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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s245 | supercontig | LSalAtl2s245:640036..644746 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004690 >EMLSAP00000004690 ID=EMLSAP00000004690|Name=EMLSAP00000004690|organism=Lepeophtheirus salmonis|type=polypeptide|length=995bp
MKLCDDGAALPTPVSLVEPVPMNVRALDVSGDALSLTWDYPPVEELRGFR
IFIEHEDLKDVKSISTSESPPLNISHLEPYSLYRIWVKGLYEVEGSGSGS
GEDGTQEXKEDLRETEKSDSIQVHTDVKAPGIPLLSNASCYGTNQIWISW
SRPEKFTKTIDTYLIYYREFVYKDDRVTSFQNSLDFFKQLEVEAGSGDEE
SFIIEGLEGKTTYAIRVQASTESIVFENISFRGDFSQQMLVYLPEEDCEE
PPVSPFGDEEGELSAGMIAGTIFSAIFLLLQYFKAAYYYLDGDPPRVVAP
VGIPDWEGEPGPDGEKGPVMVDDFPSHVTKLHADSDIGFSKEYDEIQKYS
CTIVNATHEHSSHPDNKCKNRYLNIVAYDHSRVQLAPISGYKKTSDYINA
NYIDGFQKFHSYIGTQGPLDETFDAYWRMIWEQNVYVIVMITNLMERGRR
KCDLYWPKEVNSSEVYGHIEVHLAKEEVMANYTIRVMKIKHLKDTGEKVN
TLRKKKWASSDREILQYHYTSWPDHGVPAHPLPVLSFIRRSSRSNPPDGG
PIIVHCSAGVGRTGTYIVIDAMLQQITTKYELNIFGFLRHIRGQRNHLVQ
TEEQYVFIHDALLEATRSCITEIPKDKIVNFIDILMKKDIISKINLLQRQ
FKLITSFEPNDFHFMSSRKSYNVSKCRDSNLIPVESFRVALSPKPGVEGS
DFINATWLHGNSKLREFVITQHPTAETKEEFWSMLWDHNAQTVVLLSPID
SDEFPVFWPTRDEEFDQECFKVRFIEEAIHEGHSTYDLVISSRHDDYELE
VRIIHCPDWPSLTRGFAVLKLVQDWHLEYQDGPLVVVDKCGGTDAGTFCA
LTTLCKQLETDNAIDVYQVGKLYHNARPGLWKTEEDIMHMYKVMAXLIXS
NIXNPLHGDESSSYITTTTQAAPAMAIPTSNGNINGSAIPERRHSASDCQ
SSSCSLSKSGGGSSTITNNNKDTAVNRRHSLPGGTPLLESEDSSS back to topmRNA from alignment at LSalAtl2s245:640036..644746- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004690-700537 ID=EMLSAT00000004690-700537|Name=EMLSAT00000004690|organism=Lepeophtheirus salmonis|type=mRNA|length=4711bp|location=Sequence derived from alignment at LSalAtl2s245:640036..644746- (Lepeophtheirus salmonis)
ATGAAGTTATGTGATGATGGTGCAGCTCTTCCAACACCTGTCAGCCTCGT
GGAACCTGTCCCTATGAATGTAAGGGCCTTGGATGTATCCGGTGATGCTT
TGAGTTTGACATGGGACTATCCTCCTGTGGAAGAGCTTCGTGGGTTCAGG
ATCTTTATTGAGCATGAGGACTTGAAGGATGTGAAGAGTATCTCTACGAG
TGAGAGTCCTCCTCTCAACATTTCGCATCTCGGTAGCTAAGGAACCCCAG
AAGTGTGTGAATAAGGCGAGTCTGAACTCAGAGTTGCCCTTTTTTCTTGA
TATTTCAGAGCCGTACTCTTTGTATAGGATTTGGGTCAAAGGTCTCTATG
AGGTGGAAGGGAGCGGGAGTGGGAGCGGAGAGGATGGGACTCAAGAAGMC
AAAGAGGATTTGAGAGAAACGGAGAAATCCGACTCCATCCAAGTGCATAC
AGATGTGAAAGCCCCCGGAATCCCTTTGCTGAGCAATGCATCATGCTACG
