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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s250 | supercontig | LSalAtl2s250:727924..732357 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004765 >EMLSAP00000004765 ID=EMLSAP00000004765|Name=EMLSAP00000004765|organism=Lepeophtheirus salmonis|type=polypeptide|length=810bp
MPRVMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARW
FEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTASQCLERY
ESLLDRXXAKESGDTTSSSAPPGERNKLKPGEIDPNPETKPARPDPRDMD
EDELEMLXEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAG
VKVKLRYIKKGRMDYNAEVPFEKRPAIGFYDTAKEIQQEETDALDMSKGL
RQHQLELKRRDEEENKLRKKDKEKRKENEIPKAIFEDDEPDRKRSKLVLP
EPQISDTDMEQIVKLGRASEAAKESVSSDALLADYNVTPGPSLASRTPRT
PMPQGDKVLQEAQNIMALTNVDTPLKGGVNNELIENGGNFSGVTPGKDSV
RTPNTVLTTPFRTKEGQMGLTPGNRMTPSGVSISGGTPLRDKLSINPDGS
LDEGSGTTYENGEAKQVLRMGLSSLPQPKNDFEIVVPQEEEDDNEVEMQD
DDNTYIEDQADVDQQTEEEYRKKREADFRKRSQAVQRSLPRPLDVNHSVL
RPLNSEPPLTDLQKAEELIKREMIVMLHHDSLETPTNAQMGQDDNKGSCK
KKERFIHNESVHRSYISKYPYHNFTDEEMSNAKDLLASEMEVVKKGMGHG
DISLEAYTQVWEECLXQVLYLPSQSRYTRANLANKKDRIESHEKRLEQNR
QHMCKEAKRAGKIEKKLKILTGGYQSRAQAQIKQVQDLEDQIEQSRLEMS
TFEFLKNQEISAIPQRLFSIQEDVDRQTKREKELQEQFYACSLEYEELTT
TKLGYVDDVH back to topmRNA from alignment at LSalAtl2s250:727924..732357+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004765-700612 ID=EMLSAT00000004765-700612|Name=EMLSAT00000004765|organism=Lepeophtheirus salmonis|type=mRNA|length=4434bp|location=Sequence derived from alignment at LSalAtl2s250:727924..732357+ (Lepeophtheirus salmonis)
TGGATTGAAATTCTGAGGAAGAATCCGGAATAATTAATAAATACTAGAAC
TAAACAGTCGTGGATTATTAATTGGATTGTTATCGAGTTTGGAGAAGTGT
AAGTGTGGGAAGTGGTAAATACTAAATAGGAAAGATGCCGCGAGTGATGA
TAAAGGGAGGTGTCTGGCGGAACACGGAGGATGAGATCCTCAAGGCGGCC
GTGATGAAATATGGTAAGAACCAATGGTCCCGTATTGCGAGTCTTCTGCA
TCGTAAATCCGCGAAGCAATGTAAGGCCCGTTGGTTCGAGTGGTTGGATC
CGTCCATCAAAAAGACGGAATGGTCCCGCGAGGAAGATGAGAAACTGCTG
CATTTGGCCAAGCTGATGCCCACCCAATGGCGGACAATTGCACCCATTGT
GGGAAGAACAGCTTCTCAGTGTCTGGAGCGATACGAATCCCTCTTGGATC
GTSCAMAAGCCAAAGAGTCTGGGGATACGACGTCCTCTTCTGCTCCGCCC
