EMLSAT00000004772, EMLSAT00000004772-700619 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004772
Unique NameEMLSAT00000004772-700619
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s251supercontigLSalAtl2s251:1009087..1012390 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004772 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004772EMLSAG00000004772-687538Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020879EMLSAE00000020879-729807Lepeophtheirus salmonisexon
EMLSAE00000020880EMLSAE00000020880-729808Lepeophtheirus salmonisexon
EMLSAE00000020881EMLSAE00000020881-729809Lepeophtheirus salmonisexon
EMLSAE00000020882EMLSAE00000020882-729810Lepeophtheirus salmonisexon
EMLSAE00000020883EMLSAE00000020883-729811Lepeophtheirus salmonisexon
EMLSAE00000020884EMLSAE00000020884-729812Lepeophtheirus salmonisexon
EMLSAE00000020885EMLSAE00000020885-729813Lepeophtheirus salmonisexon
EMLSAE00000020886EMLSAE00000020886-729814Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780249auto780249Lepeophtheirus salmonispolypeptide
EMLSAP00000004772EMLSAP00000004772Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004772

>EMLSAP00000004772 ID=EMLSAP00000004772|Name=EMLSAP00000004772|organism=Lepeophtheirus salmonis|type=polypeptide|length=771bp
MSRRKIVSENGGREEGHLPKKRHEFPSFYQNSSDEEAEDEKPKPTVVAAA
PNLSKYTENATTSSSVXEPGTYSSAAMRIMSKMGHKEGKGLGKAGQGRVE
PVGLSNQRGRHGLGHVIASLDSSNICFEPEREHMEVEETVSWIPSSHIIL
PLPCEESWVTQGPRNETIEDETEFVEPMILEGVVKAKNVFDSLQPEEMRK
SRSRSNPFETINKAIFINRAAVKMANMDAIFDFMFTQPKTPNGDPMIKHD
ELLYFADVCAGPGGFSEYVLWRKKWHAKGFGFTLKGKNDFKTEDFVCGPP
ETFEKHYGADNDGDVFKEKNIAEFTNFVMESTDQKGVHFMMADGGFGVDG
MENIQEILSKQLYLCQFIVALSIVREGGHFVCKLFDIFTHFSVNLVYLMY
KSFEHVSLHKPNTSRPANSERYIICKWKKKDTGPVCGYLLHINRLLNEIA
AYAKDRRLVEVRQKVVRDESLSLWNVPNELRKKPPTIHPKVAVLELVNDS
ILFVKPYVLEVPQDLNKYIKVKFNWFGMFVGESSERTFYYGQGRSNLTQR
REWHKVDQDTLRIELPRGTLIYAEITKEIRGIQKSQKKVHAFHIIDALYL
GEEDVRRRPIEDRNKAIKLFIKALNKRTQPSSTIMRSKHLFCFEKLEQEL
SSLSLKNVKGCGSIPRLTSSAINNGSDPFYLPQGMLLFKVVAERYIIGWX
STHQQKYWYNIHSKDSRFECPEDAVAGFEETFKTRLFWQFSSETKVIPEQ
QIDAIDSRIHSSTIFDFIQNK
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mRNA from alignment at LSalAtl2s251:1009087..1012390-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004772-700619 ID=EMLSAT00000004772-700619|Name=EMLSAT00000004772|organism=Lepeophtheirus salmonis|type=mRNA|length=3304bp|location=Sequence derived from alignment at LSalAtl2s251:1009087..1012390- (Lepeophtheirus salmonis)
ATGTCAAGGAGGAAGATTGTCAGTGAGAATGGAGGAAGGGAAGAAGGGCA TTTGCCGAAGAAGCGGCACGAGTTCCCATCCTTTTACCAGAATAGTTCGG ACGAAGAGGCAGAGGACGAAAAACCCAAACCGACAGTGGTTGCTGCTGCT CCAAACCTATCCAAGTAAGTTGTGAAGACTGTTGTTGATCGGAATTAAAG GACAACTCTGTACTTTTATCCTTCCCCTAGATACACGGAAAATGCAACGA CGAGCAGCTCAGTGGASGAGCCAGGGACGTATTCCTCTGCAGCCATGCGG ATCATGTCCAAAATGGGTCACAAAGAAGGAAAAGGCTTAGGTAAAGCAGG CCAGGGACGTGTGGAGCCCGTGGGCCTGAGTAATCAAAGAGGTCGTCATG GATTGGGTCACGTTATCGCCTCCTTGGATTCCTCAAATATTTGTTTTGAG CCTGAGAGAGAGCATATGGAAGTGGAAGAAACTGTATCCTGGATCCCTTC