EMLSAT00000004698, EMLSAT00000004698-700545 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004698
Unique NameEMLSAT00000004698-700545
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2472supercontigLSalAtl2s2472:13652..15895 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004698 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004698EMLSAG00000004698-687464Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020509EMLSAE00000020509-729437Lepeophtheirus salmonisexon
EMLSAE00000020510EMLSAE00000020510-729438Lepeophtheirus salmonisexon
EMLSAE00000020511EMLSAE00000020511-729439Lepeophtheirus salmonisexon
EMLSAE00000020512EMLSAE00000020512-729440Lepeophtheirus salmonisexon
EMLSAE00000020513EMLSAE00000020513-729441Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769128auto769128Lepeophtheirus salmonispolypeptide
EMLSAP00000004698EMLSAP00000004698Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004698

>EMLSAP00000004698 ID=EMLSAP00000004698|Name=EMLSAP00000004698|organism=Lepeophtheirus salmonis|type=polypeptide|length=630bp
MALVSLFVSTLFLLQLAAGDSCYFPVPFQGEFLTQSLTSRDIAYTSVSIL
FDSIPTWGTCHRRIGHHVILQSSSNSTSVRHGSSSSRRRRRRRGNQSSST
HCFKCISLVPRSENVLHVHTHSLDICYSSEKEALDSCPSASDIRHRSATE
IMLYKTRGFYGKSAITKTYCPLNGRYRFTYSINDGTEDELECNESLSTAG
DCPSGYKFDLHFKGCSFPDLEMSFQCLASWEGENGDTYLSLLDTKLPQLG
EEPRPRYRCGXKDPVSGQTHLALSSDSTCVHHLYSSQDGYETLHLSRIMD
NDADTTGVLLPSSPECTFPSWIQGKWNGIEVKGGRFTYRDEENFVTYRGT
CLSYSEHQFSVALETDCGQTFYACVDFAQRDTNVMEFRLGKTRGGTCTLP
DKRLTFGRLNPSRPFLCPLKGEFTGVIPDAEGLCAKSYADCSNPEIMFHT
VFNCYNVTEIYEQREYRCFGQWEEDGLVYTYTERLDLPGTECFVGVHIDD
DRNVVTEAGSNCERGHQPMKYGMTLNRQRKCPSSQEETILRDLIRQEGRL
DSSPTPRNVSPKLSTVFSVVIKPDEDYDHNNNVFSANEIPGSSGRSSGGS
PSGINSTNPPFLLLIVMTISLLISGQHPSL
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mRNA from alignment at LSalAtl2s2472:13652..15895-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004698-700545 ID=EMLSAT00000004698-700545|Name=EMLSAT00000004698|organism=Lepeophtheirus salmonis|type=mRNA|length=2244bp|location=Sequence derived from alignment at LSalAtl2s2472:13652..15895- (Lepeophtheirus salmonis)
ATGGCGTTAGTGAGTTTATTTGTGTCTACGTTGTTTTTACTACAATTAGC
CGGTAAGTTGTATTACAAATATTATTTCTTTATATAATAATTTGCATTAG
CGGAATTTCAAGACAGNNNNNNNNNNNNNNNNTTTGCATTTACAGCCGGT