GGGGAACGGAATAAATTGAAACCAGGGGAAATCGACCCCAACCCGGAGAC
GAAGCCCGCTCGGCCGGATCCCCGAGACATGGATGAGGATGAGCTTGAGA
TGCTGAGKGAGGCTCGYGCTCGMCTCGCCAATACTCAAGGGAAAAAAGCT
AAAAGGAAAGCACGAGAGAAGCAGTTGGAAGAGGCAAGACGCTTGGCTGC
TCTGCAAAAGAGGAGAGAGCTCCGAGCTGCAGGAGTTAAGGTCAAACTCC
GTTACATCAAAAAAGGGCGCATGGATTATAATGCAGAGGTTCCCTTCGAA
AAAAGACCCGCTATTGGCTTTTATGATACCGCCAAAGAAATACAACAAGA
GGAAACAGATGCCTTGGATATGTCCAAAGGTCTTCGACAACATCAACTAG
AGCTCAAACGGAGAGATGAAGAGGAGAACAAATTGAGAAAAAAAGATAAA
GAGAAGCGAAAGGAGAATGAAATACCAAAAGCTATATTTGAAGACGATGA
ACCCGACCGAAAGAGAAGTAAATTGGTTCTTCCGGAACCACAGATCTCTG
ATACTGACATGGAGCAAATAGTAAAGCTTGGAAGAGCTTCAGAAGCAGCC
AAGGAAAGCGTATCTTCAGATGCTCTTTTGGCCGATTACAATGTTACGCC
GGGTCCATCCTTAGCAAGTCGAACACCAAGAACACCTATGCCACAAGGAG
ACAAAGTATTACAAGAAGCACAAAATATAATGGCTTTAACAAATGTTGAT
ACTCCTCTTAAAGGTGGTGTTAATAATGAGTTGATTGAAAACGGGGGTAA
TTTCTCTGGAGTAACACCTGGAAAAGACTCTGTCCGCACTCCGAACACAG
TTTTAACTACTCCGTTCAGAACGAAAGAAGGTCAAATGGGGCTCACCCCA
GGTAATAGAATGACTCCGAGTGGAGTTTCAATCTCAGGTGGAACGCCTCT
CCGTGACAAATTATCTATAAATCCAGATGGATCATTGGATGAAGGTTCAG
GAACGACCTATGAGAATGGTGAAGCTAAACAAGTTTTAAGAATGGGACTA
AGTTCTTTACCTCAGCCGAAAAACGACTTTGAGATTGTTGTCCCACAAGA
AGAAGAAGATGATAATGAAGTTGAAATGCAAGATGATGACAACACATACA
TTGAAGATCAAGCTGATGTAGATCAACAAACGGAGGAAGAATACAGAAAA
AAACGCGAGGCCGACTTCAGGAAGCGAAGTCAAGCAGTGCAACGGAGTTT
ACCCCGTCCCTTAGATGTCAATCATAGTGTATTACGACCTCTAAACTCTG
AACCTCCTCTGACAGATTTGCAAAAGGCAGAAGAACTTATTAAACGAGAG
ATGATTGTCATGCTTCACCATGATAGTTTAGAAACTCCAACAAATGCCCA
AATGGGGCAAGACGATAATAAAGGTTCATGCAAGAAAAAAGAGCGTTTTA
TTCATAATGAAAGCGTACATAGATCTTATATTTCCAAGTATCCGTATCAT
AACTTTACAGATGAGGAAATGAGTAATGCTAAAGATCTTTTAGCTTCAGA
AATGGAAGTCGTAAAAAAAGGTATGGGCCATGGTGATATAAGCTTGGAAG
CATATACTCAAGTTTGGGAAGAGTGTCTGKCACAGGTTCTATACTTACCT
TCACAAAGTCGATACACGAGAGCTAATCTAGCGAATAAAAAGGATCGTAT
TGAGTCCCATGAAAAACGCTTGGAACAAAATCGTCAACATATGTGCAAGG
AAGCAAAAAGAGCTGGAAAAATTGAGAAGAAATTAAAAATCCTGACTGGA
GGCTACCAGTCAAGGGCACAAGCTCAGATCAAACAAGTACAAGATCTTGA
AGATCAAATTGAACAATCTCGACTTGAAATGTCTACTTTTGAATTTCTTA
AAAACCAGGAAATATCTGCTATACCCCAGAGACTGTTTTCCATTCAAGAG
GACGTAGATAGACAAACGAAGAGAGAAAAAGAACTTCAAGAACAGTTTTA