CTCTCATATCATATTACCCCTTCCTTGTGAAGAATCTTGGGTCACTCAAG GACCTCGCAATGAAACAATTGAAGACGAAACTGAATTTGTTGAACCCATG ATATTAGAAGGGGTTGTAAAGGCGAAGAATGTATTTGATTCTCTGCAGCC TGAGGAAATGAGAAAGTCTCGATCGCGTTCAAATCCCTTCGAGACTATCA ATAAGGCCATATTTATTAATCGTGCTGCAGTTAAAATGGCAAACATGGAC GCTATTTTTGATTTTATGTTTACTCAGCCAAGTGAGTTACCTATATATTT TGTTGCTTCAGAATTATCAGTAGCTATAATATCATTCTCTTGCTCTATTT AGAAACCCCCAATGGTGATCCTATGATAAAACATGATGAGTTACTCTACT TTGCGGATGTTTGCGCGGGACCTGGAGGCTTTAGTGAGTATGTATTATGG AGAAAGAAATGGCATGCCAAAGGATTTGGATTTACTCTTAAAGGGAAAAA CGACTTTAAGACGGAGGATTTCGTTTGTGGACCTCGTAAGGAATAGGAAA TTTAAAATATATTTGTTATATATCTTATATATTTTAGCCGAGACATTTGA GAAGCACTATGGAGCGGATAATGATGGGGATGTATTCAAAGAAAAAAACA TTGCAGAGTTCACTAATTTTGTTATGGAGTCAACGGATCAAAAAGGAGTT CATTTTATGATGGCTGATGGTGGATTTGGTGTTGATGGAATGGAAAATAT TCAGGAGATTTTATCCAAACAACTTTATCTGTGCCAGTTTATAGTTGCTT TAAGCATTGTTCGTGAAGGTGGACATTTTGTTTGTAAATTATTCGATATA TTCACTCACTTTAGTGTTAATCTGGTCTATTTGATGTACAAATCCTTCGA GCATGTTTCTCTTCATAAACCAAACACATCTCGGCCCGCAAATTCAGAGA GATATATTATTTGCAAATGGAAAAAGAAGGACACGGGTCCTGTTTGTGGT TATTTACTGCACATTAATAGGCTTTTAAATGAAGTAAGACATATTTCTGG ATATTTAATCTTTATTGAATCTCATTTATTAATAGAAAAATTATGGATTA AATGGTGTTACGTCAAGCTCTACTGATGTCATTGAAATTGNTACCTAGAG ATATTATGTTCAAAGAAACGGAATTTATTGATTATATTATCAAGTCCAAC AACTTACTGGGGGATTGGCAAATCATTGCGCTTACAAAGATTGCCGCATA TGCTAAAGATAGAAGACTAGTCGAAGTGAGGCAAAAGGTTGTCAGAGATG AAAGTCTTAGTTTGTGGAATGTGCCGAATGAGCTTAGGAAAAAGCCTCCC ACTATTCATCCAAAGGTTGCTGTATTAGAGCTGGTGAATGATTCTATTCT GTTCGTCAAGCCCTATGTATTAGAAGTGCCTCAAGATCTCAATAAATATA TAAAAGTGAAATTCAATTGGTTTGGGATGTTTGTTGGTGAATCAAGTGAA AGGACGTTCTACTATGGACAAGGTCGTAGCAATGTATTTTATGTAAGAAA AAAAAAAAAACTCCAAACATTTAGTCAATAATAGTATCTTAAATGCGGTG TGTCAGCAGAAAAAAAAGTCTTGAACGAAAATCAAGAAAATGATTTTCAT TCCCATTTAATTAATTATATTTATAAATATGCATATACACCCCTTTATTA TTTCATATTGGTTAATTATGGGAAATTATCTTAATTTCTTGGATGGATTG ATAAAACTAAGAATATTAGCTATTGTCTGGAGGCTTCATTTGATATAAAA GACTTTAATAGCTCCAAGATAATCTTGCAAATATAATTTATTTTGTACAA TCTTTACGTTCGATTTGTGTCTCCAAATATTTTTTAAATGTAAGTGTTAG GTCCTTCAATTAAGAATACACATGTTATCCAGACAAAAAGCATCCCTTTA ATATTGAYTAGCCATATATTATGCCAAAAGAATATTAATTAACATATTGA ATTTATCTTGGTTAGTTAACTCAAAGAAGAGAGTGGCATAAAGTGGATCA AGACACCTTAAGAATTGAGCTTCCTCGAGGGACACTCATCTATGCAGAAA TAACCAAAGAGATTCGGGGTATTCAAAAGAGTCAGAAAAAAGTACACGCA TTTCATATCATTGATGCTCTTTAGTAGGTATTATATATTTTTTTCTTCCT TTATTATATAAATTTTAAATCCTTATAGCCTCGGCGAAGAAGATGTGAGG CGTCGTCCTATAGAAGATCGGAATAAAGCCATTAAACTGTTTATTAAAGC TCTTAACAAACGAACTCAACCCTCTAGTACAATTATGCGCTCTAAACATT TGTTCTGCTTTGAGAAACTGGAACAAGAGTTAAGTTCTCTTTCTTTAAAA AACGTTAAAGGTTGTGGTTCTATTCCAAGGCTGACATCATCGGCGATAAA TAATGGGTAGGGKATTTTTTAAAGCATTATTTATTTTTTGTATTACGTTT ATTATTTTGCAGTTCGGATCCATTCTACTTACCTCAAGGAATGTTACTTT TCAAAGTGGTTGCTGAACGCTACATCATTGGTTGGAGKAGTACACATCAA CAAAAGTATTGGTACAATATACACAGTAAGGATTCGAGATTCGAATGTCC TGAAGATGCAGTTGCTGGTTTTGAAGAGACCTTTAAAACAAGACTTTTTT GGCAATTTAGCTCTGAAACTAAAGTAATCCCTGAACAACAAATCGATGCC ATTGACAGTAGAATACATTCCTCAACTATTTTCGACTTTATTCAAAATAA ATAA
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