GAACGAACCAAATATGGATTAGTTGGAGTCGCCCGGAAAAGTTCACCAAG
ACGATCGACACCTATCTTATTTATTATAGAGAATTTGTCTATAAAGATGA
TAGAGTGACCTCCTTCCAAAATTCATTGGATTTTTTTAAGCAGTTAGAAG
TAGAAGCCGGCTCTGGAGATGAAGAATCTGTAAGTTCATTCCGTTCTTGA
AAATGAATATTTATCAGAGTAAAATGTGTTTTTTTTAAAGTTCATTATTG
AGGGATTAGAGGGTAAAACAACTTACGCAATTCGTGTTCAAGCCTCTACA
GAAAGTATTGTTTTTGAAAATATTTCATTTAGAGGAGATTTTTCACAACA
AATGCTTGTGTATTTACCTGAGGAGGATTGTGAAGAACCACCTGTGAGCC
CCTTTGGAGACGAAGAAGGAGAATTATCCGCTGGGATGATTGCTGGAACG
ATTTTTTCTGCAATCTTTCTTCTCTTGTCAGTTGTTGGCTTTGTGTTGTG
GCGGMAAGTTAACAATTTAGAGGACTTATACTCATAACTTATTACTCCTT
TATAGGCAATATTTCAAAGCAGCATATTATTATTTGGACGGAGATCCTCC
AAGAGTCGTTGCACCAGTTGGGATTCCTGATTGGGAAGGAGAGCCTGGTC
CTGATGGTGAAAAAGGTCCCGTCATGGTTGATGATTTTCCAAGTCATGTT
ACTAAACTTCATGCGGATTCGGATATAGGCTTCTCAAAAGAATACGATGA
AATTCAAAAGTACTCCTGTACAATAGTCAATGCCACGCATGAACATTCTT
CACATCCGGATAATAAATGCAAAAATCGTTATTTAAACATTGTTGCCTGT
AGGATAATCCCCTCTCCAGTTCTGAATATTTAATTAATAGTATACTCTTT
CTTTATTTAATGGAAAAAAGACGATCACAGTAGAGTTCAGTTAGCTCCCA
TTAGTGGTTACAAAAAAACTTCAGATTACATAAATGCAAACTATATCGAT
GGATTTCAGAAATTTCATTCGTATATTGGTACACAAGGTCCTTTGGACGA
AACCTTTGATGCATATTGGAGAATGATTTGGGAACAGAATGTTTATGTTA
TAGTGATGATTACAAATTTAATGGAGAGAGGAAGGGTAATAAAAATAATT
AATTAGTAATTTGTATATATTAAAAATATACCTTGCAGAGGAAATGTGAT
TTATATTGGCCAAAGGAAGTAAATAGTTCAGAAGTATATGGCCATATTGA
AGTGCATTTGGCAAAGGAGGAGGTTATGGCCAATTATACAATTAGAGTTA
TGAAAATCAAGCATCTAAAGGTAAGAAAAATATTTGTTTTAGTATCTTTC
GAGGTTATCTTATTAATACATGATCAAAAATATGAAATATGTACTTAAAT
AGACATGTATATAAATACGTTGACATAAAATGATAATTAATTAATCAATA
CTCAATACTAATTGGTTGTTGACTAATCAAGAAGGTACGTTCCAACTGTT
TACAGCTACTACTTGATCTTTATGAATTATGATAGATACAATTCATTAGT
CATTCAGTTTATCCTAATTCCTTTCGATTTGAATAGCATACTTGTGTGTA
TTCACAAATTGTTGATCATTTCGAATATACATACATAAATTAAAAGAGTT
GCATCATTTTGGAAAGTTTTTAAGAAAGAGAGAAAAAAAAATATATCACA
GATGTAGAGCAATTATTATGTTATGGCTATACATATATTAATTATTTTAT
TCCTTACGTTATACTTGACACGACGAATTATGACTACATAATATACTAAT
GAAGATAACCTTGAAAACAAATGTTATATTTTGAATAATCATATTTAAAA
AAATATATGCTTTACTTTAACATTCAAATCATTTAAATTCATAGGATACA
GGTGAAAAAGTAAACACGGTACGTTGATCGACATATAATCAATCTTACTT
TTATCTTTCTGAGAACGTCTATTATTATTGCCCCCCCACCCCTCTCTCTC
CCCGTTCTTTTTATCATACCTCACTGTCCCTTATTGCATGATTAATTTAT
TACTTACTATTAGTGATCCCTTTCAAATTTTAATCATTATTTTTTTTGTT
GCATTTTTGTCTTCTTAATCCAAAAACATGTTAGAAACCTTTAGATAATT