TGCATGCTCTTTGGAGTATGAAGAGCTGACGACAACAAAGTTAGGTGATG
AAATTAATACCATTAAAGATGGCGAGAGCTCTAAAGGATAGAACTTGATT
TGACTAAGTGATTTATTTAATTGTGACCACTTTTTTTTCATACTTTTTAA
TACTTCAACGTTGGTTAAGGAAATTATTATTATTTATCACTTTGGCAGTG
ATGCATTGTCTTTTTTATCCTTAATGATTCACTTAAAATAAAGACTATTT
CAATAATTAATTATGTATCAACAAATGAACACAATAAGTCGGATTTGCAT
CTTTTATGCAATCTGTTCATATTATTAACTGCAAGATACACCTTTCCCTA
TATTTAAAAAGTTAACTTATTGTTCTAAATATATAATTATTAAAGATTAT
AATCCACATGAGGTTAAATAACTTGTTTTTTTATTTAAAGTATTATTATC
CTTGTTGATCATTATCAATTTGATTATTAAATTTTAAGGATATGTCGATG
ATGTCCACTAAAAAAGTCTACAACATGGTGCTGAGATGTAAGAGTACAAT
ATCTGCTTGGAGATTACACGAATACAATGGTCCAACGCCTAGTCTCAAGT
TGGATAAAATACCTTTTCCAAGGATGAATTCACCCAATGAAGTTATTGTC
AAAGTTCATGCAACTAGTATCAACCCCCTGGACGTCATGATGGTAAAAGG
CTATGGGAAAAAAGTTATAGGGACATTGCGATCCCTCGGGGAGAACCATA
ATAATGCTCCTTTTACACTTGGACGAGACTTTTCGGGAACAGTCTTCGCT
AGAGGAGGCAATCTATTGAACAAGTATAAAGTAGGAGATGAAGKATGGGG
AGCAACCTTTCCTTCATTGGAGGGATGTCATGCAGAATACATTACTGTTC
ACAAAGATATGGTAACGTATGAATTAGTGACACCTTAAAGATATATGCTT
GTATCATTATGTTTTGTCACTCTTAAGATGGCAAAAAAACCAAAAGGATG
CAGCCATGTCGAAGCTGCTTCAATTCCCTACGCTGCATTAACTGCATGGT
CTGCTCTTAGTCTGACAGCACTAACTCAGAAGGGATGGAATACTTTGGTC
ATAGGAGCTGCTGGTGGAGTAGGATCATTGGCAGSTCAAATTTTKAAGTC
GTGGGRCTGTGRTGTTACAGCTGTGTGCTCAACAGATGCTTTACCATTAG
TAACAGGACTCGGCGTCGACAGAGTAATTGACTACAAGGACAACGATTTT
ATGGATAAATTGAGTAAATTAAAAAAGTAGGTAGCGCGTAGCCACATCTA
ATATTATATAATCCGAGATTGTTCATCCATTGTCATTTCCAGATTTGATG
TAATATTGGACTGTACAGACTCCCAGGATAATTATAAGTCTTATATGAAT
TTATTGAATAAGAGTCCACATTCTAACTATGTAACATTATCAAGTCCAGT
ACTATCATCAACGGACTCTCAAGGATTTGTGTCAGGAATAGCTAGCAGCG
TAGGACAACTTATATGCAAAAATACAACTCCAGGATCTTATCGCTGGGGA
TACTTTACGCCAAATCAAAAAGCTCTGAAGTCATTGTCTGATCTAGTCGA
AAATGGAAAGTTAGTAGCCCTAGTAAATGAAACCTTTGGATTTTCTGATT
TGATAATAGGACATGGCAAATTACATGAGGGTCATGCAAGGGGAAAAATA
GTCATCGATCTAGAAAAATGAACTTATAACCTACTAAGGCGCTAAATTAC
AAAAACACAAATAAATTATTTTACATGATATATTCATAATAAATATAAAT
AATTACGGAAAAAATTAGTATTATAATAATTACAGTATAGCGTGGAATAC
AGATTGAATCTATGTATTTTCAATTACATAATAAGGATAATATGAGTAAT
ACAAATCTAGTCGATAAAGATATAAAAGAAAAAA back to top
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