTAATCTTGTACTTCCA TAATTATAGGGATTGTTAATAGTGAAGGTCCACTTTGGAAAACCCAAAGG AAATATTTACTCAATCAAAAACTTGGAATGAAGCATTGGAAATCTGGGGC TGGAAGTCTTGAACAAATAGAATCTGTTGTGTCAAGAGAAGTCCAATCTT TTCTCTACACACTTGAAAATGATTATTCAAATACGTTTGTGAATTTAACT CCTCTTTTCAACTGTGCCGTATCCAATGTGATCTGCTCAATCATAANGAG CAGACGCTTCCGTTACCAAGATCCTAAATTTCAAAGGTTCATGTTCCTCT TTGATGAAGGTTTTCGTCTCTTTACCATGACTGGTGCTATGACATTCCTT CCCTTCCTTAAAGTTCTTCCTGGCATCTCTGATACTTGTACAAAACTCCG TCAAAATAGAGAAGAAATGATTGCTTTTGTAAGAGAGATCATCTCTGAGC ATAGACAAGAGTTGGACCCTCAAAATCCTAAAGACTTGATCGACTCCTAT CTTGTACAAGAGTCAACGCCAGATCAATTTTTTGAAGACTATGATCCAGA ACAACAATTAGAGCAAATAATCTTGGATCTCTTTTCTGCTTCAGTTGAAA CGACAAGAACCTCTCTCCTCTGGGCCATTGTTTTTATGCTTCACAACCCA AAGATATTATCTAAAGTAAGAGATGAACTCAACTCTGTTGTTGGAGAAGA CAATTTGCCACAATTGAGTGACATGATCAAGCTTCCTTATACTCGAGCAA CCCTTTATGAAATCATGAGGCGATCCTCAGTTGTACCCATGGGAACTACA CATGCTACAGACAGGTAATTACCGGTCAAAACTTTAGTCTATTTGATCAT ACATTCATTTTTTATATTTTTTATTCTTACAGAGAAGTTCAATTTGAAGG TTTTGTTCTTCCTCAAAACTCTCATGTGATTCCTCTCATTCACGCAGTTC ACATGAATCCCAAAAATTGGGAAAACCCTGAAGAATTCCGACCTGAAAGA TTCATTAATAAGGAAGGAGTTCTATTTAAACCTGAACATTTTATGCCTTT TGGGGTAGGTCAACGCAAATGTCTAGGAGATCGACTCGCGGAGCAGGAGT TTTTCCTTTTCTTCACATCCCTTGTTCATGTATTCGATCTCGGAAACAAC CCAGAACAGACAATGCCAAGTCTTCGGGGAACTGCTGGTGTAACCGTAAC CCCAAGCGAATTCTCAGTACACATCAAGTTAAGGAACAAAACTGCTTTAG ACTTTTCAAACAAGGAGTCCAGTTCATATTGTACTAAACTGTCATCAGAT AGGATATACGGCTAG
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