EMLSAT00000004730, EMLSAT00000004730-700577 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004730
Unique NameEMLSAT00000004730-700577
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s249supercontigLSalAtl2s249:293859..295157 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004730 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004730EMLSAG00000004730-687496Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020681EMLSAE00000020681-729609Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775990auto775990Lepeophtheirus salmonispolypeptide
EMLSAP00000004730EMLSAP00000004730Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004730

>EMLSAP00000004730 ID=EMLSAP00000004730|Name=EMLSAP00000004730|organism=Lepeophtheirus salmonis|type=polypeptide|length=432bp
MSLSSALVEDDWLKPLVEDLGLSGDDYLKWDDLAFLDLATPQSKSKVHPD
LFFDSTGLFDGDYFEKGAAGALLDLFPSSSTHAEEGAEKLLEDLIEPSPA
TQPPPLVVPPLVSSVHDTASNEPASTLPEQPPPVVTSVAKGADEAGGRIT
LGGIKTLPVDSIPKDALAKISIQRNAREKTTTISVLTPDGXSGNSYQVNT
LNVLXAIEALKPLNLDKLIFSQTKLHKTMPPPPSTIQQHQQQQMSSLLLS
SSSFSSSRQSSKSMTKKDSDRIELHVNESESSSVLVEKVQDSSTAAFIKH
FHYRGISINALFRIKSSPRYWICPTQDCKKGFSKLSLLKVHLYEHYGIRP
FECPIPGCKWSFKTPFKLKRHQRTHNTKDSLCKKRFICNYCNAGFNTARN
LGVHLKSHESSFSSSLTTLLTERQDDHFLYDL
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mRNA from alignment at LSalAtl2s249:293859..295157+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004730-700577 ID=EMLSAT00000004730-700577|Name=EMLSAT00000004730|organism=Lepeophtheirus salmonis|type=mRNA|length=1299bp|location=Sequence derived from alignment at LSalAtl2s249:293859..295157+ (Lepeophtheirus salmonis)
ATGTCTTTGTCCTCGGCTCTCGTAGAAGACGACTGGCTCAAGCCTCTGGT
AGAGGATTTAGGACTCAGTGGGGATGATTACTTGAAGTGGGATGATTTGG
CATTTTTGGATCTTGCCACGCCTCAAAGCAAGTCCAAGGTGCATCCAGAC
CTCTTTTTCGACTCCACGGGGTTATTTGATGGGGACTACTTTGAGAAGGG
AGCGGCAGGRGCTCTCTTGGATCTGTTCCCATCATCCAGCACTCATGCTG
AGGAAGGGGCTGAAAAGCTCCTTGAAGATCTTATTGAGCCCTCGCCCGCA
ACACAACCCCCACCACTTGTAGTTCCTCCTCTTGTCTCTTCCGTACATGA
CACTGCGTCGAATGAACCGGCGTCAACACTGCCAGAACAACCTCCACCTG
TCGTGACCTCTGTTGCCAAAGGAGCAGATGAAGCAGGAGGGAGAATCACA
CTGGGTGGCATCAAGACCCTACCTGTAGACTCCATACCCAAGGATGCCCT
TGCCAAAATATCGATTCAAAGAAATGCAAGAGAAAAAACTACAACCATCT
CCGTTCTTACTCCAGATGGAMCCTCCGGGAACTCTTATCAAGTCAATACT
CTCAACGTCTTARAAGCCATTGAGGCTCTCAAACCCCTCAACTTAGACAA
ATTGATTTTTTCTCAAACCAAGCTACACAAAACAATGCCGCCGCCGCCTT
CTACTATCCAACAACATCAGCAACAACAAATGTCGTCCTTGTTGTTGTCG
TCCTCATCATTTTCATCGTCACGTCAATCCAGCAAATCCATGACCAAAAA
AGACTCCGATAGAATAGAGCTTCATGTTAATGAGTCCGAGTCCTCCTCTG
TCCTTGTAGAAAAAGTACAAGACTCATCCACTGCAGCCTTTATTAAACAT
TTTCATTATCGGGGAATCTCAATTAATGCTCTTTTTAGGATCAAGTCATC
CCCTCGATATTGGATCTGTCCCACTCAGGATTGTAAAAAAGGATTTTCGA
AACTTAGTTTGCTCAAAGTTCATTTATATGAGCACTACGGAATTAGACCC
TTCGAGTGTCCTATCCCTGGGTGTAAATGGAGCTTTAAAACTCCTTTTAA
ATTGAAGCGTCATCAAAGAACACACAATACTAAGGATAGTCTATGCAAAA
AAAGATTTATATGCAACTATTGTAATGCTGGATTTAACACGGCTCGTAAT
CTAGGAGTGCACTTGAAATCACACGAGTCAAGCTTTTCTTCCTCTTTAAC
CACGCTTTTGACAGAAAGACAAGATGACCATTTTTTATACGATCTTTAA
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