GATTCATGTTACTTCCCAGTTCCCTTCCAAGGAGAGTTCCTAACACAGTC
TCTGACAAGTCGAGACATTGCTTATACATCCGTCTCCATCCTGTTTGACT
CCATTCCAACATGGGGCACATGTCATAGACGGATTGGCCATCATGTCATT
CTCCAGTCCTCTAGTAATAGTACCTCTGTCAGACATGGGAGTTCGAGCTC
TCGCCGTCGACGGCGAAGGAGAGGAAATCAGTCCTCCTCCACCCATTGCT
TTAAATGCATCTCTCTAGTCCCTCGCTCAGAGAACGTACTCCACGTTCAC
ACACACTCATTAGACATTTGTTATTCCAGTGAAAAAGAGGCTCTGGACTC
GTGTCCCAGTGCTTCTGACATTCGCCACCGATCTGCAACAGAGATCATGT
TGTATAAAACGCGTGGCTTCTACGGTAAAAGTGCGATTACCAAGACTTAT
TGTCCACTCAATGGACGCTATCGCTTTACTTATTCCATCAATGATGGAAC
AGAGGATGAGTTAGAGTGTAATGAATCCCTCAGCACGGCTGGAGATTGTC
CCTCTGGCTATAAATTCGATCTTCATTTTAAGGGATGCTCCTTCCCTGAT
TTAGGTAAGACTCTTTCAATCAGTATTAAAGCATTATTGCATCATTATGT
TTACAAATATTTTATTATGAGAAACTTACTTAGATATTATATTCAATTCT
ATATTTTTACATTTGTTTAGAAATGAGCTTTCAATGTTTGGCCTCCTGGG
AGGGTGAAAATGGAGACACGTATTTGAGCTTATTGGATACGAAATTACCC
CAATTGGGGGAAGAGCCACGACCAAGATACAGATGCGGGGMAAGTCCTTC
ATAATCCCTTTTTAATCATCATTTCCTACTGTTTTATATTCTTTACTTAG
ATCTTCAAAGAGGACCCAGTCTCCGGGCAAACACATTTGGCTCTATCATC
AGACTCAACCTGCGTTCATCATCTCTACTCCTCTCAAGATGGATATGAAA
CACTTCATCTATCTAGAATTATGGATAATGATGCAGACACTACGGGTGTT
CTTCTTCCCTCTAGTCCAGAGTGCACCTTCCCATCCTGGATTCAAGGCAA
ATGGAACGGAATTGAAGTCAAAGGGGGTCGCTTCACTTATCGGGATGAAG
AGAACTTTGTCACTTATCGTGGAACATGTCTCTCCTACTCTGAACATCAG
TTTTCTGTTGCTCTTGAAACAGACTGTGGACAAACGTTCTATGCTTGTGT
TGACTTTGCTCAACGGGACACCAATGTCATGGAGTTCAGACTAGGTACGA
CCTCATTAATAGCTTTTGATTTCCCTCGACACTCTTCTTACGTTTTATTT
TTTTATTTTGCGGTTACAGGTAAAACCCGAGGAGGAACTTGTACACTACC
AGATAAAAGACTCACATTTGGACGTCTTAATCCAAGCAGACCTTTTCTCT
GTCCCCTTAAAGGAGAATTCACGGGTGTCATCCCAGATGCAGAAGGACTT
TGTGCCAAATCCTACGCAGACTGTTCTAATCCAGAAATCATGTTTCACAC
AGTGTTTAATTGTTATAATGTTACCGAAATCTACGAACAGCGAGAGTATC
GATGCTTCGGTCAGTGGGAGGAAGACGGGCTTGTCTACACATATACAGAA
CGACTTGATCTCCCAGGAACAGAGTGTTTTGTGGGTGTACACATCGATGA
TGATCGAAATGTCGTAACAGAGGCCGGCTCTAATTGTGAGCGAGGACATC
AGCCTATGAAATACGGCATGACGCTCAATCGTCAACGCAAGTGTCCCAGC
TCCCAAGAGGAGACCATCCTACGAGATTTGATTCGTCAAGAAGGACGACT
CGACTCTTCTCCAACACCACGGAACGTTTCTCCTAAACTGTCTACGGTGT
TTAGTGTTGTGATAAAACCAGATGAGGACTATGATCATAATAATAATGTT
TTCTCTGCAAACGAAATCCCTGGATCCTCTGGACGATCCTCAGGTGGATC
TCCTTCAGGGATCAACTCAACGAATCCCCCCTTCCTTTTACTCATTGTGA
TGACAATCTCATTACTTATCTCTGGACAACATCCTTCTTTATGA
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