TGTTTGCATGAGTAAATTTTAATCTGTCCGTAGTGTGTAGTCCAGTTTTA
ATTTATTATCTCTATGCCTTTTTCGTTAGTCAATTGTACGCATAGTTTTA
TGCATAAATTACACATGAAATATTAGCAATTAATAAAGTTAACTTCTTCT
TTTTACCATTTTTTATATCTGCAGCATGAAGTGAAATAATTGAGACTGAT
GTGAATCACTTTTTTTATTGTCTAGAAATGATTACTTCAATTTGTGTCCC
TTGCCAATTAAAAGTTAATTCCTTACATTGTGTTTTATTAAAAAAGATTT
CTTATTTAAAAAAAAAGTTTGAGTTAATACCTAGGATATGAGTCGACGTT
TTTTTATCTTTTTAAAATGTAATTTTCCTTCAATTTTAGTTGAGGAAAAA
GAAATGGGCTTCATCTGATCGTGAAATACTTCAATACCACTACACTAGTT
GGCCGGATCACGGAGTTCCAGCTCATCCTCTTCCTGTTTTGAGTTTTATT
CGACGATCTTCGAGAAGTAATCCGCCTGACGGAGGCCCCATTATTGTACA
TTGTAGTGCAGGKGTGGGTCGAACAGGAACTTATATTGTTATTGATGCTA
TGCTTCAACAAATTACTACTAAATATGAGCTCAACATTTTTGGCTTTTTG
AGGCACATTCGTGGTCAAAGAAATCATCTTGTTCAAACGGAGGAACAGTA
TGTATTTATACATGATGCTCTTCTTGAAGCAACAAGATCATGTATTACTG
AGATTCCCAAGGACAAAATAGTTAATTTCATTGATATCCTTATGAAAAAA
GATATTATTTCTAAAATTAATTTACTTCAAAGGCAATTTAAGGTAAAATA
AACGCCCAAGCCGTTTGTCCCTTTTTTATAAAATATAATTATTCGATATT
TCAGTTGATTACTTCGTTTGAGCCCAACGATTTTCACTTCATGTCCTCTA
GGAAGTCTTATAATGTATCAAAATGTAGAGACTCAAATCTGATTCCTGTT
GAATCTTTTCGCGTTGCTTTGTCTCCTAAGCCTGGTGTGGAAGGCTCTGA
TTTTATTAATGCTACTTGGCTTCATGGCAACAGCAAACTTCGTGAATTTG
TCATTACTCAGCATCCCACGGCAGAAACTAAAGAAGAATTTTGGAGCATG
CTTTGGGATCACAATGCTCAAACTGTCGTATTACTTTCACCTATTGACTC
TGATGTAAGAGTTGTATTCTTTTATAGTAACTTTGTTTGTTAGTTATAAT
TTGAATTATCTCGTATTAAGGAATTTCCCGTGTTTTGGCCTACCAGAGAT
GAAGAATTTGATCAAGAATGTTTTAAAGTCAGATTCATTGAAGAAGCGAT
TCATGAGGGTCACTCCACTTATGATTTAGTTATATCCTCTAGACATGATG
ATTATGAACTTGAAGTAAGAATTATTCATTGTCCAGACTGGCCAAGCCTT
ACCCGTGGATTTGCTGTACTAAAGTTGGTTCAAGATTGGCACTTGGAATA
CCAGGATGGTCCTTTGGTTGTGGTTGATAAATGTGGAGGTACGGATGCAG
GGACCTTTTGCGCTCTTACCACGCTTTGTAAACAATTGGAGACGGATAAT
GCAATAGATGTGTATCAAGTCGGTAAATTGTATCATAATGCAAGGCCTGG
TCTTTGGAAAACTGAAGTATGAAACTATCTTCGATATCTAAAAATGATAA
TTTATAATTTTTTTTGTTTTGTTTTTAGGAGGATATTATGCATATGTATA
AAGTAATGGCGGYTTTAATTTRTTCGAATATTMAGAATCCATTACATGGG
GATGAATCATCTTCATACATTACAACAACAACTCAGGCAGCTCCTGCGAT
GGCTATTCCTACATCGAATGGAAATATTAATGGAAGTGCTATACCGGAAC
GCCGTCATTCCGCTTCTGATTGTCAATCTTCTAGCTGTTCTCTCTCAAAA
TCCGGAGGTGGTTCATCGACTATAACTAATAATAACAAAGATACTGCTGT
GAATAGGAGACATTCATTACCTGGAGGGACTCCTCTTTTGGAATCTGAGG
ATTCATCTTCT back to top
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