EMLSAT00000004689, EMLSAT00000004689-700536 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004689
Unique NameEMLSAT00000004689-700536
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s245supercontigLSalAtl2s245:55693..57885 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004689 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004689EMLSAG00000004689-687455Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020456EMLSAE00000020456-729384Lepeophtheirus salmonisexon
EMLSAE00000020457EMLSAE00000020457-729385Lepeophtheirus salmonisexon
EMLSAE00000020458EMLSAE00000020458-729386Lepeophtheirus salmonisexon
EMLSAE00000020459EMLSAE00000020459-729387Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770851auto770851Lepeophtheirus salmonispolypeptide
EMLSAP00000004689EMLSAP00000004689Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004689

>EMLSAP00000004689 ID=EMLSAP00000004689|Name=EMLSAP00000004689|organism=Lepeophtheirus salmonis|type=polypeptide|length=445bp
MLRVTIISCLLLNFALAIPHPFAEPGRNCNIQCSTVNEQQCSTVNEQQCS
TTTERQCSNVNEVVNENKQCSTVNEQQCRTVNEQQCSTVNEQQCSTVNEQ
QCSTTYSTVNRQQCSTVNQQKCSTTYETVCSNGGYGRYNRSPIFFGKKNK
GNSRDGRTYGRGGRGGCRSVPRQQCVNVPSQQCRNVATSVPRQQCKNVPR
QQCRSVPRQSCRTNPRQVCSTIPRQQCSNVPKQQCRSVPKQQCRSVPRQS
CRSVPRQSCRSVPKQQCRSVPRQQCTNVPRQQCSNVPRTVSRQQCTNVPK
QQCXSVPRQXCRSVPRQSCRNVPEEQCSNVPRQSCRSVPKQQCRNVPRQQ
CTNVPRQSCRNVPQEVCNNVPRQVCNNVPRQSCRNVPEQVCNNVPRQSCR
SVPRQSCRNVPRQSCKNVPQQVCNNVPRQSCNNVCQDVFWCKVCN
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mRNA from alignment at LSalAtl2s245:55693..57885+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004689-700536 ID=EMLSAT00000004689-700536|Name=EMLSAT00000004689|organism=Lepeophtheirus salmonis|type=mRNA|length=2193bp|location=Sequence derived from alignment at LSalAtl2s245:55693..57885+ (Lepeophtheirus salmonis)
AGACGAAAAATACCTATAAAACCAAGCAACAACTTTGTTGTATTACTCAT TCATCTAGCAAATCAAGTCAAGCAAGGAGTTCAACTTATAAAGTAGAGTC TACATTAATCAACAACATCATATAAATACAATTTCTTAAGATTTAAAAAT AAAACAGCAGTTTTTATTTTCTATATCTTAAAAAAACTTCTGTAGACTCT TACAATCTTGATACTCTTGAAGCTTTTTAGTATTAAAATGCTCCGGGTAA GATTTTCAGTCATTTGTTTACTTAAAGAAATATAGAATCGTTTATTTATA AATTTAGGTGACTATTATAAGCTGTTTATTGCTCAACTTTGCATTGGCAA TCCCTCATCCATTTGCTGAGCCAGGAAGAAATTGTAATATTGTTAGATCA TCTACCAACACTGGACAATGTTTCAATGAACCTGAATGTAACCAACAATG TAATACTGTCAATGAACAACAGTGCTCCACTGTCAATAAACAACAGTGCT CCACTGTAAATGAGCAACAATGCTCAACAGTCAATGAGAACCAGTGTTCT ACAGTCAATGAACAGCAGTGCTCTACTGTCAATAAACAACAGTGCTCAAC AGTCAATGAGCGAAAATGTAACACTGTCAATGAACGACAATGTAACACTG TCAATAAACAACAGTGTTCTACRGTCAATGAACGTCAATGCTCTACTGTC AATGAACAAAAATGCTCAACGACAACTGAACAACAATGTTCWACCGTRAA TGAACGTCAATGCTCCANNNNTTAACAAGCAGCAATGCTCTACAGTCAAC GAACAACAATGTTCAACCGTTAACGAACAACAATGCTCAACAACTACTGA ACGTCAATGCTCGAATGTTAATGAAGTAGTCAATGAGAACAAGTGTACCA CCGTCAATGAACGTCAATGCTCTACWGTCAATGAACAACAATGCTCAACA ACRACKGAACAACAGTGTTCAACAACAACCGACCAASAATGCTCCACWGT SAAYGAACRRCAATGCTCYACCACCACAAGCCAAGAATGNTTCCACTGTA AACGAAAGACAATGCTCTACCGTTAACGAACAACAATGCAGAACTGTCAA TGAACAACAATGTTCCACTGTCAATGAACAACAATGCTCCACTGTTAACG AACAACAATGCTCCACTACTTACTCTACTGTCAACCGTCAACAATGTTCC ACAGTTAATCAACAAAAATGTTCAACTACTTATGAAACAGTTTGTTCCAA TGGAGGCTACGGACGATACAAYAGATCTCCTATCTTCTTTGGCAAGAAAA ATAAAGGAAACAGTAGAGATGGAAGAACTTATGGTCGTGGAGGCCGTGGA GGATGCCGATCTGTTCCAAGACAACAATGTGTTAACGTACCATCTCAACA ATGCAGAAATGTCGCCACTTCCGTTCCAAGACAACAATGCAAAAATGTTC CAAGGCAACAATGTAGATCTGTCCCTCGTCAAAGCTGTCGCACTAACCCC AGACAAGTTTGCAGTACTATTCCCCGTCAACAATGCTCCAATGTCCCCAA GCAACAATGCCGATCTGTTCCAAAACAACAATGCCGCTCTGTACCAAGAC AATCATGCCGATCTGTACCAAGACAATCATGCCGCAGCGTTCCTAAGCAA CAATGCAGATCTGTTCCAAGACAGCAATGTACTAATGTTCCACGTCAACA ATGCTCCAATGTTCCAAGAACTGTCTCACGTCAACAGTGTACAAATGTTC CCAAACAGCAATGCAGWTCTGTTCCAAGACAARCCTGCCGTTCCGTTCCC AGACAATCATGCCGCAACGTACCAGAGGAACAATGCAGTAATGTCCCAAG ACAATCATGCAGAAGTGTTCCAAAGCAACAATGCAGAAATGTTCCAAGAC AACAATGTACCAATGTACCTCGTCAATCATGCAGAAACGTTCCTCAAGAA GTTTGCAACAACGTTCCACGACAAGTATGCAACAATGTCCCAAGACAATC CTGCAGAAATGTTCCTGAACAAGTTTGTAACAATGTGCCAAGACAGTCAT GCCGCAGCGTGCCAAGACAATCATGCAGAAATGTTCCAAGACAGTCATGC AAAAACGTTCCTCAGCAAGTTTGCAACAATGTTCCACGACAAAGCTGCAA TAATGTTTGCCAAGATGTTTTCTGGTGCAAGGTTTGCAACTAA
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